Myxocyprinus asiaticus (Chinese sucker): 127443630
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Entry
127443630 CDS
T08782
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03030
DNA replication
masi03410
Base excision repair
masi03420
Nucleotide excision repair
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127443630
03410 Base excision repair
127443630
03420 Nucleotide excision repair
127443630
03430 Mismatch repair
127443630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masi03032
]
127443630
03400 DNA repair and recombination proteins [BR:
masi03400
]
127443630
DNA replication proteins [BR:
masi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127443630
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127443630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_7
AAA_30
Rad17
AAA_33
AAA_17
RuvB_N
AAA_16
AAA_14
nSTAND3
BRCT_2
AAA_18
AAA_19
RNA_helicase
NTPase_1
AAA_28
Motif
Other DBs
NCBI-GeneID:
127443630
NCBI-ProteinID:
XP_051558303
LinkDB
All DBs
Position
7:32663515..32685456
Genome browser
AA seq
1125 aa
AA seq
DB search
MDIRRFFAPTKPSNRSTSTDEEPKRRRKPKTKVTSPKSDEKPTGKRKKRVIIDSDSEEEK
KERKTKKSTKETATPTEKKHPVTYVSDSDSDDTFVTLKKSSKSRENGTVKGKKESDLKKT
KEVKTSSSKSPTTAVKVRGKSSQSITSPKTAPTLPKQTPTSVMDFFGSSSVQRSEKKMVA
SMSIKRKAESEESLSDEAIARELQMDDDMEMEKQIHDDEEFARTLAMLDEVPLAKKARVD
SVSPSKDSSQTKTSETKAKLKDTSPKTSPIKTSSKLAQMKRQQEQVEVEKGEKQIKISPK
KEPISPKISERAATPKTGSSTGKTKSSFSTPKSDCAPIKTSPTKPENTSPEDLEKKRANT
SAYRNYLNREGPRALGSKEIPQGADNCLEGCVFVLTGVLESLERDDAKSLIERYGGKVTG
NVSRKTTYLILGRDSGISKTEKAESFGTKIINEDQLLDLIRTKPGKKSKYEIAAEAENKS
AKTRTPDSRGKPTPTTKKASPQGPSPNKRSPLVGKSKPGSASTSGSSGASRSNSEVKKSL
SFDKTKTISTPEKDGSSLLWVDKYRPRNLKNLIGQQGDQSCANKLLRWLQNWHKNNSGNA
KAPAAKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNS
LKEVIAESLNNTSIKNFYTGASQTVSSKHILIMDEVDGMAGNEDRGGIQEMIGLIKQSKI
PIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEVILA
SNQDIRQVLHNLSMFSAKDKVMTYAQAKADANNAKKDMKMGPFDVCRKVFASGVETAHMS
LIDKSDLFFHDYSLAPLFVQENYIHVRPAAAGGNLKNHLVLLSKAADSICDGDLVDKQIR
SRQTWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIIQELASHMSLK
TLSSKEAINLDYLPYLRSAVLEPLQSQGAEGANQSVKLMDNYDIIKEDVDNIMEISTWGG
EPDPYSKIDSKVKAAFTRAYNKESHLTPYSLHVVKKSRKGAVDPELVGDLDNESQFQEEE
EEEGLTTDAMIKQKKAKPAKEAKQMKAGDSGKGKGKGKGKGKNKD
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacatccggaggttttttgcgcccaccaaaccttcaaacagaagcaccagcactgat
gaagaaccgaagaggagaaggaagccaaaaactaaggtcacaagtcccaaatcggacgag
aaacctactggaaaacgaaagaaaagagtcataattgattcagactctgaggaagagaag
aaagagaggaagaccaagaagagcactaaagagacagctacccccacagagaagaaacac
ccagtgacttatgtgtctgattctgactcagatgatacatttgtgactctgaaaaagtcc
tccaaatccagagaaaatggaacagttaaaggcaagaaggaatcagacttgaaaaaaaca
aaagaggtaaaaacatcctccagtaaatctccgaccacagctgtgaaggtaagggggaag
agctctcagtccatcacctctccaaagacagcaccaaccctacccaaacagacacccacc
tcagtaatggacttcttcgggagctctagtgttcagagatcggaaaagaaaatggtggcc
agtatgagcattaaaaggaaggcagagtctgaagagtcactcagtgatgaagccattgca
