Myxocyprinus asiaticus (Chinese sucker): 127444027
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Entry
127444027 CDS
T08782
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9-like isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127444027
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127444027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
127444027
NCBI-ProteinID:
XP_051559122
LinkDB
All DBs
Position
1:34710242..34821657
Genome browser
AA seq
2948 aa
AA seq
DB search
MTDPIMDFFDDPNIFGGGLDSLVQDDPGFTPGTVSLEDELNLGPGFEPLLVDAGSRPPAS
TIQHGIPYSQPVGHFDTMKSQSFSGPERGNNGGRAFLSQQQQFQDHSMNQVPQTNGLFLN
NSPMWGNHDQNGNNTLNQHIKHHQQDQHKQFQQQQFQQHQVQHQHQQYSQQHLQQRQLPI
SNQQHLPHQQTVQQGLHHLGKNYQDHPGFYYQGNVSQNHSQQGHHNSLIVDGSPFHPVVA
QGGHSQSKPYLEASVMPVSSQQHSGFQVAQEVQGFTVGPGLQDNDLGFPVQSSSATHSFP
SGSASHASSYPTAHYSLPGQPPPVVNATRSYSSAPVSLTTSSTAIPSSSPNLLDTSCPFL
SASGMEHKRQQVEIPGSPAQQCHFHGMQSSKLSHNPFGSSEVFSDSLNSFSVAKQRNCDM
AVHSVTNQIENSSNGFQALEEALLGEQHGERLEDLGKAPDLLGDELLPQLESLIQDESSN
HSWINAGLGDEQQEKEEIMEDGHNFPVDINRQPPKNTNGPSSQARVLSPPVKSSSSSSSS
SSSYVSVSEKRVQKRQQQQQMDVSISEDKQQKANRIISEAIAKARERGEKNIPRVMSPES
FPSSSSQHRHRAGASKSKGKDKRSKNARIVSSSKPKQKAQIGKIVIKFGKKKRKKAESSE
ELSDDDRPPRRSSKDDDSKRRSNRKVKRKKYEEDGEARLSEEEMKVVVKAKKSNSNAHKE
PAVQLFVENPSEEDAAVVDKIMASRVVKKEVSPGVLVDIEEYYVKYKNYSYLHCEWATDQ
QLVKDKRIQQKIKRFKIKQAQKAHFFADIEEDPFNPDYVEVDRVLEVSYCQDKDTGEPVV
YYLVKWCSLPYEDSTWELKEDVDQTKIEEFKQLQAVKPLTNRMERPPASHWKKREQSREY
CNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLDEIYRIGIKGPFLII
APLSTIANWEREFRTWTHLNVIVYHGSVVSRQMLQQYEMYFRDAQGRAIRGAYRFQAVIT
TFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVE
ELFSLLHFLEPTRFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKE
ETIIEVELTNIQKKYYRAILEKNFTFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAE
EKIMEDFKEVYSPTAFDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDIL
EDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSM
SGRDNSLGGGGQIQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTI
TIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDLDTVNGRNSLVIDTPRV
RKQTRPFSATKDELAELSEGESSGEDKPKLRRPHDRLNSYGRTECFRVEKNLLVYGWGRW
KDILAHGRFKRQLSERDVECICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRTKELQN
HLGLSTPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCNKVLLR
VRMLYYLKQEVIGAQCQKVLDGAEASEIEIWVPEPDHSELPALWWDTLSDKCLLLGVYKH
GYEKYNTIRADPALCFLERVGRPDEKAIAAEQRANDFMDGDVDDPEYKPAPALLKDDMED
DASSPGDLAITDAGGEGGSVLDGGGGNLGASAGVYWPSPSALTARLRRLITASQRFTKSR
QILQIHQTQRAMTPAPYTLSPTLSDTLNPKMVAKIERQQRWTRREEADFYRVVSTFGVVF
DPDLGRFDWTKFRAMARLHKKTDESLHKYLCAFISMCRRVCRLPAREGDMVDSSLAIQPI
