Myxocyprinus asiaticus (Chinese sucker): 127442544
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Entry
127442544 CDS
T08782
Name
(RefSeq) rab effector MyRIP isoform X1
KO
K22237
Rab effector MyRIP
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127442544
Membrane trafficking [BR:
masi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127442544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
127442544
NCBI-ProteinID:
XP_051556614
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All DBs
Position
6:complement(33199365..33246652)
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AA seq
1230 aa
AA seq
DB search
MGRKLDLSGLTDDEAEHVLQVVQRDMQLRKTEEARLSEMKQTLVEEGSRCDLLSRQHRFN
ERCCIRCCSPFTFLLNPKRFCLDCCYNVCKHCSTYSKKDKGWLCSACQKSRLLKTQSLEW
FYNNVRRRFKRFGSAKVLKNLYRRHASERGVLAELTEGSTYEESICNEGSVCESDSTFYR
QSEEHSMAETISVALRVAEEAIDEAIAKAESQADSQERQNEAHYLRENRGELIEELATTI
VQKIVRRRKDLSEMQSGCNLDLSPGQNTEMTSAVQTQSTFNASLWRSQSAFCLDERVDQH
ASIGSRPSASIGHSLEMKKGGEVPVQALPSWRSVDQLDNSMLQSPDGNWIAYQNTLQPRP
SLQTKRKSLGYSILEKESGVVSAYDEMGSETEADGDGVWGAALLELRRKMSANKQSIFPE
SYSRQSTLPLDGQTQQLIADIFNTDTDNSPVQSGQDGPLPKSHKALLPFLKRKVAPEHRR
PSYIRRPSIMDINFNPGTESSEDGLVDSRVKRSRRRRKNKREEAEWKGQSVLSTSLPDCS
SQLSNSLVKRRYVKQDSALREKSLSDHALEVDTSDTATPDILSSGAVTPDPFGADLKAPS
NANHGALGVVGSLDQELTYKLRELTSQVRETQFSSTEDELDRLEYPEDSTKAEEVDKVMG
HALFCIEVDAKERSDEIEATNQQRRTESLKENELAYKLRELTSQVCETQLSSTEDELDRL
EYETEAANQPLKTDIMEVNEGWTDRDKIIQVEEKIKYHVEMMVENAEEERSEKRQKGSVS
EQENSEQNYTNGKTQMSEEMSTGSQTQRLAETDPQNERVIERVEKRKREVQTEEEKAKMK
DFGFSVEAEQSRADNIETVNLSSEFRFISEDEKVEFDRITDTVVKALDNMEEKIEAFTIE
GVFLTREENEGEKLERLEAEEERVIKKDGVKQEMEDSIELELTFVGGGLNQVKEKEINEG
KINKAVALERHKEDTEGREDKECKTIFKVSEERVLEKDVNSQCDLAKKREEQRDKDPTTL
NSLQHSTPSGQEEYLSPEEIYKDAHKLDLSENLHLISNILQQRYSAASLRSITTEVLKVL
NATEDLIHGSMGDGRSEPNHSDLSTIPPVEARRLDEQLSRLEENVYVAAGTVYGLEAELG
DLEECARSISGSTSERELAHLEDQVASAAAQVQQSELQVSDIASRIAALKNAGLNVAPQT
QFTKTQTIGSSRKLRRRLPAPPTQDPGSSD
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaaactggatctctctggtctgacggatgacgaggcggagcatgtacttcag
gtagtgcaacgggacatgcagctgcgaaagacagaggaggcacggctcagtgagatgaag
cagacactggttgaggagggcagtcgatgtgatctgctgtcacggcagcacaggtttaat
gagcgctgctgcatccgttgctgttctccattcaccttcctgctcaaccccaaacgcttc
tgtctggactgttgctacaacgtctgcaaacactgctctacctacagtaagaaggacaaa
ggctggctgtgctccgcctgccagaagagcaggctgctgaaaacccagtcactggaatgg
ttctacaataatgtgagaaggcgctttaaaaggtttggcagtgccaaagtgttaaagaac
ctctacaggaggcatgcatcagagcgtggagtgctagcagagcttacagagggcagcaca
tatgaggagagcatctgcaatgaaggcagtgtatgtgagagcgactctacattctacagg
caaagtgaagagcacagcatggctgaaactatcagtgtggcactgcgggtggcagaagag
gccatagatgaggccattgctaaggctgagagccaggctgacagtcaagaaaggcagaat
gaagctcattatctgcgagagaacagaggagagctgattgaggaactggccacaactata
gtacagaaaattgtccggcggaggaaggatctgtctgagatgcagtctgggtgtaatctg
gacttgtcccctggccagaacactgaaatgacctctgctgttcaaactcagagtaccttc
aatgcttcactttggcgatcacaatcagctttttgtcttgatgagagagtggaccagcat
gccagcattggctcaaggccctcagcatctattggtcattctctggaaatgaagaaagga
