Myxocyprinus asiaticus (Chinese sucker): 127445396
Help
Entry
127445396 CDS
T08782
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
masi04990
]
127445396
Domain-containing proteins not elsewhere classified [BR:
masi04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
127445396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
127445396
NCBI-ProteinID:
XP_051561402
LinkDB
All DBs
Position
8:complement(5888072..5955787)
Genome browser
AA seq
1839 aa
AA seq
DB search
MASPGDDSASNAQLDQPESVETTPEPAFKEAQKWIEEVTGRSFGDKDFRSGLENGILLCE
LLSSIKPGLVKKINRLPTPIAGLDNLTMFLRGCEELGLKGSQLFDPGDLQDTSIRANLTD
SDCIRKLKNVLITIYWLGKAANSCATYNGPTLNLKEFEGLLSMMRKECVSEESDSPKRSI
RDSGYIDSWESERSDSLSPPRHGRDDSLDSLDSFGSRSQNTPSPDTVLRCNSDDFEGDHR
KLPDMRKDDMSARRVSYKEPRAALPFNQYLPNKSNQTNYLPAPLRKRRSVSNSTSPVGER
PLREEGLEVLKEGAVMSRSPALQKTFTWAGEKGVELDEAELKKMRKLEKAGIKVLPTSVQ
YNSPNVIAEELNKAKPSSPDIILRRDNDFLCAAAPHEWDSNEEDEDEEGERKVPDVQKDD
LASRRARMNQFKPSVTHHFLPGSCSWKDREKWEGIRLASQQAILERMENSEQEKSPADFT
SSEESVITRKDNAFLNPDKEREKEGDEEDEREVEGRIVIPNPHKDDLARRRAGRGTRPPK
DPHQSLVQTSITQSDLKTWERLKMNTESSEDGSTLAEVSIITRKDNPFLSPEKDSGSEEE
KEDGPVREGGGRVVMPNVKKDDLARRRVQSGPTPQRDPLQSLAQTTITQSDLEKWQSLKM
NTESSDEPIVPLCQTCLEKGCLSIASKAKVAKNDLAGCRERSSGKRRRFVTFGGVTEMEN
TSWQEEDEERGEGDKAEKLQYLLSMAPVAMPTIGLGSRLTKRAVGRDANPEPAVVMPPEP
PSPVIFDHKQPSTSAEEELDEREGEEEEEKQPDVEKDDMLARRTGVFQKPATGTSYNRFL
PQPGSKREGATGASLAQKGSIQMGTIGERDLQYLERNIKTKRTKIGQRNEPDDQLPPVPL
SVVTQKSPDIVRSTATNVGGSCSYISDDYDECGDEGPPPDFDKDDMLTRRTGAHQKPSGV
AGQTFNACLPKPGAVKLKSTPGSGLQQSYIKPKEQEKTPALDSFTLSSVAPPPRDAEDTP
RKGPQMTDRQEVGSVSVVGQESLIKNETNPKSPSPIPDQASRRPLWQEDDDLPPIFRATS
VSDETESASLIDMRDEEDEMAYLRPHSQSRNERLHNQYNKLKEEEDQWQDDLARWKNRRR
SASQDLIKKEEERKMMEKLMTTDGGSSHRKKSIKTYKEIVEEKERREQELHEQYCKASTP
EEKAAVLQRYALRFTISDAILEKLQLPKLPSAATPIHTSFRQPVKQPTCPGPVEPEVPEP
TQTNQTHHSVLADQQMVQNQTLVQPKSPEPLPTKTTKTPEISSAPTRAPPACSKPVPLIT
PKPYSQPRLSQGPCKTLKTDGLVRVNGESTQEERRESAVGVSLKHPVSFSSSPPKPATQT
QQNDELTVLETSHHQQSSQTSFQEKEVVKKEKECSLSIQEENSKEETSATLQLEPGKPMV
KRHCLVTTTIVTELTQTYPVQPNDTSSTDQLCGSVQKLCDLSTSNESSKADQTSYSLSLT
ESSPTSKSSRLRWEFFAPTEGIDYSIECIETPMLNLAKRVDHWTWDPNEERRRQERWQQE
QERLLQEKYQREQEKLKEEWERAQREVEEEERRHLEEERRILEETVTPLTPCSAVLSSRR
ITEPPCLSQPPHDTIVLSLADWERKQEILERQAETNQSNGLTHSTDEVITAAQQNSQRTE
PQESQTATPQLQFTEDGSWNCKSKSRQEDLKKTASLDRKQSPPQSQTAGMRRTGSCENVL
GTQSSKSPSPSQDTSPPSPSRSVSGKKLCSSCAHPLGKGAAMIIETLGLYFHIQCFKCGI
CKGLLGDVSAGTDVRIRNGLLNCQECYIKSQAAGQPTTL
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcctggagacgattcggcttcaaatgctcagctggatcagcccgaatctgtg
gaaacaacccctgaaccagcgttcaaagaagcacagaaatggatcgaggaagtaacagga
agaagtttcggtgataaggatttcagaagtggactggagaacggcattctgctctgcgag
ttgctgagttcaatcaaaccaggccttgtgaaaaagatcaacagacttccaacacccatt
gcgggactagataatctgaccatgtttctgagaggatgtgaagagctgggactgaaggga