TEERASRTLYRVELLRKIREQVLRHPQLYERLALCQAGPDLPVWWEPGSHDRDLLLGAAK
HGVSRTDYHILRDPELCFMAAQRNYSQNKGTAAQVQAQNQILPLGQSHIPTPIQHIQFKE
ASALTPFNQREDLTGLKEEPLSEREEEGGEREHKIETPSIRPPTPSGVEEKHDVHDKRGE
NERRMVAARTKPLTPNSVTRKQKKLSKRSRKEARRGSRSDSDSDGSSSSSSSSSSSRSSS
SSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSEDSDSEEVPKNVSAVPGVKGFDEDSVA
SVNTTQDDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKGKWPG
VRRAYEGSAVNSFYTTKLLDNAGTLADDPSASPQGSKVKTHVADREKEFSVKINNQEGSL
KLTFQKQGLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLADYTKTQNSYPQVLAGQM
HLNGVIDGQPVVKKRRGRRKNVEGMDLLFMNRNKPPMMPEQFPAGWSGGVAGTSAPPGLS
TPQGPGQGPVAQDAEIRVPVISLKDGTRLAGEDAPKRKDLDQWLKEHPGFVADVGAFIPT
ANKLQSQNKPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLCRFL
QENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNAIAKAATVTSA
SANAALGLNPLLTNGLLAGLDLPSLQAFQHNLQSLQSLQLTTGLMGLPHDPTNMAAMFPM
MLPGMTGLPNLLGMSGLLGKPSQEVAGVASTGDEDGKKKSSRDSTTPKGSAQTSSPDSKV
ERTEAQSSKATTSSQISASASGHPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAANTQ
PTPPPQPAASEATPQEPGCSEEKDSDEGEEPDEKKDNSGPEGSEKAESSSESDSSSESSE
DSDSSDED
NT seq
8847 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccccataatggacttttttgatgaccctaatatatttgggggagggcttgac
agccttgttcaagatgacccagggtttacccctgggactgtgtccttggaagatgaactt
aacttgggccctggctttgagcctcttttggtggatgcagggtccagacctccggcttct
accatccagcatgggataccctacagtcaacctgtggggcattttgacactatgaagtca
cagtctttttctggtccagaaagaggtaacaatggtggaagagcctttctgtcacagcag
cagcagtttcaagatcattctatgaaccaagtgccccaaactaatggactgtttcttaac
aacagccccatgtggggaaatcacgatcagaatgggaataacacactgaatcagcacatt
aaacaccaccaacaagatcaacataaacaatttcagcagcaacagtttcagcaacatcaa
gttcagcatcagcatcagcaatacagtcagcaacatcttcaacaaagacaacttccaatc
tcaaaccagcagcacctcccgcaccaacagacagtccagcaaggtttgcaccaccttggc
aagaactatcaggatcatcctggcttttactaccagggcaacgtctcccaaaatcattcc
cagcaaggccaccataactccctcattgtggatggtagtcccttccaccctgtggttgcc
cagggtggacattcacagtccaaaccttatcttgaggcttcagtgatgcctgtgtcctcc
cagcagcacagtgggtttcaggtggcccaagaggtccaaggctttactgtgggtccaggg
ttgcaggacaatgacctgggcttccctgtgcagtcttcctctgcaactcactctttccca
tctggctcagccagccatgcctcatcctatcccactgctcattactctcttcctggtcaa
cctccccctgtagtaaatgcaactcggtcttactcctctgccccggtctctttgacaacc
tcttcaactgctatcccatcatcttccccaaaccttttggataccagttgtccatttctg
tctgcttccggaatggaacataaacggcaacaagtcgaaatacctggcagtccagcacaa
cagtgccacttccatggcatgcagagctccaaattgagccacaatccctttggctcctct
gaggtgttctcagacagtctaaactcattctctgtggcaaaacagaggaactgtgatatg
gctgtacattcagtcacaaaccagattgaaaacagcagcaatgggtttcaggctctggag
gaggccttgcttggagagcaacatggggagagacttgaggacctgggtaaagctcctgat
