Myxocyprinus asiaticus (Chinese sucker): 127444538
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Entry
127444538 CDS
T08782
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127444538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127444538
03036 Chromosome and associated proteins [BR:
masi03036
]
127444538
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127444538
Coactivators
SAGA/TFTC/STAGA complex
127444538
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127444538
STAGA complex
127444538
TFTC complex
127444538
SAGA complex
127444538
SLIK complex
127444538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_RFWD3
RMC1_N
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_WDR19_1st
WD40_like
Mala_s_1-like
TRIP13_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
127444538
NCBI-ProteinID:
XP_051559910
LinkDB
All DBs
Position
8:complement(50519827..50531485)
Genome browser
AA seq
603 aa
AA seq
DB search
MKRARTEQIQYAVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVHTESSCANVVSAA
PCQSDPQQYETQFSRLRSFLKDAEVPLRKEVSGMLFPLFLYLHLDMAQCGLKGAVDSFYS
RFHSLFQQDPEQKAIVDLLRGAVTLQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICWVLSSHVQVEVTAARQTDYQLYGAGLATGNANSTSSSSATWTAVDRFEGAESV
DVTAGLPQNEAALDALQDCIKRVREGPPSLTTVCFYTFQHTDQLLNTAEVSADNRLLAAG
FDNSAVKLWSLRARKLKAGPHRVDVSKIRLACDVLEEEADDEHTSGSEIKTLRAHSGPVY
RTSFLTDGSGLLSCSEDSTVRFWDLNSFTNTVLYRGHTYPVWDLDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLVSAGEDQRLKLWDLASGTLFKDLRGHTDSITSLSFSQDSSLVA
SASMDNTVRVWDIRNAYGTTPTDGSSSELIGQYTGNTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgccaggacggaacagatccagtacgcagtgacccagtatctgaagaggagg
cagtacatagatacagatgggtctttgaagggcgccaaactctcccagtctgcggaggag
atggctgctagtctcacagttcatacagagtccagctgtgcaaatgtggtgtctgctgcc
ccctgccagtcagaccctcagcagtatgagacccagttctctagactgcgctccttcctg
aaggatgcagaggtgccgttgaggaaggaggttagcggcatgttgtttccactcttcctc
tacttgcacttggacatggcgcaatgcggcctgaagggggcggtagactcgttctacagt
cgcttccactcgctcttccagcaggaccctgaacagaaagccatcgtggatctgctgcga
ggagccgtcacattgcaggatgtgacctcgaatcctaaactttgctccctcctggatcac
aaatatgtggttcacctgacagatcaagcatatagctacttgctacgttacctgcagagt
gatgacaacagcgccatctgctgggtgctcagctcacatgtacaggtggaagtgacagca
gcacgtcaaactgactaccaattgtatggtgcggggcttgcaacgggaaacgcaaactcc
acttcctcttcctccgctacctggactgcagttgacaggtttgagggggcggaatctgta
gatgtcacagcagggctacctcagaacgaggctgcattggatgcgttgcaggactgcatc
aagcgtgtgcgtgagggaccgccttcccttaccactgtctgcttctacacattccagcac
acggatcagctgctgaacactgccgaggtgtcggcggacaaccgcttgctggcggcaggg
tttgataactctgccgtcaagctgtggagtttacgggcgcgaaagttgaaggcggggcct
cacagggtcgatgtgtcgaaaataaggcttgcctgtgatgtgctggaggaggaggcagat
gatgagcacacctcaggcagtgagatcaagaccctgcgcgctcacagtggtcctgtgtac
cgcacatcgttcctgacggacggctccggtctgctgtcatgttcagaggactccaccgtc
cgcttctgggatttgaacagcttcaccaacactgtcctgtaccgcggtcacacctacccc
gtctgggacttagatgtcagtccctgcagcctgtacttctcaactgcgtctcacgaccgc
accgcccgcctctggagctttgcccgcacatacccgctccgtctctacgccggccacctc
tctgacgttgactgcgtcaaattccaccccaactccaactatgtagcgacaggctctact
gataaaaccgtgcgactgtggagcacgcagcagggggcatccgtcaggctgtttaccggg
caccgtggccctgtgctctcgctcgccttctcgcccaacggaaagtacttggtatcggca
ggagaggaccagagactgaagctgtgggacctggcgtctggtactctgtttaaagacctc
cgtggtcacactgacagcatcaccagcctctctttcagtcaggacagcagtctggtggct
tctgcctccatggataatactgtgcgtgtgtgggacatacggaacgcatatggcaccacc
ccgaccgacggctccagcagcgagctgattggacagtacacgggcaacactagtaatatt
cttaacgtgcagttcatggcctgcaatttgctgctagtgacgggcactgcgctagaaaaa
caagaacagtga
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