ggagaagtgcctgtccaggccttgcctagctggaggagtgttgaccaactggacaattct
atgttgcagagccctgacggaaactggattgcttatcagaacaccctgcagcctcggcca
agtcttcaaaccaagcgtaagagcctgggttacagcatcttagaaaaggagtctggtgtt
gtgtctgcttatgatgagatgggctctgaaaccgaggctgatggtgatggggtctggggt
gctgctctgctagaacttcgtcgtaaaatgtctgccaacaagcagtcgattttccctgaa
tcttatagccgtcaatcaaccttgcctttggatggccaaacccaacagctcattgcagac
atctttaacactgatactgataactcccctgtccaatctggccaggacggaccactgccc
aagtcccacaaagctctgctgcccttcctgaagagaaaagtggctccagaacacagacgc
ccatcatacatacgccgcccaagcatcatggatattaatttcaacccagggacggagagc
agtgaggatggcctagtggacagtagggtcaagaggtcacgccgaagaaggaaaaataag
agagaggaggcagagtggaaagggcagtcggtattgtctacatctttaccagattgtagt
agccagctctcaaactctctggtgaagagacggtatgtgaaacaagactcagccttgcgt
gaaaaaagtcttagtgatcatgctctggaagttgacacttcggacactgcaacccctgac
atcttgagctctggagcagtgacccctgacccattcggagctgatctcaaagctcccagc
aatgcgaatcatggggcccttggtgtggttggctctttagatcaggagttgacttataaa
ctgagagagctaaccagtcaagtcagagaaacacaattttcctccactgaggatgagttg
gacaggttggagtatccagaagattcaacaaaagcagaagaggtagataaggttatggga
catgctttattctgtattgaggttgatgcaaaagaaagatcagatgaaattgaagccaca
aatcaacaaaggagaacagagagtctgaaggaaaatgagctagcttacaaactcagagag
ctaaccagtcaagtctgcgagacacaactttcctccactgaagatgaattggacaggtta
gagtatgaaacagaagctgcaaatcaaccattgaaaactgatattatggaggtcaatgaa
ggatggacagatagagacaaaataatacaagttgaagagaaaatcaaatatcatgtagag
atgatggttgaaaatgcagaagaagagagatcagagaaaaggcaaaagggcagtgtgtca
gagcaggaaaacagtgagcaaaattatactaatggcaagacacaaatgtcagaagaaatg
agcactgggagccaaacacaaagacttgctgagacagatccacaaaatgagagagtcata
gagagggttgaaaagagaaagagagaagtccagactgaagaagaaaaggcaaaaatgaaa
gattttggattctcagttgaagctgagcagagcagagctgacaatatagagacagtcaat
ttatccagtgaatttagatttattagtgaagatgaaaaggtggaatttgataggatcact
gatactgtagtgaaggctttggataacatggaagagaagatagaagcttttactattgag
ggggtatttttaaccagagaagagaatgagggagagaaactagagagattagaggcagag
gaggaaagagtaatcaagaaagacggtgtaaaacaggagatggaagacagcatagaattg
gagctgacttttgttggtggtggattgaatcaagttaaggaaaaagaaattaatgagggc
aagatcaacaaagctgttgccctagaaagacacaaagaagatacagaggggagagaagac
aaggaatgtaagactattttcaaagtatccgaagagagagttctggaaaaggatgtcaac
agtcaatgtgacttggccaagaaaagagaggagcagagagacaaggatcccacaaccctg
aactctcttcagcatagcaccccatctggtcaggaggagtatctgtcaccagaggagatc
tacaaggatgcacacaaactggacttgagtgaaaacctacatttgatctccaatatacta
cagcagaggtactcggctgcatcactgcgcagcatcaccacggaggtgctgaaagtactg
aacgccacagaggatctgattcacggatcaatgggagacgggagaagcgagccaaaccac
agtgacctctcaaccattcccccagtcgaggccaggagactggacgaacagctcagcaga
ctggaggagaatgtgtatgtggcagcaggtacagtgtacgggcttgaggcagaactggga
gatcttgaggagtgtgcgcgcagcatcagtggatccacttctgaaagagagctcgctcac
ctggaggaccaggtggcctctgcagcagcccaggtgcagcagtctgagcttcaggtttca
gatattgcatccagaattgctgctctgaaaaatgcaggccttaatgtagctccacagacc
cagtttaccaagacacaaaccattggctcctctcggaaactgaggaggcgactgccagca
cccccaacacaagatcctggttcttctgactga
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integrated database retrieval system