cttttgggtgatgagttgttgcctcagttggagtcacttattcaggatgagagctccaac
cactcttggataaatgcaggactaggggatgaacaacaagaaaaagaggaaattatggag
gatgggcacaatttcccagtggacatcaatagacagcctcctaagaacactaatggtccc
agcagtcaggcgcgggtgctcagcccaccagtgaagagtagctcctcttcttcctcttca
tcgtcctcatacgtgtccgtgtcagagaaaagggtgcaaaagcgacagcagcagcagcag
atggatgtgtccatctcagaagataaacaacagaaggccaatcgaatcatctcagaggcc
atcgctaaagcacgagagagaggagagaaaaatatcccacgtgtcatgagtcccgagagc
tttccatcttcatcgtcacaacatcgtcacagggcaggtgcctccaagtccaaaggcaag
gataaaaggtccaagaatgcccggattgtgtcatcctccaagcccaaacaaaaggctcaa
attgggaaaatcgttataaagtttggaaagaagaagcgaaagaaggccgagtcctcagaa
gaactctctgatgatgacaggccacctcgacgatcctctaaagacgacgattcaaaacgg
cgttctaaccggaaggtcaagaggaagaagtatgaggaagacggcgaggctcgactgtct
gaggaagaaatgaaggttgtcgtcaaagccaaaaagagcaactccaatgctcataaagag
cctgcagtacaactgtttgtggagaacccaagtgaggaagatgctgcagtggttgataaa
atcatggcatcacgcgtggtgaaaaaagaggtttcacctggagtattggtggacattgag
gagtactatgtcaaatacaaaaactactcgtatcttcattgtgagtgggcgacagatcaa
cagttagtgaaagacaagaggatccagcaaaaaataaaacgcttcaagatcaaacaggcg
cagaaagcacacttctttgctgatattgaggaggatccattcaatcctgactatgttgaa
gtagacagagtattagaggtctcatactgtcaggacaaggacactggagagccggttgtg
tattacttagtaaagtggtgctcgttgccatatgaggacagcacgtgggagctgaaggaa
gatgtggaccagactaagattgaggagttcaagcagctgcaggcagtaaaaccactcacc
aacagaatggagcgtcctccagcgagtcactggaagaagcgggagcaatcgagagagtat
tgtaatggcaacagtctcagggattaccagctggagggggtcaactggctgctcttcaac
tggtacaacaggcgtaattgtattctggctgacgagatgggtctgggtaagaccatccag
tccatcacgtttctggatgagatctatcgtataggcatcaaggggccgttcctcatcatc
gccccgctctccaccatcgctaactgggagagagagttcagaacctggacgcacctcaac
gtcatcgtgtaccacggcagtgtggtaagcagacagatgctccagcagtatgagatgtac
ttcagagatgctcagggtcgtgcgataagaggtgcttaccggtttcaggcagtcattacc
acatttgagatgattttgggaggctgtccagaacttaacgcaatagactggcggtgtgtc
atcattgacgaagctcatcggctcaaaaataagaactgcaagctactggagggctttaaa
ctgatgaatctggaacataaggtgttgttgacgggcactcccctacagaacactgtggag
gagctcttcagtctgctgcattttctggagcccacccgcttcccttctgaaaacaccttc
atgcaggagtttggagaccttaagactgaggagcaggtccaaaagcttcaggctatcctg
aagccgatgatgctgcgtcgtctcaaggaagacgtggagaagaagttggcccctaaagag
gagaccatcatcgaagtggagcttaccaacatccagaagaaatactaccgcgccatactg
gagaagaacttcacattcctggctaaaggtgctggccaagccaatgtccccaacctgctc
aataccatgatggaactgcggaaatgctgcaaccatccctacctcatcaaaggggctgag
gagaagatcatggaggatttcaaggaggtgtacagccccaccgcatttgatttccacctg
caggccatgattcagtcggcaggtaaactcgttctcattgacaagctgctgcccaagatg
aaggccggtggacacaaagtgctcatattctctcagatggtgcgctgcctcgacatcctg
gaagactacctcatccagagaagatacctctacgagcggatagacgggcgtgtacgtggg
aaccttcggcaagctgcaatagaccgcttcagtaaacccgactccgatcgattcgtcttc
