Myxocyprinus asiaticus (Chinese sucker): 127443683
Help
Entry
127443683 CDS
T08782
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127443683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127443683
Membrane trafficking [BR:
masi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127443683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
Beta-prop_WDR5
zf-RING_5
zf_RING_Vps8_fungal
Beta-prop_EML_2
zf-RING_2
Beta-prop_WDR3_1st
zf-RING_UBOX
WDR55
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_HPS5
zf-RING_11
EIF3I
ComK
PHD_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
127443683
NCBI-ProteinID:
XP_051558425
LinkDB
All DBs
Position
7:complement(25675192..25859922)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAESPDSRSLVSASSQLNLMEIEAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFILEDT
CLLNTENIDTHSCETSSLASSDSGDRTHLKRRRKAMETNATVHGSVLRCNVLKGISAQIV
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFDQNQALRLCLGTTATGAEYGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDNPTLAVCNDSGGSV
FELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAGPELKEHPITQYSLLAMASLTKILL
IGLKPSLKVWMTFPYGKTDPGSIPLLAWHFVAVQKAVNPVLAFCRGDTIHFLLVKKDDSG
TIHVIKQRQLQLNCDLISLSWINPRTLVLMDSTEKLRVVDRPSQDELETVDVAELQLVYN
SSHFKSLATGGNVSQALALVGEKACYQSVCSYAGQIIYLGTKSVHIMTLRNWRERVDHLL
KQEKFMEALSLAWSFHEGTAKAVLAYCKGYRWTTKATSSNYHFKNCLFADPAKRKGVVAD
KMVEILLQYVDCSLKKCPEQGKIQVMEQHFQDMVPVMVNYCLLLQRTFLPGRTRGTRFLS
LRDLLFNQIYPRLVENSVAKGVFLESLEPYILSERIGCLTAPVMRDLLSYFQENGMMESV
EGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVFNSGMNDYISPMEKLLQVIGPPLRDEK
PLTDEHVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPQVKNQVFEFLICLHTVEAEQEEE
VYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALEYQQRIVDILLKVMVDNSDFTPSQVG
CLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDDDSRHTERQQVLLELLQVGGVVQFD
EGRLLDLAEKAEFYQICEFMYDKKHHFDKIVDCYLKDPLRKEELFNYIHNILSMPGYSPE
EKQCVWVKTLQHVKDLVSINSSKAAELVAVHFADEVQSIIATLQDDYLIFQFLKCLLDPS
SREGLNPKAVLKLGPDLHELLVDLMCQLSPQQVTAFLKTSQDYRLEEAIQITEKHKLHEP
TAYLLEKKGDVQGAFEVLLQTLKGKLHKLALEGSQADRPNIEEEETGDEVQSPLQRVEEA
LRDIIALCQRSSHGLNQQQREALWFPLLEAMMSPQKLLKGPDAKYTSDALKELTMKVLNS
MSSFITPPAIIQRILQDPVYGKGKLAEIQGLILGMLETFNYEQTLLETTTNLLNSDLHWS
LSHLRKAVSRGLHPKQDHCNICLQQYKRRQESEEEIIIFSCGHLYHCLCLQRKESGILSE
RLHSWSCYKCTSSQGSRPADRPSVEISRSRSTSLAQTKVSSAHRGIVAEAHRRKMLTEAT
LDVQQTQAWDQLRSIYRGPSRLAILTELTHSHGNERAGLSNPTHPGTGSIYHSENFQLKL
SPPPLVEE
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatctccagacagccgcagtcttgtgtctgcgtcctcacagctcaatttaatg
gaaatagaggcgattgatgataaggagtttgacattcctcaagtggacactcctccgact
ctagagagcatcctgaatgagcctgaagatgaggatgagccatttattttagaggatacg
tgtctcctgaacacagagaacattgatacccactcgtgtgaaacctcctctctggccagc
tctgacagtggtgaccgcacacacctgaagaggaggaggaaagctatggaaactaacgct
acagtacacggatccgtccttagatgcaatgtactgaaaggcatctcggcccagatagta
tctgctgcggataaagttgatgcaggcttgccaacggcaataactgtttccagtgtgata
gccgtggggacgtcgcatggtctggccttagtatttgatcagaaccaggccctgcggctg
tgtctgggcaccacagcaactggagcagagtacggggcagtgtcagctctcagtattaat
catgactgctcacgactgctctgtggctttgctaaaggacagatcaccatgtgggatctg
gccaatggtaaactgcttcgaactatcacagatgcccacccacctggcactgcaatccta
catgtcaagttcactgacaacccaacattagctgtgtgtaatgatagtgggggatcagtg
tttgaactgtcattcaggagggtgatggggatgaggacatgtgaatccaggtgtttattc
agtggttctaaaggagaggtttgctgtgtggagcctcttcatgctggacctgaactgaaa
gaacatcccatcactcagtactccctgctggccatggcctcactcaccaagatactgctg
atagggctgaagccttcactcaaagtctggatgacttttccctacggcaagacggatcct
ggcagtatccccttgttggcttggcattttgtggcagtgcagaaagcagtcaaccctgtt
