Myxocyprinus asiaticus (Chinese sucker): 127442716
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Entry
127442716 CDS
T08782
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
masi04040
]
127442716
Ion channels [BR:
masi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127442716
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
127442716
NCBI-ProteinID:
XP_051556866
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Position
6:complement(31754364..31768759)
Genome browser
AA seq
1105 aa
AA seq
DB search
MACMTKCQSKSRQQSYDSGIDGDESKQVSTNVFEWAMQGNTVALEKHFRHLDIRDHIGAS
PLHYASSKGHVCTIRLIVQLSGQQELNVRDEDGNTPLHWAVQWDQPQSCSMLLTLGADPN
ILNNSHQSPLHLAVSLSNNVLVELLVSHKQTDVNLEGDLGNTAIISAASLDNYDALDILF
KHGAKLCRQNKLGHFAIHAAAFFGAKKSMEVILQRGEEFGLSIKTHINYVDKSCSSPLHL
AVRGGNLEVIKLCIAYGAKIDQKQCDRSNALHFACSQGATEAVKVMMSAYHKVSDLINIT
DGANQTPLHKAAIFDHFELSEYLISQGANIDFVDCKGHSPLLLATSCGAWRTVNLLLSHG
ADLKKKDKCGCNFLHLAILQPRGLKNLPTEVLQHQSVRELLNDEDIEGCTPLHYACRLGI
PESVKNMLGLEVSLNQKSKQKKSALHFAAEYGRINTCHKLLEMITDTRLLNEGDENGMTP
LHLASRGGHVKVVELLLRKGALFHSDYKGWSCLHHAASEGYTQTMDTLLTSNIKFLDKMD
GDGNTALHLAARAGHVAAVRLLLYRGAKFILNKSDASFLHEAVHNGRKEVASAVIESDRC
EEAMTTYKPNSAKRCIVMDMIEFLPESFKHLLDTCITESDEDVNSCNYCIEYNFRWLQHP
LQNLKKATTERDSSYKPLSALNAMVHFNRMSLLTHPVCKKYLEMKWNAYGIKAHLLNMMV
YALGVFPLTFLIVNLKPTLNNERNVTSVQMVCTSLHKQSYFITTCIFLVLAMNMYAVGKE
ILQIVQQRMNYLRDLSNYMDWAAAICALLFVVPLLLNLKSTWHWQAGALAALASWMNLLL
YLQRFERIGIYVVMFREISRTLLSIIVLFFYLILAFALSFYALMIEQRHFGRMFLSLMQT
FVMMVGEINYQDNFLKPFLQGNLPFPFLTMAMFVWFVLLVPILLMNLLIGLAVGDIAEVQ
TNACLKRIAMQIDLHTNLEERLPYWFMKRVDQVSIKEYPNRCFRGKKWWFFIGNDVRRVR
TRLSPTTHQSTPLERELTKQKYRLKEMSEAMEKQHNLLKLIVQKMEISSEAEDHDGPPIF
QELKEKLLTRSKWGPLLRAVTTRKK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcatgaccaagtgtcagtcaaaatccagacaacagtcctatgacagcgggata
gatggagatgagagcaaacaagtatccacaaatgtttttgagtgggcaatgcaaggaaat
acagttgctctggagaaacacttcaggcatctggacatacgcgaccacatcggtgccagc
ccactgcactatgcctcatccaaaggacatgtttgcaccatcagacttatcgtgcagctc
agtggacaacaagagctcaatgtcagggatgaagatgggaatactcctcttcattgggct
gtacagtgggaccagccacagagctgctctatgttgctgaccctaggagcagatcctaac
atcctcaacaatagtcaccaatcaccactgcatcttgcagtaagcctgagcaataatgtc
ttggtagagctacttgtctcacataaacaaactgatgtgaacctggaaggggacttgggg
aacaccgctattatttcagctgcttctttggataactatgatgctctggacatattgttt
aagcatggtgcaaaactctgtcgtcagaacaagcttggacattttgccattcatgctgct
gctttttttggagctaagaaatccatggaggtaattcttcagagaggggaagaatttggt
ctgtccattaagacccatataaactatgtagataagtcttgcagtagtccacttcacctg
gctgtacgtggaggaaaccttgaagtcattaagctctgcattgcatatggagcaaaaatt
gatcagaaacagtgcgatcggtctaatgctctccattttgcatgtagtcaaggtgccact
