Myxocyprinus asiaticus (Chinese sucker): 127445152
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Entry
127445152 CDS
T08782
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03030
DNA replication
masi03410
Base excision repair
masi03420
Nucleotide excision repair
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127445152
03410 Base excision repair
127445152
03420 Nucleotide excision repair
127445152
03430 Mismatch repair
127445152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masi03032
]
127445152
03400 DNA repair and recombination proteins [BR:
masi03400
]
127445152
DNA replication proteins [BR:
masi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127445152
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127445152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_7
AAA_30
AAA_33
Rad17
AAA_16
AAA_17
RuvB_N
AAA_14
nSTAND3
RNA_helicase
AAA_18
BRCT_2
NTPase_1
AAA_19
SKI
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
127445152
NCBI-ProteinID:
XP_051560956
LinkDB
All DBs
Position
8:3199910..3222473
Genome browser
AA seq
1130 aa
AA seq
DB search
MDIRRFFAPTKPAAPKSSNGSTSTDEEPKKKQKSKSVKSPKSDEKPTGKRKKRVIIDSDS
EEEKKSKKSTKETAAPTEKKHPVTYVSDSDSDETFVTLKKSSKARENGTVKGKKASDSGK
TKEVKTSSSKSPTKSPTTAVKGGTKSSQPITSPKTAPTPPKQTPTSVMDFFGSSSVQRSD
KKMVASTSIKRKAVTQESEESLSDEAIARELQMDEDMEMEKQIHDDGEFARTLAMFDEAP
LAKKARVDPVSPSKSSSQAKTLETKPKLMDPSPKTSPIKTSSKLAQMKRQQEQMNEERKK
VVRGEKQIKISPKKEPISSNSSERAATPKSGRSSTPKSHGAPIKTSPTKPENTSPEDLEK
KRANTSAYRNYLNREGPRALGSKEIPQGAENCLEGCAFVLTGVLESLERDDAKSLIERYG
GKVTGNVSRKTTYLVLGRDSGASKTEKAESLGTKIITEDELLDLIRTKPGKKSKYEIAAE
AECKSAKTRTPNSKGKSTPLAKKASPQGRSPNKRSPLVGKSKPGSASTSGSPGASRLSSD
VKKSLSFDQTKTISTPDNDGSSLLWVDKYRPHSLKNLIGQQGDQSCANKLLRWLQNWHKI
HSGNAKAPAAKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCT
RSKNSLKEVIAESLNNTSIKNFYTGASQTVSNKHVLIMDEVDGMAGNEDRGGIQEMIGLI
KQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAVMSIAFKEGLKIPPPALN
EVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADANNAKKDMKMGPFDVCRKVFASGEE
TAHMSLIDKSDLFFHDYSLAPLFVQENYIHVRPAAAGGNLKNHLVLLSKAADSICDGDLV
DKQIRSRQIWTLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIIQELAS
HMSLKTLSSKEAINLDYLPYLHSAILEPLQSQGAEGASQSVKLIDNYNIIKEDVDNMMEI
STWGRQPDPYSKLDSKVKAAFTRAYNKESHLTPYSLHVVKKSRKGAVDPELVGELDNESQ
FQEEEEEDGLTTDAMIKQKKAKPAKEPKQAKTGESGKGKGKGKGKGKNRD
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaggttttttgcgcccaccaaacctgcggctcccaaatcttcaaacgga
agcaccagcactgatgaagagccgaagaagaaacagaaatcaaaatcagtcaaaagtccc
aaatctgacgagaaacctactggaaaacgaaagaaaagagtcataattgattcagactct
gaggaagagaagaagagcaagaagagcactaaagagacagctgcccccacggagaagaaa
cacccagtgacttatgtgtctgattctgattccgatgaaacttttgtgactctgaaaaag
tcctccaaagccagagaaaatggaacagttaaaggcaagaaggcatcagactcgggcaaa
acaaaagaggtgaaaacatcctccagtaaatccccaaccaaatctccgaccacagctgtg
aagggagggacgaagagctctcagcccatcacatccccaaagacagcaccaaccccaccc
aaacagacacccacctcagtaatggactttttcgggagctcgagcgttcagagatcggac
aagaaaatggttgctagtaccagcatcaagaggaaggcagtaactcaggagtctgaagag
