Myxocyprinus asiaticus (Chinese sucker): 127446040
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Entry
127446040 CDS
T08782
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127446040
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
masi01009
]
127446040
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127446040
Protein phosphatases and associated proteins [BR:
masi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127446040
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127446040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
Cadherin_4
Herpes_glycop
EphA2_TM
V_ATPase_I
DUF6377
Motif
Other DBs
NCBI-GeneID:
127446040
NCBI-ProteinID:
XP_051562616
LinkDB
All DBs
Position
9:complement(46850255..47268756)
Genome browser
AA seq
1238 aa
AA seq
DB search
MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSAIGASS
NLVYRLVSKAGDNPLLRVMSNTGEIFTTANRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
LNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKENQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGTQVSQATRR
LFALNSTTGLITVQRPLDREESAIHKLTVQASDGSSSPARATITINVTDVNDNAPNIDLR
YIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NRGLFRIDPVTGNITLEEKPTVADIGLHRLVVNISDLGYPKSLHTLILVFLFVNDTVGNS
SYIHDLIRRTMETPLDRNIGESSETYQNVDNLKTIIAIVTGAMVVIVVIFIMVLVRCRHA
SQFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPVDPAHEPIN
GTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQGTLTRART
ELNPDYLDLRSRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGPLL
SHPLPLVQAQDEFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPSLMSYPSPKSPVSSFNNQKEWGKERLLNGHTLTRSWKSERGSQEQFGDRKTFGS
SEGHFGSGGGGHMADIPLASLKSYQPASGPDSPKEQQL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttttggttagatcca
accatagcccaagagctcatttaccctattcgtgaagagctacaggagaatgttcttatt
ggaaacataccaaaagacttgaacatctcccatatgaactctgctatcggggctagcagt
aatttggtttaccgacttgtgtcgaaagccggggacaacccgttattaagagtgatgagc
aatacaggagaaatctttaccaccgcaaaccgtattgacagggagaaactctgtcctggc
ccctcttttgaagacagtgagtgttcctttgaaattgaggtggtcattttgcctaatgac
tatttcagattaatcaaaataaagatcattgtcaaagacaccaatgacaatgcccctatg
ttcccctcccctgtgatcaatatttcaattccggaaaacacactaattaacagccgcttt
gccattccttctgccaccgatccagataccggacccaacagcgtacacaaatacgagctg
ttgaacgggcagagtgcttttggtttggatattgtggagacgccagagggtgagaaatgg
ccacagcttatagttcaacagaatttagacagagagcagaaagatacgtatgtgatgaaa
gtcaaagtggaagatggggggaacccacaaaaatccagcactgccattctacaggtgacc
gtcactgatgttaatgataaccggcctgtcttcaaagagaaccaaattgaggtccacatc
ccagaaaattctcctgttggaacgtcagtagttcagttgcaagccactgatgcagatgtt
ggggccaacgcagaaattaaatacatgtttgggactcaagtgtctcaagccacgcggaga
ctttttgctctgaactccaccactgggcttataacagttcaacggccgctagatagagag
gagtctgccattcataaactgacagtacaagccagcgatggaagctctagtccagcaaga
gccacaataactatcaatgtgactgatgttaatgacaatgccccaaatatcgatctaaga
tacatcataagtccaaccaatggtaccgtgatgctttctgaaaaagatccaattaacacc
aagattgctcttattactgtatctgacaaagacactgatgtcaatggcaaagttatttgt
tttattgaaaaagatgttccttttcacctcaaagcagtttatgataaccagtatttgtta
gaaacatctgcattgctcgattatgagggaacaaaggagtacatctttaagattgtggcc
tctgactctggaaaacctagtttgaaccagactgccctggtcagagtaaggctggaggat
gagaatgacaatccgcccattttcactcagcctgtcatcgaactggcagtcatggaaaac
aaccaacgtgacatgttcctgacaaccatcagtgctacagatgaggacagtggaaggaat
gctgagattgtctaccagcttggacccaatgcttcgttctttgatctcgaccgcaaaaca
ggggtgctaaccgcatcaagggtgtttgatagggaggaacaagagcggtttctctttaca
gtcaccgccagagacaatggcactagggctctgcaaagtcaagcggcagtcattgtgacc
atattagacgaaaacgacaatagccctaaattcacacacaaccactttcagttctttgtg
tctgagaatctgcctaaatatagcacagtaggagtgattactgtcacagatgctgatgct
ggcgagaatgcagtggtgaggctttcgatcctcaacgataatgagaacttcatccttgat
ccagattctggagtgataaagtccaatgtttcctttgaccgagaacagcaaagctcctac
acgtttgacgtaagagcggtggacaatggaagtcctccgtgttcatcagctgctaaggtg
accatcaatgtcattgatgtcaatgataacacccccattgtcatctacccaccatcaaac
acctctttcaaactagtgccactgtctgcaattccagggtcggttgtcgctgaggttttt
gcagtagatggtgacacaggtatgaatgcagaacttaagtacacaattgtgagtggcaac
aacagaggtcttttcagaattgaccctgtaacgggaaacatcacactagaggagaaaccc
actgttgcagacattggcctccataggttagtggtcaacatcagtgaccttggctatcca
aagtccctgcacaccctcatcctcgttttccttttcgtcaacgacacagttggaaattcc
tcatacattcatgacctcatccgtcggacaatggaaactccgcttgataggaacatcggt
gagagcagtgagacttatcagaacgtcgacaacctaaaaaccataatcgccattgttaca
ggtgcgatggtggtgattgtggtcatctttataatggttctggtgcggtgccgtcacgcc
tcacagttcaaagctgcgcagagaaaaaagcagggtgccgaatggatgtcgcccaaccag
gagaacaagcagaacaagaagaagaagcgtaaaaagaggaagtctccaaagagctccctt
ttgaactttgtcaccattgaggagaacaaacctgtcgaccctgcccacgaacccattaac
ggaaccatcagtctcccggctgagctcgaggagcctgggattggacgctttgactggaat
gccacccctactaccacgttcaaacctagcagcccagacctggcccgacactacaagtct
gcttcaccccaatcggccttccacctaaaagctgacactccggtgtctgtgaaaaagcac
catgtcatacaggagctgccgttggacaatacctttgttgggggctgtgacacgctttcc
aaacggtcctccaccagctcagatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacagggaacgcttacccgtgcccgcacg
gaactgaaccccgactatctggaccttcgttcccgagctgagctgaacccagagtactgg
acaccatgtactcctctatctcagcggcgggtcacgtttcatctgccggatggctcacag
gagagctgcagtgacagtgggctgggtgaccatgagccagtgggtagtgggccactcctc
tcacaccctctccctctggtgcaggcacaggatgagttctacgagcaggcctcccctgac
aagaggaccgaagccgatggcaactcggaccccaactctgatggacctttaggaccaaga
ggcttagtggaggccacagagatgtgcacccaagagtgtctggtgttgggacactcagac
aattgctggatgccgccaagcctgatgtcgtacccttcacccaagtcacccgtttcgtct
ttcaacaaccagaaggagtggggtaaagagagattgctcaatggccacaccctgacccga
agctggaaaagtgagcgtggaagccaggagcaatttggggacaggaagacctttgggagc
tcggaaggacattttggcagcggtggcggaggtcacatggccgacatcccgttggccagc
ctgaaatcataccagcccgcctctggccctgacagtccaaaagaacagcagctttaa
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