Myxocyprinus asiaticus (Chinese sucker): 127442317
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Entry
127442317 CDS
T08782
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127442317
09122 Translation
03013 Nucleocytoplasmic transport
127442317
03015 mRNA surveillance pathway
127442317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127442317
03041 Spliceosome [BR:
masi03041
]
127442317
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127442317
Spliceosome [BR:
masi03041
]
Complex C
Other components
EJC/TREX
127442317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
127442317
NCBI-ProteinID:
XP_051556201
LinkDB
All DBs
Position
6:complement(39313663..39350021)
Genome browser
AA seq
1841 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQRTSTPH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAETDGTDQEDHTEANDSTI
SPAPNQDAEPSLVDQHKHLTTASEGDELRKEKEMLGQPSHSAPAPPAGIASLSVRVVGER
GPTSSHVPVDSDDDSDGVDDNDDEDEEWNMNARSCHAELLKSQPVRERSGGSQQQQQPPP
QHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRMSSSSSSGSSSSDS
RSSSPEPAGDSTGRKPGPLTLLARKMESEGAFSGTVKREREGVDGQAGRGHQEASVSAVT
HTANVATVMTYPGSVISKQGIKGAFPHCQAPVSVVRTAVMEESDATKQEQEKRERQREQE
RLKALEKERKEREKALEEQKAQVQERRESEEALEREREERERALQREREEREKALEQERL
EREKALERERELERERLEREQALERERQDKERLERERQEREQALERERLEKERQEKERLE
REQALERERLEKERLEKDRLEREQALERERLEKEREQALERERLERERQEKERLEREQAL
EKERLERERQEKERLEREQALERERQEKERLERERQEKERLEREQALERERQEKERLERE
RQEKERLEREQALERERQEKERLEREEALEKERLEKERQEREKALEEERLEKERQEREKA
LEKEKQEREHALERERLEKEKEREQALERERLEKEKKEREHVLERERLEKERQEREQALE
RERLEKERQEREQALERERLEKERQEREQALEKERLEREAALERKRQEMEKAKEQERLER
EKALEKERQEREIALKRERQEKERQESDRLEKEKALEQERLQREQAQEHEREAQKKAEEE
KKRVLEKEREEKEKALIEEKQRALGEKKRLLEQQRVQEEKEKALKHDKEEEREKERESRL
PPWKRGLSHSIAHPLESPSSEKPNENKAEESQSVSKDARSTEPVPQKPPMLLSPQSSSKK
SRFLRDTPLPSSPTSVLKRPCIFSDSPTSQGPSITLASKPGKPVKDDIAQAPQKSPPTVR
QGVLVSAPQELESKTPKLAAQDQEEEKTVVSESCKVPKYNAASQDTKCQTLRRVEDQGKP
PSFPPKEKKRERDKEVEKRGRKSSSSSSDSSSSDSDSGSSSSSRSSSSSSSSQEKTCSTS
GGRRSKEIQKDNSSQRTEKVGQTVVVTGKSAISQRKKLGFTEQEEKEINNEDAIQTKEPC
LELQDGKKEKRGRKEDIEEDDTNKDTMSTEVKEAVMAEPEKVPESSEESTTPKVFSARKI
LLGSSKSSPGVVGLEGEAENAGGAGAGRKRRWGASTAVTAKKPSISITTDSLKSLIPDIK
PSLGQEAVLDLHPEEMHLSGEEGGGERGDQDLKIRRTVTQVVPSDTQENGQKESKRSEPE
DEAERSEGRDRLGQEEKMEGSIQISMETEPSSPGHDVDMKTVTPSDTLIRRSISQQKSGV
SITIDDPVRTAKQPSPPRSKLSNIIHVCNLVRPFTLGQLKELLNRTGTVVDESFWIDKIK
SHCYVTYSSAEEAMATRTALHGVKWPQSNPKFLSVDFCTQEELDFHRGLGPAGEKPVEEV
RGAAAAGPGRAVPPPLLPERDQWAEREREMERRERARAEREWDRDKVRDFSKPGEEREAG
ARRSRSRDRERRRKDRGKSKERKPDKKEKGPEEPPAKLLDDLFRKTKAAPCIYWLPLTEE
QAAQRVAARAERMREREKRRKEMEEEEDKKREEERRERMKTSGGAGGENERERDRERDRG
REREREGGKRKETYRRPVGNSASGSRRSHSRSDPPPRDRRR
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaggacgttacgctggacgggaggccgctccattcgctccgggtggcg
gatttgaaagcggcgctggaagagagagggcttccgaaaagcggccagaagaatgctctc