ctgctgtgtacacgagcaggtgggctcggaattaacctcacagctgccgacacctgtatc
atctttgactctgactggaacccacagaacgacctgcaggctcaggctcgctgccaccgt
attggtcagaataaagcggtgaaggtgtatcgactaatcacgcgtaactcatacgagcga
gagatgtttgatagagccagtctcaagctgggattggataaagcggtgcttcagagcatg
agtgggcgggacaacagtcttgggggaggaggacagatccagcagcagctgtccaagaag
gagattgaggatcttttgcgtcgtggagcttatggcgccatcatggatgaggaagacgag
ggggctaaattttgtgaagaggacattgaccaaatcttgcaacgcagaaccaagaccatc
accattgaatctgagggtcgaggctccacctttgccaaggccagttttgtagcttcaggg
aacagaacagacatctctttggacgaccctaacttctgggacaagtgggccaagaaagca
gagattgacttggatacagtcaatggcagaaacagtctggttattgacacccctcgagtc
aggaaacagacccggccattcagcgcaactaaagatgagctggccgagctctctgaaggg
gagagcagtggagaggataaacccaaactccgccggccacatgaccgcctcaacagctac
ggccgcacagagtgcttcagggttgagaagaatctgctggtgtatgggtggggccgctgg
aaggacattctggcacatggccgctttaaacggcagctgagtgagcgtgatgtggagtgt
atatgtagggcgctgttagcatactgccttgttcattaccgtggagacgacaaaattaag
agcttcatgtgggatctgatcgcccccacagaggatggcaggaccaaggaactgcagaac
catctgggtttgtcgactccagtaccgcgaggcaggaaaggaaagaagatgaagactcag
tccagctcgtttgatatccagaaggcagagtggatccgaaaacacaatccagagcacatg
ctgtctgatgacggctacaaaaaacatctgaaacaccactgcaacaaggtgctgttgagg
gtcagaatgctgtactatctcaaacaggaggtgattggagcacagtgccaaaaagtgctg
gacggagctgaagccagtgagattgagatctgggttcctgagccggatcattcggagttg
cctgctctgtggtgggacactctctcagacaagtgtctgctgttaggagtctataagcat
ggttatgagaagtacaacactattagagcagatccagcactgtgtttcttagagagggtt
ggtcggccagacgagaaggccattgctgctgaacagagagcaaatgattttatggatggg
gatgtggacgaccctgaatacaaacctgctccagctttgctaaaggacgatatggaggat
gatgcttcctcaccaggagacttggccatcactgatgcaggtggagaaggagggtctgta
ttagatggtggaggtggtaatctgggtgctagtgcgggggtgtactggccctcaccctct
gcactgacggctcggctgcggcgtctgatcactgcatctcagcgcttcaccaagagcaga
cagatacttcagatccaccagacacagcgggccatgacccctgccccctacactctgtcc
cccacactcagtgacacactcaaccccaaaatggttgctaagattgaaagacaacaacgg
tggacacggagagaggaggcagatttctatcgtgtggtttcgacatttggggtagtgttt
gatccagacttgggtcgtttcgactggaccaagtttagagccatggctcgactacacaag
aaaactgacgagagtctacacaagtacctgtgtgcctttatttccatgtgcaggagggtc
tgtcgtctccctgctagagaaggagacatggtggactcctctcttgccattcaaccaatc
acagaggagcgtgcatcccgtaccttataccgtgtggagctgctgcgaaagataagagaa
caggtgttacgtcatcctcagctctatgagcgtctggcactctgccaggcgggaccggat
cttccagtgtggtgggaaccaggatcccacgaccgggatctccttcttggggcagccaag
catggtgtcagccgaacagactaccacatcctccgagacccagagctctgcttcatggca
gcccagaggaactacagccagaacaagggaacagcagcacaagtccaagcccagaatcag
atacttccgctgggacagtctcacatcccgacccccatccagcacattcagtttaaagag
gcttcagctttaactccctttaatcaaagagaggatttaactggactgaaggaggagccg
