Myxocyprinus asiaticus (Chinese sucker): 127444076
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Entry
127444076 CDS
T08782
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127444076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127444076
03036 Chromosome and associated proteins [BR:
masi03036
]
127444076
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127444076
Coactivators
SAGA/TFTC/STAGA complex
127444076
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127444076
STAGA complex
127444076
TFTC complex
127444076
SAGA complex
127444076
SLIK complex
127444076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
TFIID_NTD2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
RMC1_N
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
PEP5_VPS11_N
PROPPIN
WD40_like
Beta-prop_ELP1_1st
TRIP13_N
Motif
Other DBs
NCBI-GeneID:
127444076
NCBI-ProteinID:
XP_051559205
LinkDB
All DBs
Position
7:3479573..3489366
Genome browser
AA seq
603 aa
AA seq
DB search
MKRVRTEQIQYAVTQYLKKRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSDPQQYETQFSRLRSFLQDAEAPLVKEVRGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSLFQQDPEQKAIVDLLRGAVTLQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSVICWVLSTHIQVEVTAARQTDYQLYGAGLGTGNANSTSSSSTTWTAVDGSDGTEPV
EVTAGLPQNEAALEALQDCIKRVREGPPSLTTICFYAFQHTDQLLNTAEVSADSRLLAAG
FDNSAVKLWSLRARKLKAGPHRVDVSKIRLACDVLEEEADDEDASGNEIKTLRAHSGPVY
RTAFLTDGSGLLSCSEDSTVRFWDLNCFTNTVLYRGHTYPVWDVDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGALFKDLRGHTDSITSLSFSQDSSLVA
SASMDNSVRVWDIRNAHGTAQADGSSSELIGQYTGNTSNILNVQFMGCNLLLVTGTALEK
QEQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtcaggacagaacagatccagtatgcagtgactcagtacctgaagaagagg
cagtacatagatacagatggttctctaaagggcgccaaactatcccagtctgcggaggag
atggctgccagtctcacagttcagacagagtccagctgtgcaaatgtggtgtcagcggcc
ccctgccagtcagaccctcagcagtatgagacccagttctctagactgcgctccttcctg
caggatgcagaggcgcctttggtgaaggaggtaagaggcgtgttgtttccactcttcctc
tacttgcacttggacatggcacgctgtggcctgaagggggcagtagactcgttctacagt
cgcttccactcgctcttccagcaggaccctgagcagaaagccattgtggatctgctgcgt
ggtgccgtcacattgcaggatgtgacctcgaaccctaaactctgctcccttctggatcac
aagtatgtggttcacctgacagatcaagcgtacagctacctactgcgttacctgcagagt
gatgacaacagcgttatctgttgggtgctcagcacacatatacaggtggaggtgacagca
gcacgtcaaaccgactaccagctgtatggggcggggcttggaacaggaaacgcaaactcc
acttcctcttcctccactacctggactgcagttgacgggtctgatgggacggaacctgtt
gaagtcacggcggggttacctcagaacgaggctgcattggaagcgttgcaggactgcatc
aagcgtgtgcgcgagggaccgccttccctcaccaccatctgcttctatgcgttccagcac
acggatcagttgctgaacactgctgaggtgtcggcggacagccgattgctggcagcaggg
tttgataactctgccgtgaagctgtggagtttacgggcacgaaagttaaaggcggggcct
cacagggtcgatgtgtcgaaaataagacttgcctgtgacgtgctggaggaggaagcagat
gatgaggatgcctcaggcaatgagatcaagaccctgcgtgctcacagtggtcctgtgtac
cgcacagcattcctgacggatggctccggtctgctgtcatgttcggaggactccaccgtc
cgcttctgggacctgaactgcttcaccaacaccgtcctgtaccgtggtcacacctacccc
gtctgggacgtggacgtcagtccctgcagcctgtacttctcgacggcgtctcacgaccgc
accgcccgcctctggagctttgcccgcacatacccgcttcgtctctacgccggccacctc
tctgacgtggactgcgtcaaattccaccccaactccaactatgtagcgacgggctctact
gataaaaccgtgcgactgtggagcacgcagcagggggcgtctgtgaggttgtttactggg
caccgtggccccgtgctctcgctcgccttctcacccaacggaaagtacctggcgtcggct
ggagaggaccagagactgaagctgtgggacctggcatctggtgctctgtttaaagacctc
cgtggtcacaccgacagcatcaccagcctctctttcagccaggacagcagtctggtggct
tctgcctccatggataactccgtgcgtgtgtgggacatacgaaacgctcacggcaccgcc
caggccgatggttccagcagcgagctgattggacagtacacgggcaacactagtaatata
ctaaacgtgcagttcatgggctgtaacctgctgctagtgacgggcactgcgctagaaaaa
caagaacagtga
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