Myxocyprinus asiaticus (Chinese sucker): 127445509
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Entry
127445509 CDS
T08782
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127445509
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
masi04990
]
127445509
Domain-containing proteins not elsewhere classified [BR:
masi04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
127445509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127445509
NCBI-ProteinID:
XP_051561599
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All DBs
Position
8:4289060..4304771
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AA seq
649 aa
AA seq
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MARGMQKPTWSRQQWRLIQRFYQMTLLLSLLFPTTKPVPWYNDFSSSPGEGCEGFQMDVC
GVCAGDGSSCELFSGTLFLSLLSVGYHKILDIPIGAQRIKLQETQKTRNYLALRTATGKA
VINGDWVIDRPGQFYSAGTEFTYKRPNEIRSRTGESITAPGPTNQELHLFVLYQQPSPTV
FYEYILPRDPTIITHSDTYSVSSVLPHVESHGLFAGHEISNTKNSTGDLHPNQVPLDPMT
SEPLPLYSWVAMTETPCSVTCGTGIRQVLYSCIERATQTTVPGDLCSHTHHPGPQVEDCQ
SLPCPAFWDVGEWSECSKTCGPGFQYRQVICRQTQGHHVNSTVIVATSLCDNTEMLETTT
VCQLKICSEWQIRSEWTECSVPCGVGQRSREVVCMDNLGDVVSDEECNMALRPQDLQNCD
KGVCASSWFFSLWSDRCSADCAEGSRSRSVVCMMSQTNSLPLDNCKDKEKPDELTPCDLG
PCTDQLEWYTGPWGQCSSECGNGTQSRGVVCVLQSNGQLEVNSDDTCSHLPRPTNTQTCH
LKSCGAQWYMTAWSSCSRSCEGGFRVREVRCLRDDQTISNDCDLAIEPVRQEECNTHTCM
PHIDESCKDMYYNCVVVVQSRLCVYSYYRTTCCASCSRVIHRDTLGRIR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgggatgcaaaagccaacctggagcagacaacaatggagacttatccaacgt
ttctatcagatgaccctcttgctctcccttctgttcccaaccactaagcctgttccctgg
tacaatgacttcagcagcagccctggagagggctgtgagggtttccagatggatgtatgc
ggtgtgtgtgcaggagatgggagctcatgtgagctgttcagtgggaccctctttctttct
ttgctctctgttggctaccacaagatcctggacatccccattggagctcaaagaataaaa
ctacaggaaacacagaagacacggaactatttagctctcaggacagcaactggtaaagcc
gtgataaatggtgactgggtgattgacaggccaggacagttctactctgcaggtactgaa
ttcacatacaaacggcccaatgagatccgcagcagaacaggggaatccatcactgcccct
ggtccaaccaatcaggagcttcatttgtttgtcttatatcaacagcccagtccaactgtg
ttttatgagtacattctacccagagaccccacaatcatcacacattcagatacatattct
gtctctagtgtacttccccatgtagaaagccatgggctgtttgctggccatgagattagt
aacactaaaaactcaactggcgaccttcaccctaaccaagttccattggaccctatgaca
tctgagccccttcctctgtacagttgggtggccatgacagaaactccctgcagtgttaca
tgtggaacaggcattcgtcaggttctgtacagctgtatagaaagggccactcaaactact
gtaccaggggatctctgcagccatacacaccatcccggcccccaggtagaagactgtcaa
tcgctgccttgcccagccttctgggatgttggggagtggtctgagtgcagtaaaacctgt
ggtccaggtttccagtatcgtcaggtgatttgccggcagacgcagggacaccatgtcaat
agcacagtcatcgtggcgaccagcctctgtgataacacagagatgctagagacgaccacc
gtgtgccagctgaagatctgcagtgagtggcagattcgctcggagtggacagagtgctca
gtgccatgtggagtaggtcagcgcagtagagaagttgtgtgtatggataacctgggtgat
gttgtttctgatgaggaatgcaacatggcccttcgcccacaggacctgcagaactgtgac
aaaggagtgtgtgccagcagctggttcttctctctctggagtgataggtgctctgcagac
tgtgcagaaggtagtcgcagtaggtcagtagtgtgtatgatgagtcagaccaactctctg
ccactggataactgtaaagataaggagaaaccagacgagctcacgccgtgtgacctggga
ccctgcacagatcaactggaatggtacacaggaccatggggacagtgctcatctgaatgt
ggcaatggaactcagagtcggggtgtggtgtgtgttctccaaagcaatggccagttagaa
gtcaactcagatgatacatgctctcatctgccccgccctacaaatacacagacctgccat
ttgaaaagctgtggtgcacagtggtacatgacagcttggagctcatgttctcgatcttgt
gagggaggctttcgagtgagggaggtacgttgcttgcgagatgaccagaccattagtaat
gactgtgaccttgccattgaacccgtcagacaagaggagtgtaatacacacacctgcatg
ccacatattgatgaatcctgcaaggacatgtattataactgtgtggtggtggtccagtcc
cgtttatgtgtgtactcgtactatcgcaccacatgttgtgcatcatgctctcgggtcatt
catagagacacgctcggtagaatcaggtga
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