ctgtcagagcgagaggaggaaggtggagagagagagcacaagatagaaacaccctctatc
agacctcccacaccttcaggagtggaggaaaaacatgatgtccatgataaaagaggagag
aatgagaggcggatggtagcggccaggacaaaaccgcttacgccaaactcagtgactcga
aaacaaaagaagctaagtaaacggagccgcaaggaggccaggagggggtcgagatcagac
tccgactcggatggctcctcgtccagctcttcatcaagttcttcatcgagatcttcttcc
tcatcctcgtcttcgtcacgttcaggatccagttcctcatcctcgtcttcctcctgttct
tcaggctcgtcgtcttcatcgtcgtcatcatcgtcttcagaggacagtgacagtgaggag
gttccaaagaatgtgtcagcagtgcctggtgttaaaggctttgacgaagacagcgtggcc
tcagtcaacactacacaagatgacatgcaggacagccatgtgaccaatggtatctctaac
cctccccaccctttccagggaggctacatgcttgctgcctcctactggccaaaggaccgt
gtcatgataaaccggttggacagtatatgtcaggcagtgttgaaggggaaatggccaggg
gttcggcgtgcatatgaaggtagtgcagtgaattctttctacaccaccaaactcttggac
aacgcaggcactctcgcagatgacccctcagcctcccctcagggttcaaaggtgaagacg
catgttgcagacagagaaaaggagttctcagtcaaaatcaataaccaggagggtagcctt
aaactgacattccagaagcagggcctgcctctgaagcgccccctggagggtgaggaggga
cctctagcccagcagcagtacttagcccggctacaagagctacagaacgcatctgatact
agccttgcagactacaccaaaacacagaacagctatccacaagtgctggcagggcagatg
catctgaatggagtgattgatggacagcctgtggtgaagaagaggagaggaaggcgaaag
aatgtggaggggatggacctactgttcatgaacagaaacaagccccctatgatgccagag
cagtttcctgctggctggagtgggggtgttgcaggtacgtctgctccccctggactgagc
acacctcaaggacctggtcagggaccagttgcacaagatgcagagatccgtgttcccgtc
atcagcctcaaagatgggacgcgactggccggagaagacgctcctaaacggaaagatctt
gaccagtggctgaaggagcacccaggctttgtggcagatgtgggagcttttatcccaact
gcaaataaactgcagtctcaaaacaaaccgaaacagaagagacatcgctgcagaaacccc
aacaaaattgacatcaacagcctgactggagaagagagagtacagatcatcaacaggcga
aatgcacgcaagattggtggtgcatttgctcctccgctgaaagatttatgtcggttcctg
caggagaatccagaatatggcgtcccacctgagtgggcagatgttgttaaacagtctggt
taccttcctgaaagtatgttcgaccgcatcctgaccggccctattgttcctgaagaggtg
agccggcgaggtcgacgtcccaaaaatgcaattgctaaagcagccacagtgaccagtgca
agtgccaatgcagccctggggctcaacccactactaaccaatggcctcctcgctgggctg
gatctgcctagtctccaagctttccagcacaaccttcagagtctccagtctctccaactc
accactggcctcatgggactgcctcacgacccaaccaacatggctgccatgtttccaatg
atgctgcctggcatgaccgggctgccaaaccttctagggatgagcggtctccttggaaaa
ccttcacaggaagtggcaggtgttgcttctacaggtgacgaggatgggaagaagaagagc
agtagagactcaaccacacccaaagggtcagctcaaacttcaagtcccgatagcaaggtg
gaaaggacagaggctcaaagttccaaagccaccacctctagtcaaataagtgcttctgct
tcaggccacccactggccctcaaccccctcctcctctctagtatgctctacccagggatg
cttcttactccaggccttaacctgcctgtggccaatcagccgcaagctgcaaacactcaa
ccaactccaccaccacaacctgctgcctctgaagccacgccccaagagcctggctgttca
gaggagaaagacagcgatgagggggaggagcctgatgaaaagaaggataacagtggtcca
gagggctcggagaaggcggagtcatcctccgagtctgacagctcctctgagtcatcagag
gattccgattccagcgatgaagactga
DBGET
integrated database retrieval system
