Myxocyprinus asiaticus (Chinese sucker): 127445363
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Entry
127445363 CDS
T08782
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like isoform X1
KO
K12597
protein AIR1/2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127445363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127445363
03016 Transfer RNA biogenesis [BR:
masi03016
]
127445363
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
127445363
Transfer RNA biogenesis [BR:
masi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
127445363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
127445363
NCBI-ProteinID:
XP_051561356
LinkDB
All DBs
Position
8:4209049..4281513
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AA seq
608 aa
AA seq
DB search
MKSTKRALLEMFSGYQERDDYEDELYRDEADSGLSDADSELEFRLYSQLHYCAEDHEDLT
EVQSARAQTQPQQNSLAPCPAPSDVIEIDSGPDAITVSDNTEEDDSVCAKKGQTSKHCSL
AHRKLQPYGIHSPGPAQARTGRSSPDDVVVLDSESDESSDSHSIPPFVEDVDSDSDELEN
WMILGREKQDGDQSIQLNLSIPDNCERQDYVPVRGKEQNWSVSEKDKRAQIYNKGVGPRR
LSNRYYTEKSVTCHNCNKIGHLSKNCPTPKKVPCCSLCGLRGHLARTCPNRHCSNCSLPG
HTYDDCLERAYWHKCCHRCGMTGHFIDECPEIWRQYHLTTTLGPICEASDPEACKTPSYC
YNCSKKGHFGYECSERRMYNGTYPTLPFVSYYDKIRDIKCRDHRIKKKAKELQEAGLILP
DGGIVSSTPQPPRKKQKTSHRQSPYTPTTHTNNSHTPKRRIAHTPKHHPQAHKQNTHLHF
KQDSKTPGTGGKYIPQSAFTPQEQGKNKNQRKKKKKNKIAAPLYIDEDADFPRGGQNGPH
TSGVRPSPQNANKKPDLLFGMRKNNTGNREKSKKKMRRLRNKQRKAAKDSAIYPSDENLF
LIKQKQRR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaactaaacgggctctccttgagatgttctcggggtatcaggagagggacgat
tatgaggatgagctgtaccgggatgaggccgactcgggtttgtctgatgctgacagcgag
ctggagttcaggctttattcacagctgcattactgtgctgaggaccatgaggacttgaca
gaggtccagtcagcaagagcacagactcaacctcagcagaattccttggctccttgtcct
gctccatctgatgtcattgagattgactctggcccagatgctatcacggtctcagacaac
acagaggaagatgacagcgtgtgtgctaagaaaggtcaaacatcaaagcactgtagcctg
gcacacaggaagttgcagccctatggcattcattcacccggtcccgcacaggctcgaact
ggaaggagttcccctgacgatgttgtggtgttggattctgagtcagacgagagctcggat
tcacactctatacctccttttgtggaggatgtggattcggactcggatgaattggagaac
tggatgattctgggccgagagaaacaggatggagatcagagcatccagctgaacctttcc
ataccggataactgtgagagacaggattatgtcccagttcgagggaaggaacagaattgg
tctgtttcagaaaaggataaacgggctcagatctataataaaggggttggcccgaggcgt
ctttcaaatcgttactacactgaaaaatctgtcacgtgtcacaactgcaacaagatcggc
cacctctccaaaaactgccccacaccaaagaaggtgccatgctgctcattatgtgggctt
cggggacacttggcgaggacctgtccgaaccgtcactgttcaaactgctcgctgcccggc
cacacctatgacgactgtctggagagagcttactggcacaaatgctgccaccgctgtggc
atgaccggacacttcattgacgagtgtccagaaatctggagacagtaccacctcacgacc
acgctgggacccatctgtgaggccagtgatccagaggcctgcaagaccccctcctactgt
tacaactgctcaaagaaaggacacttcggttatgaatgctctgagaggagaatgtataac
ggaacatatcccaccctgccctttgtttcctattatgacaagatacgtgacatcaagtgc
cgggaccatcgaattaaaaagaaggccaaagaactgcaggaagctggattgattttgcca
gatggaggcattgtttcatctacccctcaaccgcccaggaagaaacagaaaaccagccac
agacagtccccatatactcccaccactcacacaaacaactcacacacgccgaagagacgc
atcgctcacacgcccaaacaccatccacaagcacacaaacagaacacacacttgcatttc
aagcaggactcaaaaacaccggggactggtggcaaatacatccctcagagtgcattcaca
cctcaagagcaaggcaagaataaaaaccaaagaaaaaagaagaaaaagaacaaaattgct
gcacctttatatatagacgaagatgcagactttccaagaggtggccagaacggtcctcac
acttcaggggttcgcccatcacctcagaacgccaataaaaagccagatttgctctttgga
atgagaaagaacaatacagggaatagagagaaaagcaaaaaaaagatgaggagactcaga
aataagcaaagaaaagcagcaaaagattctgccatttatccatctgatgaaaaccttttt
ctgatcaaacaaaagcaaagaagataa
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