tcacagctgtttgatcctggagacctgcaagatacgtcaatacgagcaaatttaacggat
tctgactgcattagaaagttgaagaatgtactcataactatatactggcttggtaaagct
gctaacagttgtgcaacgtataacggccccacactcaacctgaaagagtttgagggacta
ctttccatgatgcgaaaggagtgtgtaagtgaagagtcagactcccctaagcgcagtata
agggacagtggttacatagacagctgggaatcggagcgctctgattcgctgtctccaccg
aggcacggccgtgatgattcgttggacagtctcgactcatttggctcgcgatcacagaac
acaccctccccagacactgttcttcgctgcaacagcgatgactttgaaggtgatcacaga
aagttgccagacatgcgtaaggatgacatgtctgctcgacgcgtgtcctacaaagagcct
cgtgctgctcttcccttcaaccagtatctgcccaacaagagcaaccagaccaactacctt
cctgcccccttgaggaagaggaggagtgtgagcaactcaacatctcctgttggtgaaaga
cctctcagagaggagggtctagaagttttaaaagagggggctgtcatgtctcgaagccct
gcgcttcagaaaacgttcacttgggcaggtgagaaaggggtggagcttgacgaggcggag
ctcaaaaaaatgaggaagctggaaaaggcggggattaaagtattacctacctctgtgcaa
tacaatagtccaaacgtcattgctgaggagctcaataaagctaaaccatcttcccctgac
atcatacttcggcgtgataatgactttctgtgtgccgccgccccgcacgagtgggactcg
aatgaggaagatgaggacgaagagggtgagaggaaggttccagatgtccaaaaggatgat
cttgcttctcgcagagcccgcatgaatcaattcaaacccagtgtgacgcatcactttctg
ccgggctcttgtagctggaaggaccgagagaaatgggagggaatcaggctggcatcccag
caagccatactggagaggatggagaattcggaacaggagaaaagtccggctgacttcacc
tcctctgaggaatcagttataactcgaaaggacaatgctttcctaaaccctgacaaagaa
agggaaaaagagggggatgaggaagatgagagagaggtagaggggaggatagttatccca
aacccacacaaagatgatctagcgaggaggcgggctgggcgagggacacgccctcccaaa
gatcctcatcaatcattggtccagacttccatcactcagtctgacctgaagacatgggag
agactcaagatgaatacagagagcagtgaggatggctccactcttgctgaagtgtcaatc
ataactcgcaaagacaaccctttcctgagccctgagaaagacagtgggagtgaggaagag
aaggaggacgggccagtcagagagggagggggtagggtggtgatgcctaacgtaaagaaa
gatgacctggccagaaggcgggtccaaagtgggcccaccccacagagagatcctctgcag
tcattggctcaaactaccatcactcagtcagacctggagaagtggcaaagtctcaagatg
aatacagagagcagcgatgagcccattgtccctctgtgtcagacgtgtcttgagaaaggc
tgcctctcaatcgcctccaaggcaaaggttgccaagaatgacctagccggttgccgggaa
cgttcctccggcaaacggcggcgttttgtgacatttgggggtgtgacagagatggagaac
acatcctggcaagaggaggatgaggaaaggggagagggggacaaggcagagaagcttcaa
tacctcctctcgatggcacctgttgccatgcccaccatagggctgggctccagactgaca
aagagagcagtcggcagagatgcaaacccagaacctgctgtagtcatgccccccgaaccc
ccaagccctgtcatatttgaccataaacagccttcgacctctgcggaggaggagctggat
gagagagaaggtgaggaagaagaggagaagcaaccagatgtagaaaaagatgacatgctg
gctcgtagaacaggagtatttcagaagccagcaacagggacgtcatataaccgattcctc
ccacagccaggatccaagagagagggtgctacaggggcttcattagcccagaaaggaagt
attcagatgggcacaattggagagagagacctccagtacctggaaagaaatataaagaca
aagagaaccaagattggacagagaaatgaaccagatgaccaactaccaccagttccgctc
tccgtagttacccaaaagagtcctgacatcgtacgctcaactgctaccaatgttggtggc
tcttgcagttacattagtgatgattatgatgagtgtggggatgaaggcccaccgccagac
tttgacaaggatgacatgctcactcgaaggactggagctcaccaaaagccaagtggggtg
gcaggacagacttttaatgcatgtttgcctaaacctggtgctgtcaaactcaaaagcacc
