Myxocyprinus asiaticus (Chinese sucker): 127445679
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Entry
127445679 CDS
T08782
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127445679
00535 Proteoglycans [BR:
masi00535
]
127445679
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127445679
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127445679
Proteoglycans [BR:
masi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
127445679
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127445679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF959
DUF1554
DIP2116-like_N
Motif
Other DBs
NCBI-GeneID:
127445679
NCBI-ProteinID:
XP_051561864
LinkDB
All DBs
Position
9:36234359..36395866
Genome browser
AA seq
1385 aa
AA seq
DB search
MGHRQGTYFLLILYVAPLNVWRGNSPVVTDASAVDKDGSDIGQTSKDKNIAGVGTEIIDV
ASGIREFVQNWDQNVTVQWNNTVTERTHNISKKIGRSKTEESGVSLLQLFGNPPPENITL
VAGPNGQTAYLFQKDSNTGQMARAHLPSPLYRDFSLIFHLKSTSEDAGVIFSITDSNQEI
MFVGVKLSAVEDGKRDVLFYYTEPDSDESREVASFKVPHQPDKWNRFSLAVNLDKVSFYE
DCDSEPKVVKFERSSNDIELGTNSGIFVGRGGAVDPEKFQGMISDLRVVGNPWAAERHCD
EADDDDDDDDYDGSGDNGSGILDRTEMGHNVEVLHTLLPPPVSTGVSSPKGDKCVRGEKG
DQGGQILKGPKADSVALETSALISSTGGIHEEKGSTGFGYPGPKGDRGPPGPPGPPGPQG
PLTELIDTGDRMVQKVPGPMGPVGPPGREGPPGTPGPEGKTGDPGEDSKLGPEGPRGFPG
APGAIGPKGQKGQKGDGQPGPRGPPGPPGPPGPSVSDRTTFVDMEGSGLLLGVRGPPGPP
GPPGSPGPSGDSGLGSTGAGPTVENGTSGHPGPPGRPGIPGAPGPPGPPGQKGAQGSSGM
SGQEGLAGLPGPRGPQGPPGPPGPPGPAFRITTDGKEKEVPLQYIPGIMGQPGPQGPQGI
PGLPGKAGFPGIPGQKGNEGSRGGEGIPGLDGFPGRIGLKGERGWKGDKGEPGHKQGPPG
PPGPPGSLMYINGSKDGGYGIPGPQGPPGIAGQAGFPGPMGPKGDLGAPGLPGDSIKGQK
GEPGLILLDSSGNPIGGLAEQLDDSGPPGPEGPVGPVGPPGPKGEIGLPGRPGRPGLNGK
KGEKGDSGFAGGNGYGYQGPPGPPGPPGPPGPPVSVDRLNGYYDSLRFPYAIKGDKGERG
SPGIPGLPGLTTNFDIYALKNEIKGEQGPKGEKGEPGGGYHSAPHGAGQGPTGRPGPPGP
RGESIRGPPGPPGPPGAPGIGYAGRPGNPGPPGPPGPPGSVLPGSYRPSQTISFPGPPGP
PGPPGQSSGVIVLRSFGTIASATRKQPEGTLVYVMDNRDVYMRVQDGIRQLMLGEYTPFP
MDLDNQVAAVESPPEVHNSQDYPTASPSQAPLQLEAQYPVPPDPRHQPSYDSRYHGQTDP
RYLFPTYPRHSDSRYSPSEDTIYQGYADPKHHFQSSHPDQSGYPDSRYPSIPFQRPTIQE
TKPLAHTHTSGPVLHLIALNSPQEGDMRGIRGVDHQCFSQAQAIGLKGTFRAFLSSRLQD
LYSIVRKNDRDRLPIVNLKDEELFSDWEFIFSESEGKMRDNARIYSFNGQDVLNNDAWPE
KMVWHGSSTRGHRQTDSYCETWRTGSHAVTGMASSLQDGYLLQQSPRGCTSSFIVLCIEN
SYIAK
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaggcagggcacatacttcctgttgattctatatgtggctcctcttaatgtc
tggcgggggaacagtccagttgtcacggatgcctcagcggtggacaaagatggttctgac
attggacagaccagtaaagacaagaacattgctggtgttgggacagaaatcattgatgta
gccagtgggatccgggaatttgtgcaaaactgggaccagaacgtgactgtgcagtggaat
aacactgtcacagagaggacacataacatctctaagaagattggccgttccaagacggag
gagagtggagtctctctgttgcaactttttggaaaccctccacctgaaaatatcacactt
gtggcaggcccaaatggccaaactgcatacctctttcaaaaggacagtaacacaggtcag
atggcacgtgctcacctgcccagccccctctaccgagacttctctctcatcttccatttg
aagtcaacctctgaagatgctggggtgatcttctccatcaccgattccaatcaagagatc
atgtttgttggcgtcaagctctcagctgtggaggatggcaaaagggatgtccttttttat
tacacagagccagattcagatgaatctcgagaggtggccagctttaaagtgccacaccag
cctgataagtggaaccgtttctctctggctgtgaacctagacaaggtgtctttttatgag
gactgcgattctgagcccaaggtggtgaagtttgagcgctcatccaatgacatagagctg
ggaacaaactctgggatctttgtgggacgaggtggagctgttgacccagaaaaatttcag
ggcatgatctcagatttaagggtggttggaaacccatgggctgcagagcgtcattgtgat
gaggctgacgacgatgatgatgatgatgactatgacggctctggggataatgggagtgga
atattggacagaaccgagatgggacataatgtagaagttctgcataccctgctgccacca
