Myxocyprinus asiaticus (Chinese sucker): 127443354
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Entry
127443354 CDS
T08782
Name
(RefSeq) LIM and calponin homology domains-containing protein 1a isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
masi04990
]
127443354
Domain-containing proteins not elsewhere classified [BR:
masi04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
127443354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
127443354
NCBI-ProteinID:
XP_051557814
LinkDB
All DBs
Position
7:complement(36815529..36895220)
Genome browser
AA seq
1846 aa
AA seq
DB search
MASPGDDSASNAQLEQPESVEPTPEPAFQEAQKWIEAVTGRSFCDKDFRSGLENGVLLCK
LLSSIKPGLVKKINRLPTPIAGLDNLTLFLRGCEELGLKGSQLFDPGDLQDTSIRANLTG
SDCSRKLKNVLITIYWLGKAANSCATYNGPTLNLKEFEGLLSMMRKECVSEDLDSPKRSI
RDSGYIDSWESERSDSLSPPRHGRDDSFDSLDSFGTRSRNTPSPDTVLRCNSDDSEGDGS
HRKLPDVRKDDMSARRVSFKEPRAALPFNQYLPNKSNQTNYLPAPLRKRRSEREEDRRSV
SNSTSPVGERPLREESLEVLKEGAVMSQSHVLQKTINWEGEKGVELEEADLNKMRKLKKA
GIKVLPASVRYNSPNVIAEESNKAKPPSPDIILRRDNDFLRAAAPHEWDSNEEDEDEEGE
RKVPDVQKDDLASRRARINQFKPSVTHYFLPGSCSWKDREKWEGIRLASQHAVLERLEKM
EQEKRSLADSTSSEVSIITRKDNPFLNPEKEREKEGDEEDERELERRIVIPNPHKDDLAR
RRAGRGPCPPKDPHQSLVQTSITQSDLEKWQRLKMNTESSEAGSILAEVSIITRKDNPFL
CPEKDSGSEEEKEKGPVREDGGRVVMPNVMKDDLARRRSQSGPTPQRDPRQSLLQTTITQ
SDLEKWQRLKMNTESSDEPIVPLCQTCLEKGCLSIASNAKVAKNDLAGCRERSSGERRRI
VTFGGVTEMENTSWQEEDEERGEGNEAEKLRYLLSMAPVAVPTIGLGSRLTKRAVGSDAN
PEPAVVMPSEPPNPVMFDLKQSVTSTEEELAEKSKDEREYDEDEEREPDVEKDDMLARRT
GAFQKAAKGTTYNRFLPQPGSNREGTIGASLSQKGSIQIDMSGECDLQYLERNIKTKRTK
IGQRNEPAEQLPKTPVPVSVVAQKIPDIVHTTATNVDCCGSYDDYEECGDEGPLPDIDKD
DMLTRRTEAHQKPNGGTGQPFNAFLPKLGAVKHKNTPASGFQQSYLNPKEQEKVPALDSF
TLSSVAPPPRDAEDTPRKCPQLMDRQETGSVGVVGQESLIKNETITKSSSPKPDRASRRP
HWQEDDDLPPIFRATSVSDETESTSLIDMRDEEELAYLRQHSQSRHERLHNQYNKHKEEE
DQWQDDLARWKNRRRSASQDLIRKEKERKMMEKLMTTDGGSGHRKKSIKTYKEIVEEKER
REQELHEQYSKASTPEEKAAVLQRYALRFTISDAILEKLQLPKLPSAATPIHTSPLHQHV
KQSTCPAPVEPEAPEAPEPTQTTQTQHSVLADQQIVQNQTPGQPKSPEPSPTKTTKTPEI
PSAPIRPLVCSKPVPLITPKPYSQPRLSQGPHKTLKTDGLVRVNGESTQEERRDRAAGVS
LIHPVSFSSSPPKSATQTQQIEDLAVLETSHHQQNTQTSLPDQEKKVIMKEKECSLSIHK
ENSKEETSTTLQSEPAEKQSMPDMMVKRSCVVTTTIVTELTQTHPVQQNDTSIADQICGS
VQNSFDLSTSIESSKADQTSYSLSMTEGTDYSIECIETPMLNLAKRVDHWTWDPNEERRR
QERWQQEQERLLQEKYQREQEKLKEEWERAQKEVEEEERRYHEEEKRILEETVTPLTPHS
SVLPSRSVTEAPSLSQPPHDTIVLSLADWERKQEMLERQAQTNQSNGLTHSPDEVITPAQ
QNGQRTEPQESQTATPQLQFIQDGSWNCKSKGRQEDLKKTASLDRKQSPPQSQTTGMRRT
GSCENVLGTQSSKSPSPSQDTLPPSPSRSVSGKKLCSSCAHPLGKGAAMIIETLGLYFHI
QCFKCGICKGLLGDTSAGTDVRIRNGLLNCQECYIKSRAAGQPTTL
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctggagacgattcggcttcaaatgcccagctggaacagcccgaatctgtg
gaaccaacccctgaaccagcgtttcaagaagcacagaaatggatcgaggcagtgacagga
agaagtttctgtgacaaggatttcagaagtggactggagaacggcgttctgctctgcaag
ttgctgagttcaatcaaaccaggccttgtgaaaaagatcaacagacttccaacacccatt
