Myxocyprinus asiaticus (Chinese sucker): 127446762
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Entry
127446762 CDS
T08782
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127446762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127446762
04121 Ubiquitin system [BR:
masi04121
]
127446762
03036 Chromosome and associated proteins [BR:
masi03036
]
127446762
03400 DNA repair and recombination proteins [BR:
masi03400
]
127446762
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127446762
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127446762
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127446762
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127446762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_5
Ank_3
Ank_4
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
PTCB-BRCT
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
127446762
NCBI-ProteinID:
XP_051563909
LinkDB
All DBs
Position
10:complement(40511661..40540927)
Genome browser
AA seq
794 aa
AA seq
DB search
MDRDPVIQSEAVTWTKTREAIAQFRKLLLCSKCSNIMKDPVCLGLCEHMLCRSCAGPHAG
DGCSMCHSPAWVKDIQINRQLSNITELFCKLDSLLNPPEVSAMTTDAVHSKETPVSKKKN
FKIWFSPKSRKVRCCVEKPEVNLSNGDQQKKPTTSPASKPKDLSVFNFTSSSQDSGSSTP
PRGKVTKKTKAKRVSPACKQARGAKKPVTRTQANQECKKLKLEAINQQWGFGKEGAIDRK
YEDDEMVSSGDDNKKSSKRVSFQCPSSQPEEPQKTVHQGENQNLSPDVEGTESGGEMPSS
PAPTSNDQQSEPVTDIPKSNKTAPGPIQSSPSRVPKRTRDNQESDYPPSTPKRPRTIPGR
RTRLSREGTTQSTPPPIEDLSPNLKTFKQSKKEQNVKPHLSPSVRRRSPATPVLGRRSPG
VRCNQSSPSYMKKNHKGETPLHLAAIKGDVEEVRKLLALGADPNLKDNAGWTPLHEACNL
GHLAVVEELLQQGALLNTPGYQNDSPLHDAVRNGHLAVVRLLVECGASQSVLNMFGLRPV
DYALTPEMQKILILAPEVPHPLTAPLSPSGRLRKAAGCVRETGPVVLIGSLLTQTQQKQL
AKAAKLLGGKQVESFTSAVTHVVVPDDPTKASTLTTLQGILNGCWILRFSWVSYSLQTGS
WAGEGEYEAGEGPLRARVNRGSLLPPLFDGCFFYLLGSFHKPPKHELLQLVKEGGGHLLS
RQPKPDSDVTQTLSAAAYHAQPRSDQTLCTQYILYEPQSSYKPKRVRMGKVWSAPSTWLL
DCISAFQLLPVPEP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgaccctgtcatacagtcagaggcagtgacatggaccaagacgagagaggcg
attgcacagttccgaaaacttctgctgtgttcaaaatgctcaaacatcatgaaagaccct
gtgtgcctagggctctgtgaacatatgctttgcaggtcttgtgctggcccccacgctgga
gatggctgtagtatgtgccacagtcctgcatgggtgaaagacattcagatcaacagacag
ctcagtaacataacagagctcttctgcaagctggactccctactgaaccctccagaggtc
tcggccatgaccactgatgctgtacactcaaaagagacccccgtctccaagaagaagaac
ttcaagatatggtttagcccaaagagtcgcaaagtacgctgttgcgttgagaagcctgag
gtaaacttatctaatggagatcagcaaaagaaaccaactacatcacctgcgtccaaacct
aaagacctgtctgtcttcaacttcacctcatcctcccaggactctggatcctcaactcct
ccacgtggtaaggtaactaagaaaacaaaggcaaagagggtcagcccagcctgcaaacaa
gcccgtggtgctaaaaagcccgtaacaagaactcaggctaatcaggaatgtaaaaagcta
aagctagaggccatcaaccaacagtggggctttggtaaagaaggtgctattgacagaaag
tatgaagatgatgagatggtgagctctggagatgacaacaagaaatccagtaagagagtg
tcttttcagtgccccagcagccagcctgaggaacctcagaagactgtccaccaaggagaa
aatcaaaatctcagtcctgacgttgaaggcactgagtctggtggtgagatgccaagctcc
ccagcacctacttctaatgaccagcagtctgagcctgtcacagatattccaaaatcaaac
aaaactgccccagggcctattcaatcttccccttccagagtaccgaagagaaccagagat
aaccaggagagtgattatccacctagtacaccaaaaagacccagaacaattccaggacgg
aggacgagattatctagagaaggaaccacacagtccacacctcctccaattgaagacctt
tctccaaacctaaaaactttcaaacagtccaaaaaggagcagaatgtgaagccgcacctc
tcaccttcagtgagaagaaggtcgccagctacccctgtccttggaaggaggtctcctggg
gtaagatgcaaccagagcagtccatcttacatgaagaagaaccacaagggagagacgcca
ctgcacttggctgcgataaagggtgatgtggaggaggtacgaaagctccttgctctggga
gccgaccccaacctgaaggacaatgcaggctggacaccactgcatgaggcttgtaatctc
ggtcacctggcagtggtggaagaactgctacagcagggggcactgttgaatactccaggc
tatcagaatgactcgccactgcacgatgcagtgaggaacgggcacctagcagtggtcaga
ctcttggttgaatgtggcgcatcccaaagtgttctgaatatgtttggcttgcggcctgtg
gattatgcgctgactccagaaatgcagaagatcctaatattggcccctgaggtaccccat
cctttgacagcccccctgagcccatccggcagactccgtaaggctgcaggctgtgtgagg
gagactggtccagtggttctgataggcagtctactaacgcagactcagcagaaacagctt
gccaaagcagctaaactccttggagggaaacaagtggaatcctttactagtgcagtcacc
catgtggttgtaccagatgatcccaccaaggcttctaccctgaccacactgcagggcatc
ctcaatggctgctggatccttcgtttcagctgggtgagctatagccttcagacaggcagc
tgggccggagagggcgagtacgaggcaggtgaaggccccctgcgtgcccgtgtgaacaga
ggtagcctgctgcctccactctttgatggatgtttcttctacttactgggttccttccac
aagccccctaaacatgagttgctgcagttagtgaaggagggaggcggtcaccttctgagc
cgccagcccaaacccgacagtgacgtcactcaaaccctgagtgcagcagcttaccacgcc
caacctcgttcagaccagaccctctgcacacagtatatcttatatgaacctcagagctct
tataaacccaagcgggttcggatgggtaaggtctggtcggctccctccacttggcttctg
gactgcatcagtgcctttcaacttctgccagtgccagaaccctag
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