atcaagaggctcaagggggctctcatgttggagaaccttcagagaacctccacacctcac
attggcctgcaacctaactcccggattggggaggagatgagtcagaacagctttattaaa
cagtacctggccaaacagcaagagcttctcaggcaacgcttggagagagaagcacgagag
gctgcagaaactgatggaacagatcaggaggaccatacagaggcgaatgacagcacaatc
tctcctgcccctaaccaggatgctgaaccttccttagttgaccaacacaaacatctcact
acagcaagtgagggtgatgagcttagaaaagagaaagagatgctagggcagccatcccac
tctgcacctgccccgcctgccggaatagcatctttgtcagtgagggttgttggtgaaaga
gggccaacctcaagccatgtaccagtcgatagtgatgatgacagtgatggcgtggacgac
aatgatgacgaggatgaggagtggaacatgaatgcacggagttgccatgcagaactgcta
aaaagccaaccggtgagggaaagatctggtggctcacagcaacagcagcagccacccccc
caacacatacccttactatcacagcagctcagacagcccactcctcccccatcccctcca
cctgaactctctttccccctcccagacacccctaaacagagccctccaagtccgggtgag
cccccatctaggcagcgcatgtctagctcttccagctctggtagttcgagtagtgacagt
cgtagcagtagccctgaaccagctggtgattccacaggacgcaagccaggccctctaacc
ttactggcacgaaaaatggagtctgaaggagcattttctgggacagtcaagcgtgaaagg
gagggagtagatggacaagcagggagaggccaccaagaggcaagtgtttctgcagttacc
cacacagctaatgtagcaacagttatgacctaccctggctctgtaatctccaaacagggc
attaagggtgcttttccacactgtcaggctcctgttagtgttgtcaggacagcagtgatg
gaggagagtgatgccacgaagcaggagcaagaaaagagggaaagacaaagggagcaagag
aggctgaaagcccttgaaaaggagagaaaggaaagagagaaggctttggaagaacaaaaa
gcacaagtacaggaaagacgggaaagcgaagaagctctggagagggagagagaagagaga
gagagggctttgcagcgagaaagggaagaaagggagaaggctttggaacaagagagactg
gagagagaaaaagctttggaaagggagagagaattagagcgagaaagactggagagagaa
caagctctggaacgagaaaggcaagacaaggagagattggagagagagaggcaagaaaga
gagcaagctttggagagggagagattggagaaagagaggcaggagaaagaaagactagaa
agagagcaagctttagagagagagagactggaaaaagagaggctggagaaagacagacta
gaaagagagcaagctttagagagagagagactggaaaaagaaagagagcaagctttagag
agagaaagactggagagagagaggcaagagaaagaaaggctagaaagagagcaagcttta
gagaaagaaagactggagagagagaggcaagagaaagaaaggctagaaagagagcaagct
ttagagagggaaaggcaggagaaagaaagactggagagagagaggcaagagaaagaaagg
ctagaaagagagcaagctttagagagggaaaggcaggagaaagaaagactggagagagag
aggcaagagaaagaaaggctagaaagagagcaagctttagagagggaaaggcaggagaaa
gaaagactagaaagagaggaagctttggagaaagaaagattggaaaaagaaaggcaagaa
agagagaaagctttggaggaagaaagattggaaaaagaaaggcaagaaagagagaaagct
ttggagaaagaaaagcaagaaagagagcacgctttggagagagaaagattggagaaagaa
aaggaaagagagcaagctttggagagagaaagattagagaaagaaaagaaggaaagagag
cacgtattggagagagaaagattggagaaagaaaggcaagaaagagagcaagctttggag
agagaaagactggagaaagaaaggcaggaaagagagcaagctttggagagagaaagattg
gagaaagaaaggcaagaaagagagcaagctttagagaaggagagactggagagggaagct
gctttggagcgaaaacgacaagaaatggagaaggccaaggaacaagagaggctggaaaga
gaaaaggctttggaaaaggaaagacaagaaagagaaattgctctaaaacgtgagagacag
gagaaggagaggcaggagagcgacagacttgagaaggagaaagctttagaacaagagagg
ttgcagagagaacaagctcaagagcatgagagagaagcccaaaagaaagcagaagaggag
aagaaacgagtgttggaaaaagagagagaagagaaagagaaggctttgatagaagagaag
cagagagcccttggggagaagaaaagacttttggaacaacaaagagtgcaggaggaaaaa
gaaaaggctttgaaacatgacaaagaggaggaacgagagaaagaaagggagagccgtctt
