Myxocyprinus asiaticus (Chinese sucker): 127443827
Help
Entry
127443827 CDS
T08782
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03440
Homologous recombination
masi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127443827
03460 Fanconi anemia pathway
127443827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127443827
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127443827
FA (Fanconi anemia) pathway
Downstream FA components
127443827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
GIDA
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
127443827
NCBI-ProteinID:
XP_051558734
LinkDB
All DBs
Position
7:46253372..46266136
Genome browser
AA seq
1450 aa
AA seq
DB search
MTEEILPNEDKERLRRRLELLKREYERTAQRLQRAERCDAIRRHVQSRVSDQNRLMQIES
SSSSHTSYDNQKTLQLQTSIDANRNSPGFYAVKKIHAIQFQLAEIASTSPLASPACRRSS
AHRLRSKRSRLRLQNKERESDTDNTQEKERDNIYDREIIQIKEDSNFIEKENSLKQGRNE
GKEKDGNDEMTKEKNFEMVPVVMEKNQRTEENLDDKIAKASQKLEKSRKYYLNWDQSEIK
ELVSGPENHLAVQIIHSSQEDVNVSPMNRSVENKLQSSSAESEAVHTPNKSNEMLAQMNQ
DSNKGYDESKDIKLSSMSAGLESCTLVEGLPFPVEYYVRTTRRMAASHSSVDIDAVIHSQ
LSGGRGRRRFSQSQTRGRGHMSPELSEPVCRSTDQAEHRGSTQRGKRGRPRRSTLSRASG
PKAALGCPANDSQAGCSLESKSSTQAESQPMPSPVSSVKPKPCPKDGVRGKRGRRRTTVD
KSSCLKTPTDGTMSSDSPMDCLPLLEPLTESKPNSPAESTGQSELALKKKSLPQAEPQPI
PSPGPAINLKPSPEEGVTQDFKHLPDSQLYFDSKLLSDSILYPIFRRRCQTGRPLSQSQT
SHINKDDQSPLLPSLASLIQALQEKDTKSGLLATVDLQDFHLPDEDFGQLKLERLRLSPS
VVEPFAQRPLVHNTQQSSRCQRTGGRKSNCEVHCTDDELFTPEPLDAFSSLEDSLSLCQS
DPIDQSQTKTQNTDQPEKHFDTVNNLKTIAKTESTISETIDETTLEVITDKDRVPTTSTD
QMHIQTVLNKDFETSEMEKVVLNISPQAESQIHMQNESKTSSLCPTVLNLSPSLTTHTQR
GQDLALPSLGMTPHFLTPGSPIDFHPHLLSPSGPQRSLSLRCVSPVKTFVNVKTNTSTKS
ADATEDQEDFGTQCQTQISQDIMTRAQNMVKPGTTPQKNIVPGFEFLIKPESETQATCIS
ENEWEHECSFNTKSNLECKIQTNWTPDIDAQLHSIPESGSFNIVSESAAQLKPDFQTQNH
PETESQTFEDSELRAKTQSYAIANVKLSQCGDESGDVSQTPIETTSLDTSTNQRTERQTE
CTTIGDQSKDLTNSSPNKRTQLNEETVPATPLPDASRCSAVLQEIHTFKALEGGCVLDLC
SVQWPSEDCCICVAGEWSVCLWAQRKGVQLWSLLHTWTFAQSVMSLQAIPDSLGLLCVTL
GHLEITEARVLCCPSMDGPFSQTMVCKDALQAVVCVSDCRLACCSTPGDQQKVSVLKFHQ
EGRVVDTLPLVSAKQNIRTLAAVEGEKDALIGWTECKTFVIWSMKSGHLLQTVYLEKTLT
MTNCMRGYSYRGVLCVLLQNTGNVCDEESNTSLFTLIAMNPLTGKHITLASISNPDQHIE
QLIDGDVFGSGLVGVFQSGHLVVWDLRGSVAKVVGVLDEMCRLARWAGSNTLLTGYLNGD
VSVYHYKSTS
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagattctccctaacgaagacaaagagagattgaggagaagactggagctt
ctaaagcgagaatatgagagaacggcacagagactgcagagagcagagcgctgtgatgca
attcgtaggcatgtgcagagcagagtctctgaccagaacagactcatgcagattgaatca
tcatcatcatcccacacatcttatgataaccaaaagactctgcagttacaaaccagtatt
gatgcaaacagaaacagccctggtttttacgcagtaaagaaaatccatgcgatccaattc
caacttgccgagatagcatccacttccccattggcctctcctgcatgcagacgaagctct
gcccaccggctgcgttctaagcgcagtcgactgcggctgcaaaacaaagaacgagagtca
gacactgacaatactcaagaaaaagaaagagacaatatttatgatagggagatcattcaa
ataaaagaggacagtaactttattgaaaaggagaatagcctcaaacaagggagaaatgaa
gggaaggagaaagatgggaatgatgaaatgacaaaagaaaaaaactttgagatggtgcca
gtagtgatggagaagaaccagagaacagaagaaaatttagatgataaaattgctaaggca
tcacaaaaactggagaagtctaggaaatattatttgaactgggatcaatcagaaatcaag
gaattggtttcaggtccagagaatcatttagcagttcaaatcattcacagtagccaagaa
gatgtaaatgtctctcctatgaatcgatctgttgagaacaagttacagtcaagttcagct
gagtctgaggcagtacatactcccaacaaatcaaatgagatgcttgcacaaatgaaccag
gattcaaataaaggttatgatgaaagcaaagacattaaactatcaagtatgtctgctggt
ctggaatcttgcacattggttgagggtcttccatttccggtggagtattatgtccgaacg
acacggcgcatggctgcatctcacagctctgttgatatagatgctgtcattcacagccag