gcgggactagataatctgaccttgtttctgagaggatgtgaagagctgggactgaaggga
tcacagctattcgatcctggagacttgcaagatacgtcaatacgagcaaacttaacgggc
tctgactgcagtagaaagttgaagaatgtgctcattactatatactggcttggtaaagct
gctaacagttgtgcaacgtataacggccctacactcaacctgaaagagtttgaaggactc
ctttccatgatgcgaaaggagtgtgtaagtgaagatttggactcccctaagcgcagtata
agggacagtggttacatagacagctgggaatcggaacgctctgattcgctgtctcctccg
aggcatggtcgtgatgattcgttcgacagcctcgactcatttggcacgcgatcacggaac
acaccctccccagacaccgttcttcgctgcaacagtgatgactctgaaggtgacggcagt
cacaggaagttgccagacgtgcgtaaggatgacatgtccgcccggcgcgtgtccttcaaa
gagcctcgcgctgctctccccttcaaccagtatctgcccaacaagagcaaccagaccaac
taccttcctgcccccctgaggaagaggaggagtgaaagagaggaagacaggaggagtgtg
agcaactcaacatctcctgttggagaaagacctctgagagaggagagtctagaagtatta
aaagagggtgctgtcatgtctcaaagccatgtgctacagaaaacaatcaactgggaaggt
gagaaaggggtggagcttgaggaggcagatctcaataaaatgaggaagctgaaaaaggcg
ggtattaaagtattacccgcctctgtgcgatacaacagtccaaatgtcattgctgaggag
tctaataaagctaaaccaccttcccctgacatcattcttcggcgtgacaatgacttcctg
cgtgctgccgccccacatgagtgggactcaaacgaggaagatgaggatgaagagggagag
aggaaggttccagatgtccaaaaggatgatcttgcttctcgcagagcacgcattaatcaa
ttcaaacccagtgtgacgcattacttcttgccaggctcttgtagctggaaggaccgagag
aaatgggagggaatcaggctggcatcccagcatgcagtattggagaggttggagaagatg
gaacaggagaaaaggagtctggctgactccacctcctctgaggtgtcaatcataactcga
aaggacaatcctttcctgaaccctgaaaaagaaagggaaaaagagggggatgaggaagat
gagagagagctagagaggaggatagttatcccaaacccacacaaagatgatctagcaagg
aggcgagctgggcgagggccatgccctcccaaagatcctcatcaatcattggtccagact
tccatcactcagtctgacctggagaagtggcagagactcaagatgaatacagagagcagt
gaggctggctccatccttgctgaagtgtcaatcataactcgcaaagacaaccctttcctg
tgccctgagaaagacagtggaagtgaggaggagaaggagaaagggccagtcagagaggat
ggggggagggtggtgatgcctaatgtaatgaaagatgacctggccagaaggcggagccaa
agtgggcccaccccacaaagagatcctcggcagtcattgcttcaaacaacaatcactcag
tcagacctggagaagtggcagagactcaagatgaatacagagagcagcgatgagcccatt
gtccctctgtgtcagacgtgtcttgagaaaggctgcctctctatcgcctccaatgcgaag
gttgccaagaacgacctggctggttgccgggaacgttcctccggtgaacggcggcgtatt
gtgacatttgggggtgtgacagagatggagaatacatcctggcaagaggaggatgaggaa
aggggagaggggaatgaggcagagaagcttcgatacctcctctcgatggcacctgttgcc
gtgcccactatagggctgggctccagactaacaaagagagcagtgggcagtgatgcaaac
ccagaacctgctgtagtcatgccctccgaacccccaaaccctgtcatgtttgaccttaaa
cagtctgtgacctctacggaggaggagctggctgagaaatcaaaggatgagagagaatat
gatgaagatgaggaaagggaaccggatgtcgaaaaagatgacatgctggctcgtaggaca
ggagcatttcagaaggcagcaaaagggacgacctataaccgattcctcccgcagccagga
tccaatagagagggcactataggggcttccctatcccagaaaggaagtattcagatcgac
atgagtggagaatgtgacctgcaatacctggaaagaaatataaagacaaagagaaccaag
attggacagagaaatgaaccagctgaacaacttccaaagacaccagttccagtttctgta
gttgcccaaaagatccctgacattgtacacacaactgctaccaatgttgattgctgtggc
agttatgatgattatgaagagtgtggggatgaaggcccactgccagacattgacaaggat
gacatgctcactcgaagaactgaagctcaccaaaagccaaatggggggacaggacagcct