gaagctgttaaagtaatgatgtcagcttaccataaagtctctgaccttatcaacatcact
gatggggccaaccagacacctctacacaaagctgcgatatttgatcattttgaactctcc
gagtaccttatatcacagggtgctaacattgactttgttgactgcaaaggccattctcca
ctccttctggcaacaagttgtggagcatggagaaccgtcaatctactcctgtctcatggg
gctgatctgaagaaaaaagataaatgtggatgcaacttcttgcatctggccatcttgcag
cccaggggtctaaaaaacctacccacagaggtactgcagcaccagagtgtgagagagctc
ctcaatgatgaggacattgagggctgtactccccttcattatgcctgtagactgggaata
ccagagtctgtgaagaacatgctgggattagaggtctcgctcaaccagaagtccaaacag
aagaaatctgctctgcattttgcagctgaatatgggaggatcaatacctgccacaagctt
ttggagatgataacagacaccagactgttgaatgagggggatgagaatggaatgaccccg
ctgcacctggcttctcgtggcggtcatgttaaagtagttgagcttctactccgcaaaggg
gctttgtttcacagtgactacaaaggatggtcttgtctgcatcatgctgcatctgaagga
tacacacagactatggatactttgctgacatctaatatcaaatttctggacaaaatggat
ggagatgggaacacagctttgcatctagctgccagggcggggcatgtggcagcagttaga
ctgctgttatacagaggggccaagttcattctcaacaagagcgatgcctcattcttgcat
gaggctgtgcataatgggaggaaagaggtcgccagtgctgtgatcgagagtgataggtgt
gaagaggcaatgacaacatataaaccaaattcagcaaaacgctgcattgtaatggacatg
atagagttccttccagagtcctttaaacatcttctggacacttgtataacggagtcagat
gaagatgtaaacagctgcaattactgtatcgagtacaatttcagatggcttcagcatcca
ctgcaaaaccttaaaaaagcaaccacagaaagagacagtagctacaaacctctcagtgca
ctaaatgctatggtacattttaatcgtatgagcttgctgacccatccagtctgcaagaaa
tatttggagatgaaatggaatgcctatggcatcaaggcacatttgcttaatatgatggtg
tatgcactgggggtgtttcccttaactttccttattgtgaatctgaagcccacactgaac
aatgaaagaaatgtgacatcagtccaaatggtctgcacatccctgcacaagcaatcgtat
tttatcacaacatgcatattcctggttcttgctatgaatatgtatgcagttggcaaagaa
attctgcaaatagttcaacagaggatgaattatttgcgagatttgtctaactacatggac
tgggctgctgccatctgtgctctactgtttgtggtgccactgctgctgaatctgaaaagt
acctggcactggcaggctggagcactggcagctctggcctcatggatgaatctccttctc
tatctccagcggtttgaacggattggtatttacgtggtcatgtttcgagagatctcacgg
acactgctgagcatcattgtgttgttcttctacttgatattggcatttgctttgtccttc
tatgccttgatgatcgaacagcgacattttggaaggatgttcctttcactgatgcagacc
tttgtcatgatggtaggagaaatcaactaccaagacaatttcctgaaaccctttctgcaa
ggaaaccttccgttccctttcttgacaatggcaatgtttgtttggtttgtcttacttgta
cctattcttctcatgaacctactgattggtttggctgttggtgacatagcagaggtccag
acaaatgcatgcttaaagcgtattgcaatgcagattgatcttcacacaaatctggaagag
agacttccctactggtttatgaagagggtggaccaggtctccattaaagaatacccaaac
agatgcttcagaggaaagaaatggtggtttttcattgggaatgatgtgcgaagggtcagg
acccgtctcagccccaccacccaccagtcaactccactggaacgggagctaaccaaacag
aaatacaggctgaaggagatgtcagaggctatggaaaagcaacacaacctgctgaagctc
atagtgcagaagatggagatcagctcggaggctgaagaccatgacggccccccaatcttt
caggagctgaaggagaaacttctcaccaggagcaaatggggtccactgctcagggcagtt
accaccagaaagaaatga
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