Myxocyprinus asiaticus (Chinese sucker): 127444248
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Entry
127444248 CDS
T08782
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127444248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127444248
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127444248
mRNA degradation factors
5'-3' decay
Decapping complex
127444248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
127444248
NCBI-ProteinID:
XP_051559479
LinkDB
All DBs
Position
7:4292781..4324964
Genome browser
AA seq
765 aa
AA seq
DB search
MLVKYRRNESLNEDCTLEEEGLVEEEDEIDQFNDDTFGAGAIDDDWQEEHARLAELDELV
RDGPAEAGDTTSTSADSTAHTSALLPPASSSRLHSDIDEQAGGDLAESLTRLILGSDPAI
AVVGTASSDRSHLPLMLSSQTHPSALAGQSSLLLSYQRQQKLLHRGSASLSQINSHSIWE
NNMGFSPVSVNSGLVNQTEDSPLLSIIKEVGLPKRPPALGREEGQDFSERVPPPRSSSPV
IGSPPVRAVPIGTPPKQPMSQVFNHQNNHPSAVHVRASVPLRYPPPFPERLSPNNLLSIA
NSQLSHSPFPAGVGPVLSQIQRAQLLNSQFQRGPGPLLQGGVGGFRPFFGQSGPRVSLHG
PLLSHAPIRHNTTHLHPQHRRMLNQRMQSRGSGDHVGGRGVGERKNRDPYSNLMTQREKE
WVARIQMMQLQSTDPYLDDYYYQNYYEKMEKRQERDRDNRKEHTTKLITPQVAKLEHTYR
PVQFAGSLGKLTVSSVNNPRKMIDAVVTTRSDDEEKREKQVWNKRRQILYTVEKMYSLLL
EVQDFEKKFLQTPEHQRDALLEQHKTHTLQLYNSLREKEWDDRVSDEHCLMIMSVRKGKR
LISRLLPLLSHPQAAAVVMAIARKLPALVKKDKQDQVLCWLVEPVMMVIQSMSSTSLTDL
LQELQGSEGQLTLVLQNKFGVTLLYLILSEGERMQSSDPNCQLMDDNRWTELVFSVTREL
LKVPSSVLSSPMFTPPNLVSLFSRYVDRQRLELLQEKLQITDLSR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaaaatacaggagaaatgagtccttaaacgaggactgcaccctggaggaggaa
gggttggtagaggaagaagatgaaattgaccagttcaacgatgacactttcggtgcgggg
gcaattgatgatgattggcaggaggagcatgcccgcctcgcagaacttgacgaacttgtg
cgagacggcccggcagaagccggagacaccacctccacctctgctgacagcactgcccac
acttcagcccttctaccacctgcctcttcctcccgccttcactctgatatagatgagcag
gcgggaggtgacctagcagagtcgctgactcgcctcatcctgggctcggatcccgccatt
gctgtagtgggcactgccagctcggacagatctcacctccctctaatgctgtccagccag
actcatccatctgcattagctggacagtcttctctactgttgagctaccaaagacagcag
aagctcctgcacagggggtcggcttctctctcacagataaactctcacagtatttgggag
aataatatgggcttcagtcctgttagtgttaactctggactggtcaatcaaacagaggac
agtccacttctgtccattatcaaagaggttgggcttccaaagcggcctcctgcactcggc
agagaggagggacaggatttctccgaaagggttccgccacctcgatccagctcacctgtg
attggaagtccacctgtaagggctgtgcctattggaaccccaccaaaacaacccatgagt
caagtcttcaatcatcagaacaatcacccttcagcagttcacgtgagagcgtcagtgccg
ctgcgctaccctcctcccttccccgagcgtctgtcccctaacaatctcctaagcatcgct
aactcacagttgtctcattctccatttcctgctggtgtcggtcctgttctctctcagata
cagagagcacaactgctcaactctcagttccagcgcggtcctggtccattattacaagga
ggtgttgggggttttagaccgttctttgggcagtctggccctagagtgagtctccacggc
ccactgctcagccacgcacctatccgacataacaccacccacctccaccctcagcaccgc
aggatgctcaaccagaggatgcagagcaggggctcaggagatcatgtcggagggagaggt
gttggggaaaggaaaaacagagacccgtacagtaatctgatgactcaaagagagaaagaa
tgggtagctcgaatccaaatgatgcagcttcaaagcaccgatccttacctggatgactac
tattaccagaattactatgagaagatggagaagcgtcaggaacgggatagagacaacaga
aaggagcacaccaccaaactcatcactcctcaggtggccaaactggagcacacctatcgc
ccagtgcaatttgctggctcgttaggaaaactcactgtctccagtgtgaacaatccaagg
aaaatgattgatgctgtggtgaccactcgcagtgatgatgaggagaaacgtgagaaacag
gtgtggaataaaaggcggcaaatcctttacactgtggagaagatgtacagtctactgcta
gaagtgcaagactttgagaagaagttcttgcagacccctgagcaccaaagagatgccctg
ctagaacagcataaaacccacacactgcaactctacaactccctcagagaaaaagagtgg
gacgaccgagtgagtgatgagcattgtttaatgatcatgtctgtgcgcaaggggaaacgt
ctcatctccagactcctccccttattgtcacatccccaggctgctgctgttgtcatggca
atagctaggaaactcccagccttggtcaagaaagacaagcaagaccaggtactgtgttgg
ttggtggaaccagtcatgatggtaatccagtccatgtcgagtacctccctcactgatctc
cttcaggagctgcaaggcagtgaaggacagcttaccctcgtgctgcaaaataagtttggt
gtgacgctgctttatctgattctgagtgagggagagagaatgcagagctctgatcccaac
tgtcagcttatggatgacaaccgatggaccgagttggtgttctccgtaacgagggagctt
ttgaaggtcccgtcatcagttctctcatctcctatgttcactcctccaaacctagtctca
ctgttctctcgatatgtggaccggcaaagactcgaactcctgcaggagaagttacagatc
acagacttgtccaggtag
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