ctggccttctgcagaggagacaccatccacttccttctggttaaaaaggatgattctggg
accatacatgttataaaacagcgacaactccaactcaactgtgacctcatcagtctgagc
tggataaacccccgtacattggtgttaatggacagcacagagaagctgcgtgtggtggac
agacccagtcaggacgagctggagacagtggatgtggccgagcttcagctggtttacaat
agcagccattttaaatccctcgccaccggaggaaatgtcagccaagccttggctctagtt
ggagagaaggcatgttaccagtctgtgtgcagctatgcaggccagattatttatctagga
acgaagtctgtgcatatcatgacactgaggaactggcgtgagcgtgtggaccatctgctg
aaacaggagaagttcatggaggctctctctctggcttggtccttccacgagggcactgcc
aaagctgtgctagcatattgcaaaggatacagatggactactaaggctacatcttcaaac
taccacttcaaaaactgtttatttgcagaccctgctaagagaaaaggtgtggttgcagac
aagatggtggagattttgttacagtatgtggactgctctctgaaaaagtgtccagagcaa
ggaaagatacaggtgatggagcagcacttccaggacatggttcctgtcatggtgaattac
tgtctcctcctacagaggacgtttttgccagggaggacacggggaaccaggtttctttca
ctcagggacctgctgtttaatcagatttaccctcgactggtggagaactctgtggccaaa
ggcgtatttctggagagtttggagccctacattctgagtgagcggattggatgtctgact
gcgcccgtcatgagagacctcctaagctacttccaggagaacggcatgatggagagtgtg
gagggatgcctggtccacatggacatcaccaacctggacatacaacaggtggtgcagatg
tgctgggataaccaactgtatgacgccatgatttacgtcttcaacagtggcatgaatgac
tatatcagccccatggagaaactcttgcaggtgattggtcctcctcttcgtgacgaaaag
cctcttacagatgagcatgttgtgatgggaaataaactgctggtgtacatcagctgttgt
ttggcaggacgggcctatcctttgggggacattcctgaagatctggtccctcaggtgaaa
aatcaggtgtttgagttcctcatctgtctacacacagtggaggctgaacaggaagaggaa
gtgtatccctacatccgaactctcctccacttcgacactcgagagttcctcaatgtcctg
gcattgacatttgaggacttcaagaatgacaaacaggctctggaatatcagcaaaggatt
gtggacattttactgaaggtcatggtggacaattctgacttcacaccgtctcaggtcggc
tgtctttttaccttcctggcacgccagctcgctaaacctgataacaccctctttgttaac
cggaagctgtttgaccaggttctggagttcctgtgtagtccagatgatgactctagacat
acagaaagacagcaggtacttctggagctgctgcaggttgggggtgtggtccagtttgat
gaggggcgtctcctcgaccttgcagagaaggcggagttttatcaaatctgcgagtttatg
tatgacaaaaagcaccattttgacaaaatcgtcgattgctacctcaaagaccctttgaga
aaggaggagctcttcaactacatccataatatcctgtccatgccgggctacagcccagag
gagaaacagtgtgtttgggtcaaaacccttcaacacgtcaaggatcttgtcagcatcaac
tcatctaaggcagcagagttggtagcagtgcactttgcagacgaggtgcagtctatcatc
gcaactctgcaggatgactatttgatattccagtttctgaagtgcctcctggaccccagc
tccagagaaggcctgaatccaaaggctgtgcttaaactgggcccagatcttcatgagctc
ttagtggacctaatgtgtcagttaagtcctcagcaggtcacagccttccttaagacctct
caagactaccgactggaggaggccatccagatcacagagaaacacaagctgcatgaaccc
acagcctatctgctggagaagaagggagatgtacagggagcctttgaagtgctgctgcag
accctgaagggcaaactccacaaacttgctctagagggctcacaggctgacagacccaac
attgaggaggaggagacaggtgatgaagtgcagagtccattgcaaagagtggaggaagct
ctgcgtgacatcattgctttgtgtcagaggagctcgcacggcctcaaccagcagcagaga
gaggctctgtggtttcctctcctagaggcaatgatgtcaccacagaaactactcaaaggt
cctgatgccaaatacacttcagatgcactaaaagagcttaccatgaaagtcttaaacagc
atgtctagcttcatcaccccacctgccatcattcagcgtatcctgcaggaccctgtatat
gggaaaggaaagttggctgagatccagggtctaattttaggaatgctagagaccttcaac
tacgaacagaccttgttggagacaaccaccaatctgctgaactctgatcttcactggtct
ctgtcacacctgcgtaaggcggtcagtagaggactccacccgaaacaggatcactgcaac
atctgcttacagcagtacaagagacgacaggagagtgaggaggagatcattatcttcagc
tgtggtcacctgtaccactgcctgtgtcttcagcgtaaagagtcggggattttgagcgag
aggctacactcatggagctgttacaaatgcacatccagtcaaggttcacggccagcggac
agacccagcgtagagatctcacgatcacgctccacgtctctggcacagaccaaagtgtca
tctgctcatcgtgggattgtggcagaggctcataggagaaagatgttgactgaagccact
ctagatgttcagcagacacaggcctgggatcagctccgctctatctacagaggaccatct
aggctggctattctgacagaactcacccattctcatggcaatgagagggcaggcctttca
aaccccacccatccaggaacaggaagtatttatcacagcgagaacttccagttaaagctt
tctcctcctccactggtggaagagtag
DBGET
integrated database retrieval system