cctggcagtggattgcagcagtcatacatcaagcctaaagagcaagagaaaaccccggct
ttggacagcttcacccttagctctgtggccccgcccccaagagatgctgaggacacgcct
aggaagggccctcagatgacagacaggcaggaggtgggctctgtgagtgtggtgggtcag
gaaagtcttattaaaaatgagactaatcccaaaagcccctcccccatacctgaccaagcc
tcacgtcggcccctttggcaggaagatgatgatctccccccaatattcagagcaactagt
gtttctgatgaaacagagagtgcgagtttgattgacatgcgtgatgaagaggacgagatg
gcctaccttcgaccacacagccaatcacgaaatgagcgcctacacaatcagtacaacaag
ctcaaagaggaggaggaccagtggcaagatgatttggctcgctggaagaatcggaggcga
agtgcctctcaggatctgatcaaaaaagaggaagaaaggaagatgatggagaagttgatg
acaacagatggaggatccagccatcgcaagaagagcatcaaaacatacaaagagatcgta
gaggagaaagagcgtagagaacaggagctacatgaacagtactgcaaggcctccactcca
gaggagaaagcagccgtgcttcaacgctacgctctccgtttcaccatcagcgacgccata
ctggagaagctccagctccccaaactgccttctgctgccacgcccatacacacttctttc
cgccagccagtgaagcagcccacatgtcctggcccagtagaaccagaggttccagagcct
acacaaaccaaccaaacacaccacagtgtccttgcagaccagcagatggtacaaaatcag
acactggtacagcctaaaagccctgaaccattacctacaaagaccaccaaaactccagaa
atctcatcggcacccacacgtgctccccctgcttgttcaaagcctgttcccctaatcacc
ccaaaaccctacagccagcccagattaagccagggcccctgcaaaacattgaagactgat
gggctggtgcgtgtgaatggagagagcactcaagaggagagaagagagagtgcagttgga
gtgtctctaaagcatcctgtctccttctcttcctcacccccaaagccagccactcagact
caacaaaatgatgagctaactgtgttagaaacttcacaccaccagcaaagctcgcagact
tcctttcaggagaaagaggtcgtaaagaaagaaaaagaatgttctctaagcattcaggaa
gagaatagcaaagaagagacctcagctacactacagttagaaccaggtaaaccgatggtg
aagcgccactgtcttgtcacaacaactattgtgacagaactcactcagacataccccgtc
caaccaaatgacacatctagcactgaccagctttgtggctcagtccagaagttatgtgat
ctgagcacatctaacgagtccagcaaggctgaccagacttcatactcactctcactgaca
gagtcctcacccacctctaaaagctctaggttacgctgggagttctttgctccaacagag
gggattgactactccattgaatgtattgaaaccccaatgttgaaccttgcgaaaagggtt
gaccactggacgtgggatcctaatgaagaacgcaggcggcaggagagatggcaacaagag
caggaacgcctgctgcaggagaaatatcagagagagcaggagaagttgaaggaggagtgg
gagagagcacagagagaagtggaagaggaggagagaagacaccttgaagaggagaggcga
attctggaggaaaccgtgaccccactgaccccttgctccgcagttttgtcatccagaaga
attacagagcccccctgcctcagccagcctccacatgacaccattgtcctctcattggct
gattgggaaaggaaacaggaaatactggagagacaggcagagacgaaccagagcaatgga
ctgacacacagcactgatgaagtaatcacagctgctcaacaaaacagtcagagaactgaa
cctcaggagagccaaacagctacaccacaactgcagtttactgaggatggctcatggaac
tgtaagtctaaaagcagacaagaggatttgaagaaaactgcctcactggaccgtaaacag
agtccaccccagagccagaccgcaggaatgaggaggactgggtcgtgtgaaaatgtatta
ggaacacaatcatcaaaatcaccttcaccatcacaagacacgtcgcctccatcccccagc
aggtcggtaagtggaaagaagctctgctctagttgtgcgcatccattgggcaaaggagca
gctatgatcattgaaaccctggggctgtactttcatattcagtgttttaagtgtggcata
tgtaaagggttacttggcgacgtaagtgcaggaactgacgtcagaattcgaaacggactc
cttaattgtcaagaatgctacataaaatcacaggctgctggccagccaacaacattgtga
DBGET
integrated database retrieval system