ctctctggagggcggggcagacgcaggttcagccaatcacaaacgcgtggtagaggacac
atgagcccagagctttctgaaccagtctgcagatctactgaccaggccgaacatagagga
agtactcagagagggaagagagggcgtccaagaagaagcactttaagtagggcatcaggt
cccaaagctgctctaggttgtcctgcaaatgattctcaagcaggctgttcactagaatca
aagtccagcactcaagcagaatctcagccaatgccatcacctgtgtcttcagtgaaaccg
aaaccctgtcccaaggacggagtaaggggaaagagaggtcgtagaagaactactgtagat
aagtcctcatgtctcaaaacacctacagatggtacaatgtctagtgattcgccaatggat
tgtttgcctcttttggagccccttacagaatcaaagcccaactctccagctgaatctacc
ggccaatcagaattggccctcaaaaaaaaatcacttccacaggcagagcctcagccaatt
ccatcacctggacctgcaataaatttgaagcccagtccagaggaaggagttacccaagat
tttaagcaccttcctgattctcagctttactttgattcaaaactcctctctgattctatt
ttataccctattttcagaaggcgttgccaaactggaagaccattatctcagtctcaaaca
tctcacataaataaggatgatcagtcacctcttctgccatcattagcttcactcattcaa
gctcttcaggaaaaggatacaaaaagtggacttctggcaactgttgacctccaagatttc
cacttgcctgatgaggattttggccagctgaagctagagagactgcgcttgtccccttca
gttgtagaacccttcgctcaacgtcctctagtacacaatacacagcaaagcagcaggtgc
cagagaacgggtgggagaaagagtaattgtgaagtacactgcacagatgatgaactgttt
actccagaacccctagatgccttctcttctcttgaggatagtttatctctttgtcagtca
gaccccattgaccaatcccagactaagacacaaaacactgaccaaccggaaaagcacttt
gacactgtaaacaacctaaagacaatagcaaaaactgagagcacaattagtgagacaata
gatgagaccacactggaagttatcacagataaagaccgagtgccgaccactagcaccgac
cagatgcacatacaaacagtcttgaacaaagactttgaaacctcagaaatggaaaaggtc
gtgcttaacataagtcctcaggcagaatcacaaatacacatgcaaaacgagtccaagacc
agctctctttgcccaacagtattaaatctcagcccctctttgaccacacacactcagaga
gggcaagatcttgccctgccatctttgggaatgacccctcactttttgactccaggttca
cccatagacttccacccacatctcctttccccttctggtccccaaaggtctctttcctta
aggtgtgtgtctccagttaaaacatttgtgaatgtcaaaactaatacctcaacgaaaagt
gcagatgcaactgaagaccaagaagattttggcacacaatgtcaaactcaaattagtcaa
gacattatgacaagagctcaaaatatggtaaaaccagggaccacaccccaaaaaaacatt
gtaccaggttttgaattcttaatcaagccagaatcagagactcaggccacatgcatctct
gagaatgaatgggaacatgaatgcagctttaatactaaaagcaatcttgaatgtaaaatt
caaaccaattggacaccggacattgatgcccagctccacagtattcctgaatcagggagt
tttaatattgtttctgaatctgctgctcaacttaaacctgatttccaaacccagaaccat
cctgaaacagaatctcaaacctttgaagactctgagctcagggctaaaacccaaagttat
gccattgcgaatgtgaaactgtctcagtgtggggatgaatctggtgatgtaagtcaaact
cccattgagacaacctctttggacacctccaccaatcagagaacagaaagacagactgaa
tgcaccactattggggatcaatcaaaggaccttaccaattcgtctccgaacaaacggaca
caattaaatgaggaaaccgttcctgcaacacctttgccagatgcaagccgttgttctgca
gtccttcaggagatacacacttttaaggctttggagggtggatgtgtgttggacttgtgc
tcagtgcaatggccgtcagaggattgctgcatatgtgtggcaggagaatggagtgtttgc
ctttgggctcagaggaagggagttcagctgtggagtcttttacacacctggacatttgca
cagtctgtcatgtctttgcaggcaattccagattctttaggcttgctctgtgtgactttg
ggtcacttggaaatcacagaggcaagggttctctgctgtccaagtatggacgggccgttc
tctcagactatggtttgcaaggacgcattacaagcagtggtgtgcgtgtctgactgtcga
cttgcgtgttgctccactcctggagatcagcagaaagtcagtgtgttaaaattccatcag
gagggcagggtggtggatactcttcccctggtttctgctaaacagaacattcgaacccta
gcagctgtagaaggagaaaaagatgctctgattggttggacggaatgtaaaactttcgtt
atatggagcatgaaatcaggccacctgcttcagactgtatacctggaaaagactttaacc
atgacaaactgcatgagaggatattcttacagaggtgtgctgtgtgtattacttcagaat
acaggcaatgtgtgtgatgaagagagtaatacatctctctttactctgattgccatgaat
ccactcacaggcaaacacatcacacttgcatccatcagcaaccctgatcaacacatagaa
cagttaatagatggcgatgtctttggctctgggcttgttggtgttttccagtctggtcat
cttgttgtttgggatctcagaggaagtgtggctaaagttgttggtgtgctggatgagatg
tgtcgactagcccgatgggcggggtcaaacacactgctcacaggatatctgaatggggat
gttagtgtgtatcactacaaatctacatcgtaa
DBGET
integrated database retrieval system