Myxocyprinus asiaticus (Chinese sucker): 127446615
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Entry
127446615 CDS
T08782
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127446615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127446615
Membrane trafficking [BR:
masi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127446615
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
127446615
NCBI-ProteinID:
XP_051563634
LinkDB
All DBs
Position
9:37801036..37824101
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AA seq
864 aa
AA seq
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MSVKAFELVSAVERELVMGEKVRINIECIECCGKNLYLGTNDCFIHHFLLEEHTTAKGKL
AYNAQKLLHKYLGLKKPVVELKAASALERLIVLCDTTITVVDMVTLEPVPTGGTKLKGVT
AFCLNENPVTGDPFCVEMAVVSARRRAVQICTVHEDRVQMLKEVTTPEQPCALSLDGYFI
CLALPTQYMILNYSTGASQDLFPYDCEERKPIVKRIGREEFLLAAPGGLGMFANAEGISQ
RAPVSWSESVIAAAVCFPYVVALDEGFVTVHSMLDQQLKQTMSFRDGQLLQDFEGKVVLA
STKAVYMLVPLPLERQIQDLLASHRVEEALTLTEAAQRNIPKEKYQKLHKRILQQAGFIQ
FGQLQFLEAKEHFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLTQGDQEK
VQCFKRFLISYLHEVRSSDSANGFCEDVDTALLKLYAETGHESLLDLLVSDNACLLADSA
PWLEKHHKYFALGLLYHYNNQDSAALQMWVKIINGELQDSTRPDLFEYVVDFLSFCSNLD
LVWQHADWAIQKDQKIGVQIFIKRPISEDKKGQLNPDDVITYLRKHNQAILLYLEHLVLE
KRLQKENYHTHLAVLYADRVLGLISRPSSTEEQLSAARQKLQRLLKESSLYRVQLLIGKL
QDSELLLLERAILHGKVEEHDKALHILVHQLKDSTAAEEYCSWASACQDQIYRQKLFQQL
LSVYLDPDVPGGAQTVAAVDLLNRHADIFDAVQVLKLLPEEWSLPLLRPFLCGAVRASVH
ARCTSQVAVGLARAENLQLQHDRLKYRGGPILVSEKKGCKLCHNTFSEPDCACLPGGTPV
HIHCIAKKALDLPVEWQQENGNHI
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaagcttttgagctggtttccgccgtggagcgggagctggtgatgggcgaa
aaggtgcgaattaacatcgaatgcatagagtgctgtggcaaaaacctgtacctgggaacc
aatgactgcttcatccatcacttcctactagaggagcacacaacagccaaggggaagctg
gcctacaatgcccagaagctcctgcacaaatacctgggcctgaagaagccagtggtggag
ctcaaggctgcctcggctttggaacgtctcattgtcctctgtgatacaaccatcactgtt
gtggacatggttaccctggagcctgtgcccaccgggggcactaagctcaaaggtgtgact
gcattttgtttgaatgagaacccggtgactggggacccgttctgcgtggaaatggctgtg
gtgtcggcacgcagacgggctgtccagatctgtacagtccacgaggaccgggtgcagatg
ttaaaggaagtgaccacaccagagcagccctgtgccctgagcctggatgggtactttatc
tgcctggccctgcccacacagtacatgattctgaactacagcacaggagcctctcaggat
ctttttccttacgactgtgaagagaggaaacccatcgtcaagaggatcggccgggaagag
tttctcctggctgccccaggcggtcttgggatgtttgctaacgcagagggcatatctcag
cgtgccccagtgagctggtcagagagcgtgattgcggcggctgtgtgtttcccttatgtg
gttgcgttggatgaaggctttgtgaccgttcacagcatgttggaccagcagctcaaacag
acaatgtctttcagagatggacaactcctgcaggattttgaaggtaaggtggtgttggct
tctacaaaggcagtttatatgttggtgcctctccctctggagcgtcagatccaagacctt
ttggcaagccatcgagtcgaagaggcactgaccctcacagaagctgcacagagaaacatt
cccaaagaaaagtatcagaaattgcacaaaagaattctccaacaagcaggattcatccag
tttggccagcttcagtttttagaagcaaaagaacattttaggaagggacagcttgatgta
cgggagctgatctccctttatccactgctcctacccgcctcttcctccttcacacggtgc
catccaccacttcacgaatttgctgacctgaatcatctgacgcagggggaccaggagaaa
gtacagtgcttcaaacgtttcctcattagctacctacacgaggtgcgcagcagcgacagc
gctaatggtttctgcgaagacgtggacacagcattgctaaagctctatgcagagaccggc
cacgaaagtctcttggacttgctggtctccgataacgcctgcctcctggcagacagcgcc
ccctggctggagaagcatcacaagtattttgcccttggccttctatatcactacaataat
caagattctgctgctttacagatgtgggttaagattatcaatggggaactccaagactca
acaagaccggatctgtttgaatatgttgtggactttcttagtttctgttccaatcttgac
cttgtgtggcagcatgcggactgggcaatacagaaagatcaaaagattggtgtacagatc
ttcatcaaaaggcctatctctgaggacaagaaggggcagttaaacccagatgatgtgatt
acatatttgcggaagcacaatcaagccattttgctctacctggaacacctggtattagag
aaaagattgcagaaagaaaattatcacacacatttggctgtgctgtatgcagacagagtg
ctgggcctgatctcacgaccatcatccactgaggagcaactgtctgctgctcgccagaaa
ctacaacggttactgaaagagtctagtctgtacagagtccaattactaataggtaaactt
caggactccgagctgctgctacttgagcgagctatactacatgggaaggtagaggaacat
gacaaggccttgcacattctagtgcaccagctcaaagactctactgcggctgaggaatac
tgctcctgggcctctgcatgtcaggaccagatctaccgtcagaaacttttccaacaactc
ttgagtgtttatctagacccggatgtaccgggaggggcacaaaccgtagccgctgttgac
ttgcttaaccggcatgctgacatttttgatgcagtgcaagtgttaaagctcctcccagag
gagtggtccttgccgctactccgtcctttcctatgtggggcagtaagggccagtgtgcat
gcacgttgcacttcacaggttgcagtggggctggcccgagcagaaaacctccagcttcag
catgataggcttaagtatcgaggtggcccaatattagtgtctgaaaagaagggatgcaag
ctgtgccacaatacctttagtgagccagactgtgcctgcctgcccggtggaacacctgtc
catattcactgtatcgcaaagaaagccctggacttgccagtagagtggcaacaggaaaac
ggcaaccacatatga
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