tttaatgcatttttgcccaaacttggtgctgtcaaacacaaaaacacccctgccagtgga
ttccagcagtcatacctcaaccctaaagagcaagagaaagttccggctttggacagcttc
acccttagctctgtggccccgcccccaagagatgctgaggacacgcctaggaagtgccct
cagttgatggacaggcaagagacgggctctgtgggtgtggtgggacaggaaagtcttatt
aaaaatgagactattaccaaaagctcctcccccaaacctgaccgagcctcacgtcggccc
cattggcaggaagatgatgatctccccccaatattcagagctactagtgtttctgatgaa
acagagagtacgagtttgattgacatgcgtgatgaagaagagctggcctacctccgacag
cacagccaatcacgacatgagcgcctacacaaccagtacaacaaacacaaagaggaggag
gaccagtggcaagatgatttggctcgctggaagaatcggaggcgaagtgcctctcaggat
ctgatcagaaaagagaaagagaggaaaatgatggagaagttgatgacaacagatggagga
tctggccatcgcaagaagagcatcaaaacatacaaagagattgtagaggagaaagagcgt
agagaacaggagctacatgaacagtactccaaggcctccaccccagaagagaaagcagca
gtgcttcaacgctacgctctccgattcaccatcagcgatgccatactggagaaactccag
ctccccaaactgccttctgctgccacgccaatccacacttctcctctccaccagcatgtg
aagcagagcacatgccctgccccagtagaaccagaagctccagaagctccagagcctaca
caaaccacccaaacacagcacagtgtccttgctgaccagcagattgtacaaaatcagaca
ccgggacagcccaagagccctgaaccatcacctacaaagaccaccaaaactccagaaatt
ccatcagcacccatacgtccccttgtctgctcaaagcctgttcctctaatcaccccaaaa
ccctacagccagcccagactcagccagggcccccacaaaacactgaagactgatgggctg
gtgcgtgtgaatggggagagcactcaagaggagagaagagaccgtgcagctggagtgtct
ctaatacatcctgtctccttctcttcctcgcctccaaagtcagccactcagactcaacaa
attgaggatctagctgtgttagaaacctcacaccaccagcaaaacacacagacatctctt
cctgaccaggagaaaaaggtcataatgaaggaaaaagaatgttctctaagcattcacaaa
gagaatagcaaagaagagacctcaactacactacagtcagaaccagcagaaaaacagtca
atgcctgatatgatggtgaagcgcagctgtgttgtcacaacaactattgtgacagaactc
acacagacacaccccgtccaacaaaatgacacctctattgcagaccagatttgtggttca
gtccagaattcatttgatctgagcacatctatcgagtccagcaaggctgaccagacttca
tactcactctcaatgacagaggggactgactattccattgaatgtattgaaaccccaatg
ttgaaccttgcgaaaagggttgaccattggacatgggatcctaatgaagaacgcaggcgg
caggagagatggcaacaagagcaggaacgcctgctgcaggagaaataccagagagagcaa
gagaagctgaaggaggagtgggagagagcacagaaagaagtggaagaggaggagaggaga
taccatgaagaggagaaaaggattctggaggaaaccgtgaccccactgacccctcactcc
tcagttttaccctccagaagtgtgactgaggccccctccctcagccagccaccacatgac
accattgtcctttcattggccgactgggaaaggaaacaggaaatgctggagagacaagca
cagacgaaccagagtaacggactgacacacagccctgatgaagtaatcacaccagctcag
caaaacggccagagaactgaaccacaggagagccaaacagctacaccacaactgcagttt
atacaagatggatcatggaactgtaagtctaaaggcagacaagaggatctgaagaaaact
gcctcactggaccgtaaacagagtccaccccagagccagaccacagggatgaggaggact
gggtcgtgtgaaaatgttttaggaacacaatcatccaaatcaccttcaccatcacaagac
acgctgcctccatcccccagcaggtcggtaagtggaaaaaagctctgctctagttgtgcg
catcctttgggcaaaggagcagctatgatcattgaaaccttggggctgtactttcatatt
cagtgttttaagtgtggcatatgtaaagggttacttggcgacacaagtgccggaactgat
gtcagaattcgaaatggacttcttaattgtcaagaatgctacataaagtcacgggctgct
ggccagccaacaacattgtga
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integrated database retrieval system
