Myxocyprinus asiaticus (Chinese sucker): 127444087
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Entry
127444087 CDS
T08782
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127444087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127444087
03036 Chromosome and associated proteins [BR:
masi03036
]
127444087
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127444087
Coactivators
SAGA/TFTC/STAGA complex
127444087
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127444087
STAGA complex
127444087
TFTC complex
127444087
SAGA complex
127444087
SLIK complex
127444087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
WD40_like
VPS8_N
PROPPIN
RAB3GAP2_N
LisH_TPL
LisH_PAC1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
127444087
NCBI-ProteinID:
XP_051559226
LinkDB
All DBs
Position
7:complement(7011252..7020632)
Genome browser
AA seq
751 aa
AA seq
DB search
MAAMQDGPMELDSEKETKPEILSDGSAKLPGSTGSGALSSSPLTAAPAGGAPKPEEQQTL
IAVLQFLKRNKLTESVEILRREAGLSDDQEDSQAPDAGGGGGPGAVGKGDGNGGDANSLL
SRVSIAAAAAPQTALTPMPAKSSDNQPDVSVVLSAYSQQGDPSLYQVYYSGLKNFIESVL
DCHRAELSQLFYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYQDDLRVLCGLTKKE
HMKGNEVLLDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMSRSK
SQIDSMSGSLAGEAKREVNKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKTKKDS
MGSKSKKQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLSPDNLPSICFYTFLNA
YQGLTAVDFTDDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD
EKTASESKILYGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW
DTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDR
TVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKG
HTDTIYSLKFSRDGEILASGSMDNTVRLWDAMKAFDDIETDDFTAATGHIHLPDNSQELL
LGTYLTKATAVTHLHFTRRNLLLAAGAYNSQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatgcaagatggcccgatggagctggacagcgagaaagagacaaagccagaa
attctcagcgatggctcggcgaaactccccgggagtacggggagcggggcgctctcttcg
tcgcccctcaccgccgcccccgccggtggagctccgaaaccggaggaacagcaaactttg
atcgcagtgctgcagttcttgaagcggaataaactgacggagtcggtagagatcctgcgg
cgcgaagccggtctatcggacgaccaggaggactcacaggctccagatgccggcggcgga
ggagggcccggggcagtagggaagggtgatgggaatggaggggacgcaaactctctgctc
agccgtgtgtccattgcagcagcagccgccccccagaccgccctgactcccatgcccgca
aagagctcggataaccagccggacgtcagtgttgtgctgtcagcatacagccagcagggg
gacccctctctgtaccaggtgtattacagtggcctgaagaacttcatagagtcagtactg
gactgtcacagagcggagctctcacagctcttctaccctcttttcgttcacatgtacctg
gagctggtctacaacaaccatgagaacgaagccaaggccttctttgagaagtttagtggt
gatcaggagtgctactatcaggacgatctgcgtgttctctgcggcctcacaaagaaagag
cacatgaaggggaacgaggtcctgcttgacttccgcaccagtcgtttcgtgctccgcatc
tcccgtgactcgtaccagcttctgaagagacacttacaggaaaggcacaataaccagata
tggaacataatccaggagcatctgtacatcgacatttttgacggcatgtcccgcagcaag
agccagatcgacagcatgtccggcagtctagcgggagaggccaaaagagaagtcaataaa
gccaaggtattctacgggctgctgaaggaaccagagattgaggtcccactagacgatgaa
gatgaggaagctgagaatgaggaaggaaagcccaagaagaagaaaaccaagaaggacagt
atgggctccaagagcaagaaacaagatcctaacgcccctcagcagaacagaatccctttg
ccagagctgaaggactcagacaaactggacaagatcatgtacatgaaggagagcaccaaa
agaatccgactcagtcctgataatctgccttccatttgcttctatacgttcctcaatgcc
taccagggtttgacggctgtagacttcacagatgactccagtctcttagcaggagggttt
gctgactccactgtccgtgtgtggagtgtcacacccaaaaaattacgcaaagtcaaatcc
gcggcagatctgaatctgattgataaagagtctgatgatgttctggagaggatcatggat
gagaagacagccagtgagtccaagatcctctacggtcacagcgggccagtgtacggcgtc
agcttcagtccagacaggaactatctgttgtccagttctgaggacggtacagtcagactg
tggagtctgcagacgtttacatgtcttgttgggtataaaggacacaactatccagtatgg
gacactcagttctcaccctttggttattactttgtgtctggaggacacgacagagtggca
cgcctctgggcaacagatcattaccagccattacggatattcgctggacatctagctgat
gtcacctgcactcgcttccatcccaactccaactatgtggccacaggctcgaccgaccgc
actgtacgtctctgggatgtgctgaacggaaactgtgtccgtattttcacaggtcataag
gggcccatccattctcttgcattctcacccaatggaaagttcctggcatctggttccacc
gacgggagagttctgctatgggacattggacatgggctgatgattggagaactgaagggt
catacagacaccatttattccctcaagttcagtagagatggagaaatccttgcatcaggc
tccatggataacaccgtacgactgtgggatgctatgaaggcatttgacgacattgagacg
gatgactttactgcagcgacgggccacatacacctgcctgataactcgcaggagcttctg
ctgggcacatacttgaccaaagccacagccgtcacacacctacacttcaccagacgcaac
ctgctgctggccgcaggggcgtacaactcccagtga
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