cgagaacttcagatggatgatgacatggagatggagaagcagatccatgatgatgaggaa
tttgcaagaacattagccatgcttgatgaagttcccttagcgaaaaaggctcgtgtagac
tctgtttccccctcaaaggacagctctcagacaaaaacctcagagaccaaggccaagcta
aaggacacatctcctaaaacaagccccatcaagactagctccaaactggctcagatgaaa
agacaacaggaacaagtggaagtagaaaagggtgaaaagcagattaagatctctccaaaa
aaggagccgatctcacctaaaatctcagagcgggccgccacgcccaaaacaggaagttct
acaggaaagactaaatcaagtttttctacacctaaaagtgattgtgcacccattaaaact
tcaccaacaaaaccagagaatacaagtccagaggacctagaaaagaaacgggcaaataca
tcagcgtaccgtaactatctgaacagagaaggacctcgagcactggggtctaaagaaata
ccacagggagcagataactgtctggaggggtgtgtgtttgtgttgactggtgtgttagag
tctttggagagggatgatgctaagtcactaatagagcgatacggcgggaaagtaacagga
aacgtcagccgcaaaactacttaccttattttgggacgagacagtggaatctcaaagacc
gagaaggcggagagttttggcactaagattattaatgaagatcagttgttggatcttata
agaaccaaaccaggcaagaagtccaaatatgagattgcagcagaggcagagaataaatcg
gctaaaacgaggaccccagactctagaggcaaacccactcctacaaccaaaaaggcctca
ccacaagggccgagccccaataagagaagccctttagtggggaagtctaagcctggctct
gcttctacctctggatcatctggagcttctcgttcaaattcagaggtcaaaaagagtttg
agctttgataagaccaagacaatatctaccccagagaaagacggaagtagcctgttgtgg
gtggataagtaccggccacgtaatctgaagaatcttattgggcagcaaggggatcagagt
tgtgccaacaaacttctgcgttggttacagaactggcataaaaataacagtggcaatgca
aaagcaccagcagccaagtttggtaaatttgggagtaaagatgatggatctggatttaag
gcagcattgttatccgggcctcctggtgttggaaagaccactactgctgctctcgtctgt
gaggagttgggttacagctatgtggagatgaatgccagttgcacccgcagtaagaacagt
ttaaaagaagtgattgcagaatcactgaacaacaccagcattaagaacttctatactggt
gcatctcagacagtgagcagtaaacacatccttataatggacgaggtggatgggatggca
ggaaatgaagacagaggaggaattcaggagatgattggtctgataaagcagtcaaagatt
cccattatctgcatgtgtaatgaccgcaatcatcagaagatccgctcgctggccaactac
tgctacgacctgcgattccagagaccccgtgttgagcaaatcaagggggctatgatgtct
atagctttcaaagagggtctgaagatcccacccccagcactgaatgaagtcatcttggca
tccaatcaggatattcgtcaggtgctgcataatctgagcatgttctcagctaaagacaaa
gtcatgacctatgcccaagccaaagctgatgctaacaatgctaagaaggacatgaaaatg
ggtccgtttgatgtgtgtcggaaggtgtttgcctcaggagttgaaactgcccacatgtct
ttgattgacaagtcagaccttttcttccacgactactcattagcacctctgtttgtccaa
gagaactacatacatgtccgaccagccgcagcaggaggaaatctgaaaaatcatttggtg
ttgttgagtaaagcagcagacagcatttgtgatggagatttagtggacaaacagatccgc
tccagacagacctggtctctgcttcccacacaggcgatctatgcgagtgtgttgccgggg
gaactgatgcggggttatatgagtcagtttccaacctttcccagctggttgggcaaattc
tcatcagcgggcaaacacagccgcatcatacaggagctcgcttcacacatgagtcttaaa
acgttaagcagtaaggaagcaataaatctggattacctgccatatttgcgttcagcagta
ttggagcctcttcagtcccaaggtgcagagggagccaatcagagtgttaagcttatggat
aattatgacattatcaaagaggatgttgataacataatggagatcagcacatggggcgga
gagccagatccttactctaaaatagactccaaggtgaaagctgcatttacacgagcgtac
aataaggagtcccatctaactccatactctttacatgtggttaagaaaagccgtaaaggt
gctgttgaccctgagcttgtaggagatcttgacaatgaatctcagttccaggaagaggaa
gaagaggaagggcttaccacagatgccatgatcaagcagaagaaagccaaaccagcaaaa
gaggccaagcagatgaaagcaggggattctgggaaggggaaaggcaaggggaaaggaaaa
ggaaagaacaaagactga
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