Myxocyprinus asiaticus (Chinese sucker): 127446137
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Entry
127446137 CDS
T08782
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127446137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127446137
03036 Chromosome and associated proteins [BR:
masi03036
]
127446137
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127446137
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127446137
PBAF complex
127446137
GBAF(ncBAF) complex
127446137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
127446137
NCBI-ProteinID:
XP_051562780
LinkDB
All DBs
Position
9:complement(16362316..16387790)
Genome browser
AA seq
1033 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTVEKSLVQNNCFSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSTHVAVP
IPSSLEEEEWVRPVMKRDKQILLHWGYWPDSYDTWIPANEVEAAVEDLPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSAPDERRDKKSSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKELDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQHMLSFPDKVKDKPADLQNFGLRTDVYSKKSGPAKKNAASATREWTDQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDTSSSLGPLAYQPI
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
ASGRQDPLYGLEGSGIAGTSLEDSDKPAEEGSEESKSSEAQSSQDKRDKVKESKDGPSEE
EEKQGENVRKEEERAREGETERETEKADSEMGDSEKEKERKEGPEEGQRDGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQHIHHQHNSNQPSNQPA
SVQCVPHQPVPNASAPPATSSPAPANTSNAQNEAPPASHCSPPTNAQAGAGHDSSTSLPG
DSLYPNAPVPPTQ
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggacccaatgtaaaatatttcgaagcgtctgatacc
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcag
gcagagccccctaccaataagtctttgtcaagtcttgtggttcaactgcttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactaagctaccgatgaagtgt
tttttggatttcaaatctggtggagctctttgtcatattctggcggcagcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaacccttcaagaatggaccgcaat
gttgagatgttcatgactgtagaaaagtctctggtacagaataactgtttttcccgacct
gtgatttacctgagttcagagatagagcccaagctgctcggaaaactgaaggacatcata
aaacgacaccaggggtctgtgactgaggataagctgtccagcactcatgtagcggtgcct
attccttctagtctggaggaagaagagtgggttcgtcctgttatgaagagagataaacag
atactgctgcactggggctactggcctgacagttatgatacatggatcccagccaatgaa
gtagaggctgctgtggaggatctgcccactgctgaaaaacctaggaaggttcatgccaag
tggattctggatctggaccagtttaatgagtggatgaatgaagaagattatgaggtgggg
gaagggggaccaaggaggaagagaatttcagcaaagactctcacagatgaagtaagcgct
ccagatgaaaggagggataaaaaatccagcagtgccaaaaagaggaaacgctccccatct
ccatcacctacccctccaccacaggagagcaagaagaaaaacactaagaaagggcccact
actccttacactaagtccaagcgaggacagagagaggaagaacaggaagatctaacaaaa
gaactagatgaaccgtcacctgtacctgcagtggaggaagcgacactacctaaaacagtg
actaagaaggactcagattccactccagtgaaaggaggcactatgactgatctggatgaa
caagaggatgagtcaatggagactgttggaaaggaggaagaagagggttcccccagtgta
aagggagagccagtgaagggttcagatctccatgaggataatgtcactgaacagactcat
catatcattatccctagctatgctgcttggtttgactacaacagtgtccatgccatagag
cgcagagctctgcctgagtttttcaatgggaagaacaaatcaaagactcctgaaatttac
cttgcttaccgtaacttcatgatcgacacttaccgactgaacccacaggagtatttgacc
tccacagcttgccgtaggaacctagctggagatgtttgtgccataatgagggtccatgca
tttctggagcagtggggcttgattaactatcaggtggattcagagagccggcccacaccc
atgggacctccacccacctcacactttcatgtgctggcagacactccttcaagtctggta
ccactacagcctaaagcatcccagacttcatcctctcagcatatgctctcattccctgac
aaagtgaaggacaaaccagccgacctgcaaaattttgggctgaggacagatgtgtacagc
aagaagagcggcccagctaaaaaaaatgcagccagtgccactcgggaatggactgatcag
gagacactactgttgttggagggtctagagatgtataaggatgactggaataaagtatcg
gagcatgtgggcagccgcacacaggatgagtgcatcctccatttcctgcgtttaccaatc
gaagacccctacctggaggatacctcctcctccctgggccctctggcctatcagcccatc
ccgttcagtcaagcaggaaaccctgtcatgagcactgtggcattcctggcctctgtggtc
gaccctcgagtggcctctgctgcagctaaatctgcccttgaggagttctcccggatgaag
gaggaggtgccggctgcgctagtggaggctcatgtgcgtcgggtggaggaggcggccaga
gccagcggaaggcaggaccctctctacggcctggaggggagcggcatcgcaggcaccagc
cttgaggattctgacaaacccgctgaggagggcagtgaagagagtaagagcagtgaggct
caatccagccaggataagagagataaggtaaaggagagcaaagatggaccaagcgaggag
gaagagaaacaaggagagaatgtcaggaaagaggaagagagagcaagagaaggggagaca
gagagagagacagagaaggcagactcagaaatgggtgacagcgagaaggagaaagagcgg
aaggagggaccagaagagggtcagagggatggagagagcgagggagagaagaaagcaaag
gtggagagagatgtaggagagggaaacctggccactgctgctgcctctgctctcgctgct
gctgctgtgaaagcgaagcacttggctgcagtagaggagaggaagatcaagtctctggtg
gctctgctggtggagacccagatgaagaaactggagatcaaactcagacattttgaagag
ttggagaccatcatggacagagagagagaggcgctggagtatcagaggcagcagcttctt
gctgatcgtcagtcgttccacatggagcagttgaagtatgcggagatgagagcccggcag
caacacttccagcatatccatcaccagcacaatagtaaccagcctagcaaccaaccagct
agtgttcaatgtgtaccccaccagcctgtccccaatgcctctgccccgcccgcaacatca
agccctgcccccgcaaacacatctaatgcccaaaatgaagctcctcctgcctctcactgt
tctccccccaccaatgcacaggctggagcagggcacgattccagcacatcactacctggg
gattctctctatccaaatgcccctgtgccaccaacacagtaa
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