cctgtttctacaggtgtctctagtcctaaaggagataaatgtgtgaggggagagaagggg
gaccaaggtggccagatcctcaaaggtccaaaggccgactcggtggctcttgagacttca
gccttgatctctagcacaggtggaatccatgaagagaagggtagtactgggtttggatat
cctggccccaaaggagatcgtggccctccaggaccgcctgggccacctggtccccagggt
ccattaacggaattgatagacactggtgatagaatggtgcagaaggtgccaggtccaatg
ggcccagttgggccaccaggtcgagagggcccacccggtacccctggtccagaggggaaa
acaggtgatccaggagaggacagtaaacttggacctgaaggacctcgtggttttccagga
gcaccaggtgcaataggacctaaagggcagaagggacagaaaggggatggacagcctggc
ccaagaggcccacctgggccgcctggacctcctggaccctcagtctcagacaggactacc
tttgtggatatggaaggttctggattgttgttgggagttcgtggacctcctggtccacct
ggtccacctgggtccccaggacccagtggagattcaggattaggttctactggagctggc
cccactgtagaaaatgggacctctggccatcctggtcccccaggtcgacctggaattcct
ggtgctcctgggccccctggaccccctggccaaaagggtgcacagggttcttcggggatg
tcagggcaggaagggctggctggactccctggtcccagaggacctcagggacccccagga
cctcctggaccccctggacctgccttcagaatcactactgacggaaaagaaaaagaagtt
cctcttcagtacattccaggcatcatggggcaaccaggtccacagggacctcaggggata
cctggactaccgggtaaagctggtttccctggtattccaggccagaaaggcaatgaaggg
tcaagagggggagagggaatcccaggtttagatggcttccctggaagaatagggctaaaa
ggggaaagaggatggaaaggtgacaaaggtgagcctggtcataaacaagggcctccaggg
ccacctggtcctcctggatcacttatgtatattaatggcagtaaggatggagggtatgga
atccctggaccacagggtccacctggtatagctggacaggcaggattccctggaccaatg
ggaccaaaaggtgatcttggggcaccaggactaccaggagactctatcaagggtcagaaa
ggtgagcctggattgattcttcttgactccagtggtaaccccattggtggactagctgaa
cagttggatgattcaggacctccaggaccagagggacctgtgggaccagttggcccacct
ggaccaaaaggtgaaataggacttccgggtagaccaggtcgacctggcttgaatggtaaa
aaaggggagaaaggtgattcaggctttgctggaggaaacggttatggctaccaaggcccc
cctggcccacctggaccacccggacctcctggaccccctgtttctgtggacagacttaat
ggttattatgacagtttaaggtttccctatgctataaaaggagacaagggggagagagga
tcgccaggcatccctggcttgccaggtctcactaccaactttgacatttatgcattaaag
aatgagattaaaggggagcaaggtcctaaaggagagaagggagaaccgggaggaggttat
cacagtgctcctcatggtgcaggacagggcccaactggaagacctggaccaccgggtcca
agaggagagtctataaggggacctccaggtccccctggacctcctggagccccaggaatc
ggttatgccggtcgtccaggtaatcctggcccaccaggtccacctggacccccaggatca
gtgctgccaggttcatatagaccctcacaaaccatcagttttcctgggccacctggtcct
cctggaccccctggacagtcatctggggttattgttttgaggtcttttggcaccattgct
tctgcaactcggaagcaaccagaaggcacgctggtctatgtaatggacaatagagatgta
tacatgagagtacaggatggcatcagacaactcatgctaggagaatacaccccttttcct
atggatctggacaaccaggtggcagcagtggagtctcctccagaggttcacaactctcag
gactaccctacagcctctccttcccaggcccctcttcaactagaagcccagtacccagtg
ccacctgaccctagacaccagccatcgtatgactcacgataccatggccagacagatcca
cgctacttatttccaacttatcccagacactctgattcacgatactctccatcagaagac
acaatctaccagggctatgctgatcccaaacatcactttcagagcagccacccagatcag
tctggttatcctgacagcagatatccaagtataccatttcaaagacctaccattcaagag
actaagcctctagcccacacccatacatcaggccctgtgctgcacctgatcgccctcaac
tcacctcaagagggcgacatgcgaggtattagaggtgtagaccaccagtgcttctcacag
gcccaagccattgggcttaaaggaactttcagggctttcctatcatcacggttacaggat
ctgtacagtattgttcgaaagaatgacagagatcggcttcctatagtaaatcttaaagat
gaagaattattcagtgactgggagttcatctttagtgaatctgagggtaaaatgagagat
aatgcacgcatctattcgtttaatggtcaagatgttctcaacaatgatgcctggccagag
aagatggtatggcacggatcaagcactcgtggtcacaggcagacagacagctactgtgag
acgtggcgaacaggtagtcatgctgtcactggcatggcttcttctctccaagatggctac
ttgcttcagcagtcacctcgtggctgcaccagctcttttatcgtactatgcattgaaaac
agttacattgctaaatga
DBGET
integrated database retrieval system