tcgctcagtgatgaagccattgcaagagaacttcagatggatgaagacatggagatggag
aagcagatccatgatgatggggaatttgcaagaactttagcgatgttcgatgaagctccc
ttggcgaaaaaggcccgtgtagacccggtttccccctcaaagagcagctctcaggcaaaa
actttagagaccaagcccaagctaatggacccatcccctaaaacaagccccatcaagact
agctccaaactggctcagatgaaaagacaacaagaacaaatgaatgaggaaaggaaaaaa
gtagtaaggggtgaaaagcagattaagatctctccaaagaaggagcccatttcatctaat
agctcagagcgggcagccacgcccaaatcaggaagatcttcaacacctaaaagtcacggt
gcacccattaaaacgtcaccaacaaaaccagagaatacaagtcctgaggatctagaaaag
aaacgggcaaatacatcagcgtaccgtaactacctgaacagagaaggaccacgagcacta
gggtctaaagagataccacagggagcagagaactgtctggaggggtgtgcctttgtgttg
actggtgtgttagagtctttggagagggatgatgcgaagtcactgatagagcgatacggc
gggaaagtcacaggaaacgtcagccgcaaaaccacttatcttgttctgggacgagacagc
ggagcctcaaagactgagaaggcagagagtttgggcactaagattattactgaagatgag
ttgttggatcttataagaaccaaaccaggcaaaaagtccaaatatgagattgcagcagag
gcagagtgtaaatcggctaaaacaaggaccccaaactctaaaggcaaatccactcctctg
gccaaaaaggcctcaccacaaggacgcagccccaacaagagaagccctttagtggggaag
tctaagcctggctctgcctctacctctggatcacctggagcttctcgattaagttcagac
gtcaaaaagagcttaagctttgatcagaccaagacaatatctaccccagacaatgacggg
agcagtctgttgtgggtggataagtaccggccccacagtctaaagaatctgattgggcag
caaggggatcagagttgtgccaataaacttctgcgttggttacaaaactggcataaaatt
cacagcggcaatgcaaaagcaccagcagctaagtttggtaagttcgggagtaaagatgat
ggatctggatttaaggcggcgttattatccgggcctcctggtgttgggaagaccactact
gctgctctcgtctgtgaggagttgggttacagctacgtggagatgaatgcgagctgcacc
cgcagtaagaacagtttaaaagaagtgattgcagaatcactcaacaacaccagcattaag
aacttctatactggtgcatctcagactgtgagcaataaacacgtccttataatggacgag
gtggacgggatggcaggaaatgaagacagaggaggaattcaggagatgatcggcctaata
aagcagtcaaagattcccatcatctgcatgtgtaatgaccgcaatcatcagaagatccgc
tcgttggccaactactgctacgacctgcgattccagagaccccgtgttgagcagatcaag
ggggctgtgatgtctatagctttcaaagagggtctgaagatcccacctccagccctgaat
gaagtcatcttggcatccaatcaggatattcgacaggtgctgcataatctgagcatgtgg
tctgctaaagacaaagtcatgacctatgaccaagccaaagctgatgctaacaatgctaag
aaggacatgaaaatgggtccgtttgatgtgtgtcggaaggtgtttgcctcgggagaggaa
actgctcacatgtctttgattgacaagtcagaccttttcttccacgactactcattagca
ccactgtttgtccaagagaactacatacatgtccgaccagccgcagcagggggaaatctg
aagaatcatttggtgttgttgagtaaagcagcagacagcatttgtgatggagatttagta
gacaaacagatccgctccagacagatctggactttgcttcccacacaggcgatctatgcg
agtgtgttgcctggggaactgatgcggggttatatgagtcagtttccaacctttcccagc
tggttgggcaaattctcatcagctggcaaacacagccgcatcatacaggagctcgcttca
cacatgagtctaaagacgttaagcagtaaggaagcaataaatctggattacctgccatat
ttgcattcagcaatattggagcctcttcagtcccaaggtgcagagggagccagtcagagt
gttaagcttattgacaattataacatcatcaaagaggatgttgataacatgatggagatc
agcacatggggcagacagccagatccttactctaaactagactccaaggtgaaagctgca
tttacacgagcatacaataaggagtcccatctaactccatactccttacacgtggtcaag
aaaagccgtaaaggtgccgttgaccctgagcttgttggagaacttgacaatgaatctcag
ttccaggaagaggaggaagaggatgggcttaccacagatgccatgatcaagcagaagaaa
gccaaaccggcaaaagagcccaagcaggcgaaaaccggggagtctgggaagggaaaaggc
aagggtaaaggaaaaggaaagaacagagactga
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