Myxocyprinus asiaticus (Chinese sucker): 127442291
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Entry
127442291 CDS
T08782
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127442291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127442291
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127442291
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
127442291
NCBI-ProteinID:
XP_051556159
LinkDB
All DBs
Position
6:complement(28401070..28414693)
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AA seq
671 aa
AA seq
DB search
MFSLKQNSWFIRKVVIWRAVASVAWSVILLPVTTALFLFFSRFSLFHPIQCLSECTSLLT
ASNTIFCLVVLCGVVLMTGFFNLEFYTLVPSIPCSRIALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVIIGGRYSTLGTPCRIESGELVTCLNEYHLFFLLSGAFMGYSYSFLGVVQNIY
YVSFQPIQQYKYLYFKGSLPKVVKCSVIQSLYSARNFAALYFFFGYAPKAWISSTLNLQI
DSSLPPLDSLTGLLDSSLFYHLLISGTFLYLTWYINVLLFRIYVTEAYSFPVQSTFTEDA
ELCLPKALTEKNTLVMKFLALQDLALLSQHSPTRRLEIFSLSQPGGHPHNWNALINECLS
LMSELTHRLVAHQDAVASNGRFKSQSASSDTKSGSSASSVMSGAEDLPETPRHNIPLRTP
GSVFLKSSVGGVHSALTAPFTPDLDSPFSSPAIRRLAGQQEPQSPWFGTVQSPHIMRRGP
KLWSASTESQANGSPPASPANVPSLPPDNRKPSFLAQWMQNRREQVKSFLAKRVLIVYLF
NKLPEASSQALFADSQAHIWALQGLSYLVASSFSEDRFGVVQTTLPNILSSLVILLEAVD
RHFKLPHASSKPVRTTCSFGDSTYKTLRFALRAALKTSIYRITTTFGEHLNAVKISAEHR
KRLQQFLEFKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctcaaacagaatagttggttcataagaaaggttgtgatatggagggcagtg
gcgagtgttgcatggtcagtgattctcctacctgtgacaactgcgctctttctgttcttc
agtagatttagcctttttcaccccatccagtgtctttcagaatgcacaagccttcttact
gcctcaaacaccatcttttgtcttgtcgtgctgtgtggagtggttctgatgactggcttt
ttcaacctggagttctacaccttggttccttccattccgtgttcacgtatagctctcctg
gggacagtgcttcacccacgacagtgtgtccactctttggtgtactgcaccatggggatg
ctggtaatgtggtgtgcctctgtaatcataggtggacgttatagcactctaggaactcca
tgcagaatcgagagtggtgaacttgtgacctgtctaaatgagtatcatctgttctttctc
ctgtctggggccttcatgggatacagttacagttttctgggagtggttcagaatatttac
tatgtgtcctttcagcccatacaacaatacaagtacctctactttaagggctccttaccc
aaggtagtgaagtgcagtgttattcagtccttgtattcagccaggaatttcgccgctctc
tatttctttttcgggtatgctcctaaggcatggatctccagcacacttaatctacagata
gacagttctcttccaccattggattcattgactggacttctagactcctccctcttctac
cacctgttgatcagtggcacattcctgtacttaacctggtatatcaatgtgcttctcttc
aggatctatgtcacagaggcctacagttttccagtacagtctacatttactgaggatgca
gagctgtgtctacccaaagctctcacagagaagaacactttagtcatgaagtttttggct
ctgcaagacttggctctgttatcacaacattctcccacacgtagactggaaatcttcagt
ctaagtcagccaggtggtcacccccataactggaatgcactcattaatgaatgcctgtct
ctgatgagtgagctgacacacagactggtggctcatcaggatgcagttgcctctaatggc
agattcaagtctcagtctgccagcagtgacaccaaatccggctcttcagccagctcagtg
atgtcaggggcagaggacctgcctgagacaccacgacataatatcccactcaggactccc
ggatcagtcttcctcaagtcatcggtggggggcgtgcacagcgcgctgactgctcctttc
accccagatctggacagccccttctcctcccctgctattcgccgcctggctggccaacag
gaaccccagtctccctggtttggcactgtgcaaagcccccacatcatgaggagaggcccc
aaattatggagtgcctccacagagtctcaggccaatggcagtcctcctgcctcccctgcc
aatgttccgagtcttcctccagacaatcggaaacccagctttctggcccagtggatgcag
aacaggagagagcaggttaaaagctttttggcaaagcgggtgctaatagtgtatttattt
aacaagcttccagaagcctctagccaagctctgtttgctgacagccaagctcatatctgg
gctctccaaggactatcttatctggtggcgtcctctttctccgaggaccggtttggagtg
gtgcagactacattaccaaacattctcagcagcttggtaatcttgttagaggctgttgat
agacacttcaaactgccccatgcctccagcaaacctgtgaggactacctgcagttttggt
gactccacctacaaaactctgaggtttgcactgagagctgcactaaagacatctatatac
aggataactaccacttttggagagcacttgaatgctgtgaagatatcagcagaacatcga
aaaaggcttcagcagttcttggaattcaaagagtag
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