Myxocyprinus asiaticus (Chinese sucker): 127445771
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Entry
127445771 CDS
T08782
Name
(RefSeq) DEAD-box helicase 3 X-linked b isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127445771
03041 Spliceosome [BR:
masi03041
]
127445771
03036 Chromosome and associated proteins [BR:
masi03036
]
127445771
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127445771
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127445771
mRNA cycle factors
Common to processing body (P body) and stress granule
127445771
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127445771
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127445771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127445771
NCBI-ProteinID:
XP_051562050
LinkDB
All DBs
Position
9:complement(185251..197111)
Genome browser
AA seq
716 aa
AA seq
DB search
MSHVAVGLDQQLAVLDLNSADVQGVPGRRYIPPHLRNKEASKNDSPGGWDNGSSNGFVNG
YHDGRDNRMNGGNSFGGRGPMRNDRGGRGGFRGITSGPYNPIQPMQNAGFGYDNKDGGGW
NAPKDNAYNSFGGRSDRGKSSFNDRGSSSRGRYERGGFGGGGNSRWVEDSRDEDWSKPLP
PNERLEHELFSGSNTGINFEKYDDIPVEATGNNCPHHIESFHDLEMGEIIMGNINLTRYT
RPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEALQAVKNSAQEN
GKYGRRKQYPISLVLAPTRELALQIYDEARKFAYRSHVRPCVVYGGADIGQQIRDLERGC
HLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQ
TMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNA
TVIPNEVQDNTGENVEKPGKESLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDR
EEALHQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSSRGRAKRFSGAFGARDY
RQTSNNTSSGGFGNRGGRSAGGHGGNRGFGGGGFGNFGYNSDGYGGNYSQVDWWGN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcggtctagatcagcagctcgctgtcttagacttaaactccgct
gatgttcaaggggtccctggaagacgttacattccacctcatttaaggaacaaagaagct
tccaaaaatgattctcctggcggttgggataatggaagtagcaatggctttgtgaatggc
taccatgatggccgtgacaaccgcatgaatgggggcaacagttttggtggccgtggtcct
atgcgcaatgaccgtggtggaagaggagggttcaggggcataaccagtggcccctacaac
cccatacagccaatgcagaatgcagggtttggctatgacaacaaagatggaggtggatgg
aatgccccaaaagacaatgcctacaacagctttggtggacgctctgacaggggcaaatct
tctttcaatgaccgagggtcttcctccaggggacggtatgagcgtggaggttttggtgga
ggtggaaacagccgatgggtggaggactccagagatgaagactggtccaaaccattgccc
cccaacgaacgccttgaacatgagctgttctctggaagcaacacagggattaactttgag
aaatatgacgacattcctgttgaagccacgggcaacaattgtcctcaccatattgaaagt
ttccatgatttagagatgggagagatcattatgggtaatataaacctgacccgctacacg
cgcccaactccagtccagaagcacgccattccaatcatcaagtcaaagagggacctgatg
gcgtgcgcgcagacaggttctggtaagactgcagccttcctgcttccagtgttgagtcag
atctacaccgatggaccaggagaagccctacaggctgtaaagaacagtgcccaggaaaat
gggaaatatggccgccgtaagcagtatcccatttcactggttctagccccaacaagggaa
ctggctcttcagatctacgatgaggcccggaagtttgcttaccgctctcatgttcggccc
tgtgtggtgtatggaggagctgatatcgggcagcagattcgtgatctggaaagaggctgt
catctgctggtggccacaccaggtcgtctggtggacatgatggagagaggcaagattggc
ttggactactgcaattacttggtgctggatgaagctgacaggatgttggatatgggtttt
gagccacagatccgccgtattgtggagcaggacaccatgcctcctaaaggtctgcgtcag
accatgatgttcagtgccaccttccctaaggagatccagatcttggctcgtgacttcctg
gaggagtacatcttcctggctgtgggcagagttggttccacctctgagaatatcacccag
aaggtggtgtgggttgaggaaaatgacaagaggtccttcttgctcgacctactcaatgcc
acagtcattccgaatgaggttcaggacaatacgggggagaacgtagaaaaacctggtaaa
gaatctctgacattagtgtttgttgagaccaagaagggagctgatgctcttgaggacttc
ctgtaccgtgaaggctatgcctgcactagtatccatggtgaccgttcccagagagaccgc
gaggaagcgctccaccagttccgctctgggaaatgccctatcttagttgccactgctgtg
gctgctcgtggtctggacatctccaatgtaaaacatgtcattaatttcgacctgcctagt
gacattgaagaatatgttcatcgtattggacgtactggtcgtgtaggcaaccttggtctt
gccacatcattctttaatgataagaatggcaacatcaccaaggacctgttggacatcttg
gtggaggccaagcaggaggtaccatcttggctggagagcctggcctatgagcaccaacac
aagagcagcagccgtggacgtgccaagaggttctctggtgcttttggtgccagggactac
cgtcagaccagcaacaacaccagcagtggaggcttcggaaatcgtggtggccgtagcgca
gggggccatggtggaaaccgtggatttggtggcggtggctttggcaactttggctacaac
agtgatggctatggtggaaactactctcaggtggactggtggggaaactga
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