Myxocyprinus asiaticus (Chinese sucker): 127442707
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Entry
127442707 CDS
T08782
Name
(RefSeq) RNA-binding protein FXR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127442707
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127442707
Factors involved in mRNA localization
Other mRNA localization factors
127442707
mRNA cycle factors
Stress granule specific factors
127442707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_KhpA-B
KH_NusA_2nd
DUF1604
DUF150_C
Motif
Other DBs
NCBI-GeneID:
127442707
NCBI-ProteinID:
XP_051556862
LinkDB
All DBs
Position
1:20417132..20447201
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AA seq
675 aa
AA seq
DB search
MDGMAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPPDYHKDIC
EGDEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
YSQNSFYKVPIAVPEDLRDICLTENIHKDFRQAIGANFIFYNTSTHQLIVLSTNESTVKR
AALLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVHEDLMGLAIGSHGAN
IQQARKVPGITAIELEEESCTFRIYGETPEAVKQARTYLEFKEDSFQVPRSLVGKVIGKN
GKIIQEIVDKSGVVRVRIQGDNDKKLPREEVGRQGAGRDNTVSSQEGMVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRSGSGVAGERDKGYLTD
ESSNSLQTTRTYGGRGRGRKTNNTYSGYGTNSEMSNASETEEIVDRELRPRGIGGEDRGS
KRGGRGGGSSAGRGRGGPVPRNTYTISSVLQDPDCNPFSLLEGEGELGGETDASESMGGN
NRRRRSRRRRNDQEPSLMDAAANESDSQAAASDNGLEEEGRPQRRNRSRRRRNRGNRPEG
GSASPDRQPVSVADFISRAESQSRQNLPGKEEIQPASHPKENGTSVSKDERTPKCSPSNG
VASPGEALTLVNGVL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatggcggtggaggtgcgcggctcaaacggggccttctacaagggtttcatc
aaagatgtacatgaagactccctcacaatagtctttgaaaacaactggcaaccggagaga
cagctgccgttcagtgacgtgaggttgccgcccccacccgattaccacaaggacatttgt
gagggagatgaggtggaggtttactcaagagccaatgagcaggagccatgcggctggtgg
ctggcaagggtgcggatgatgaagggagagttctatgtgatcgagtatgcagcctgtgat
gccacatacaatgaaattgtcacatcagaacgaatccggccagtcaatcccaacagccct
tactctcaaaattcattctacaaagtccccattgctgtaccggaggacctcagagacatc
tgtttgaccgagaacatccacaaagacttcaggcaagcaatcggagccaactttatcttc
tacaacacttccacacaccaactaattgtcctgtccacaaacgagtccacggtgaaacga
gcagcgctgctgagtgacatgcacttccggagtattcgcaccaaactcatgctgatgtcc
cgcaatgaggaggccaccaaacacttagagacaagtaagcagctggcgtctgcatatcag
gaggaagtgagggtgcatgaagatctaatgggtctggccatcggttctcatggcgccaac
atccagcaggcccgcaaagttccaggcatcacagccattgagctggaggaagagagctgc
accttcaggatctatggagagactccagaggcagtaaagcaggccaggacatatctggag
tttaaagaggattctttccaggtgccaaggagccttgtaggcaaagttattggcaaaaat
ggtaaaatcattcaagagattgtagacaaatcgggagtggttcgtgtccggatccaaggg
gacaatgacaaaaagctgcccagggaggaggtaggcaggcagggggctggcagagacaac
actgtcagcagccaagagggaatggttccctttatctttgttggaactaaagagaacatc
agtaatgcccaggccttgctggaataccatgtggcctatctacaggaggttgagcagttg
cgtcttgagcgtctacagattgatgagcagctccggcagatcggggtgggatatcgtgct
cccccaagtcgctctggttcaggggttgccggtgagcgtgacaaaggctacctcacggac
gagagctcaaactccttgcagaccacacgtacctatggaggaagaggccgtggacgcaaa
acaaacaatacatactctggctatggaacaaactctgaaatgtccaatgcatcagagaca
gaagaaatagtggaccgtgagctcaggcccagaggaattggaggagaagacaggggctct
aagcgtggcggtcgtggcggtggctctagtgctggcaggggccgtggtggcccggtaccc
cgaaacacttacactatcagctcagtactccaagatccagactgtaacccgttctctctg
ctggagggtgaaggtgaacttggcggagaaacagacgccagcgagagcatgggcggaaat
aaccgcaggagacgatcccgtcgtcgccgcaatgaccaggaacccagcctgatggatgca
gctgctaacgaatcagacagtcaggcagcagccagtgataacggattggaagaggagggc
aggccgcagcgtcgcaatagaagccgccgccgccgtaaccgtggcaaccgccctgaggga
ggctctgccagccctgacaggcagccagtttctgttgctgactttatctctcgtgccgaa
tcccagagcagacagaacctcccagggaaggaggagatccaacccgcatcccatccaaag
gaaaatgggactagtgtaagcaaggatgaacgtactcccaagtgttcccccagcaatggt
gttgcatcccctggggaggctttaaccctggtgaatggggtgctgtaa
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