cctccatggaagcgtggtctctcccattcaattgcccatcctctcgagagtccatcatca
gagaaacctaatgagaataaggcagaggaatcgcaaagtgtcagcaaagatgctcgatct
acagagcctgtcccacaaaagccaccaatgctattatcccctcaatcatcctccaagaag
tcccggttcctcagagatactcctctcccatcctctccaacttctgtgctgaagagacct
tgtatcttctcagacagccccacttcacaaggcccttccattacattagcatctaagcct
gggaaaccagtgaaagatgatattgctcaggcccctcaaaaatcaccaccgactgtgagg
caaggagttcttgtttcagcaccccaagagctagagagcaagactccaaagttggctgcc
caagatcaagaggaagagaagacagtggtttcagagtcttgcaaagttccaaagtataat
gcggcaagccaagacactaaatgtcagacgctcagaagagttgaggatcagggtaaacct
ccttcattcccaccaaaggagaagaaaagagaaagggataaggaggtagagaagagagga
agaaaatcatcatcctcctccagtgattcctcctcctctgactcggactctgggtcttca
tcctcctcacgatcctccagttcatcatcttcctctcaggagaaaacctgttccacttca
ggtggtaggaggtctaaagaaatccagaaggataactcgtctcagcgcactgaaaaagtt
ggccaaactgtggttgtgactggaaaatctgctatatcccagcgcaaaaaactaggcttc
acggagcaggaggaaaaagaaattaacaatgaggatgccatccaaaccaaggagccctgc
cttgaactacaggatgggaagaaagaaaagagaggaagaaaagaagatattgaggaagat
gacactaacaaagacactatgagtactgaggtgaaggaagctgtcatggccgagcctgag
aaggttccagagagcagtgaggagagcaccacgccaaaggtcttctctgcccgaaaaatc
ttgctcggcagcagcaaatcatctcccggagtggttggtttggagggtgaagcagagaat
gcaggtggtgctggtgctggcaggaagaggagatggggcgctagtacagctgtcactgcc
aagaaaccctccatcagtatcaccacagactctttgaagtctttaattccagacatcaag
cctagcttgggccaggaggcagtgctagacctgcacccagaagagatgcatctctctggg
gaagagggaggaggagagaggggtgaccaagacctgaaaatcaggcggacagtgacacag
gttgttccttctgatacgcaagagaatggacagaaagaatcaaaaagaagtgaacctgag
gatgaggcggaaagaagtgaagggcgggatcgacttggccaggaggaaaaaatggaaggc
tccattcagatttccatggagacagagccatcctccccagggcatgatgttgatatgaag
acagtgactcctagtgacacactgatccggcgttccatcagccagcagaagtctggagtg
agtatcaccattgatgaccctgtccgcacagccaagcaaccctctccacctcgcagcaag
ctgtctaacattatccatgtctgcaacctagtgagaccatttaccctggggcagttgaag
gagctactgaaccgcacagggactgtagtagatgaaagtttctggatcgacaagattaaa
tctcattgctacgtcacatactccagcgcagaggaggcgatggccacacggacagctctg
catggagttaaatggcctcagagtaaccctaagttcctcagtgttgacttctgcacacaa
gaggagttggacttccacaggggtctgggtccagcaggagaaaagccagtagaggaggtc
cgtggggcagcagccgctggacctgggcgtgcggtccccccgcctcttcttccagagcgt
gatcagtgggcagaacgtgaaagggaaatggaaaggagggagagagcacgggcagaaagg
gaatgggaccgggataaggtgagagatttcagtaaacctggagaggaacgggaggctggg
gccagacgatcacgttcccgagatcgtgagaggcgacgcaaggacagagggaagagcaaa
gagagaaagcctgacaagaaggaaaaaggacctgaagagccacctgctaaattgctggat
gacctgttccgcaaaactaaagcggcaccatgcatatactggctccccctaactgaggaa
caggctgcacagagagtagcagctcgtgccgagcgcatgagagaacgtgagaaaaggagg
aaggagatggaggaagaggaggataagaaacgtgaagaggaacgcagggagcgaatgaag
accagtggtggtgccggaggagagaatgagagggagcgagacagagaacgagacagaggt
agagagagggaacgagagggaggtaaacgaaaggagacttatcgcaggcctgttggaaac
agtgcaagtgggagcaggagatcgcacagccgcagtgaccctccacccagagaccgacga
cgctaa
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integrated database retrieval system
