KEGG   Myxocyprinus asiaticus (Chinese sucker): 127444512
Entry
127444512         CDS       T08782                                 
Name
(RefSeq) exosome complex component CSL4-like isoform X1
  KO
K07573  exosome complex component CSL4
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:masi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127444512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:masi03019]
    127444512
Messenger RNA biogenesis [BR:masi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     127444512
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     127444512
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 127444512
NCBI-ProteinID: XP_051559856
LinkDB
Position
8:complement(51086719..51094557)
AA seq 225 aa
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLVGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEVHRWCPSAGVRCSVLAHTQKSF
ARLRGYSRSICRPEPRPPHPLTTPTGTHSFEDTPSCFTHAEFSAK
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctgtgcagtacggaggactgtatc
cccggtaccggcacgtacctacggcacggctacatcttcgcctcgctcgtgggatatgtg
ctgagaaagaacgagggagaggagctcccggttatatcagtggttagagaaacagaagca
caacttttgcctgatgttggagccatcgtcacctgcaaggtgacaagtatcaacccacgg
tttgctaaagtgcacatattatacgttgggtcaacaccgctgaaagatcggtttagaggc
acaatcaggagagaagatgtgagagcaacagagaaagataaggtggagacgtacaaaagc
tttaggccaggtgatatcgtccttgctaaagtgatctctttgggtgatgtgcagtcgaac
tacctgctaaccacagcggagaatgagttaggtgtggtcgtggcccacagtgaggtgcac
agatggtgcccatcagctggtgtgagatgcagtgtcctcgcacacacgcaaaagagtttc
gcaaggttgcgcgggtacagccggagtatctgcaggcctgagccacgcccaccacaccct
ttaaccacacccactggaacacacagcttcgaagacacgccctcctgctttactcatgca
gagttctcagccaaataa

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