Myxocyprinus asiaticus (Chinese sucker): 127447504
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Entry
127447504 CDS
T08782
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127447504
03015 mRNA surveillance pathway
127447504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127447504
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127447504
mRNA cycle factors
P-body specific factors
127447504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
127447504
NCBI-ProteinID:
XP_051565383
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All DBs
Position
10:complement(35339528..35354895)
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AA seq
481 aa
AA seq
DB search
MRSDKETRTGSRERGSVEIQFRECPREQDNVVVNPKHKEEKKEIFTKVVIRRLPPSLSKD
QLEEHLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNQEDIIIFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKVSKKKLKKKDAKAGTIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELVAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRQREEEKRKRREEEK
RKRKEAEKLKKLSEKEIKIKLLKKCDRDDDMDSDRLKDKGDCGGTEKNRWEKTAGHNKSK
ETKDNRGQIESDKEQREGHGRRQRDKEHRGRDEERKRQRHHLEFDKFMRRKEETKWGKGY
CQDRAKKDQHHGYSYYPETGDKLGKEDREDMSRRKERIRNKSVLVHQEKRTSQSEGPDQI
GGALPAKDRPAMQLYQPGSRNRKRMGCGNKNFDFPPISPEHRGEQCYKTIIGTGSENSAD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgacaaggagacgaggacaggaagcagggagagaggcagcgtcgagatccag
ttcagggagtgtccgagggagcaggacaacgtcgtagtgaacccgaagcacaaagaggag
aaaaaggagattttcaccaaggttgtcatacgccgcctgccacctagtctatcaaaagac
cagctcgaggagcatttgagtcctcttccatcttttgactattttgagttcttccctgca
gatcagagcttatacccacatctcttctcaagagcatacatcaacttcaaaaaccaagag
gatattattattttcagggatcgttttgatggctacgtattcattgacaataaaggtcaa
gagtatccagctgttgtagaatttgccccatttcagaaagtctccaagaaaaagttaaag
aagaaagatgctaaagcaggaaccattgaagaagatccagaatacagacgatttctggaa
aactactcttgtgatgaggagaaatcaatggccaacccagaaacactattgggagagatt
gaagctaaaacacgggaactcgtagccaaaaggacgacacccttactggaatatattaaa
aacaagaagttagagaaacagagaataagagaagaaaagagagaggaaaggcgaaggaga
gaactggaaaagaagagacagagggaggaggagaagaggaagcgcagagaagaggagaaa
cgaaagcgaaaggaggccgaaaagctgaagaagctttctgaaaaagagataaagatcaag
cttttgaagaagtgtgaccgagacgatgacatggactcagacagactgaaagataaagga
gactgcggagggacagaaaaaaacagatgggaaaaaacggcaggacacaataagtcaaaa
gagactaaggacaataggggccaaattgagagtgacaaggagcagcgagagggtcatggc
cgtcgtcagagggacaaagagcatcgcggcagagacgaggagcgtaaacgccagaggcat
catttggagtttgataagtttatgcgacgcaaggaggaaaccaaatggggcaaaggatac
tgccaggacagggccaagaaagaccaacatcatggctattcctattatccagagacagga
gacaaactgggaaaagaggacagagaggacatgtctaggaggaaagaacggattcgtaat
aagtctgtgttagtgcatcaggagaaaaggacttcccagtctgaggggccagaccagata
ggaggggctctgccagcaaaggaccgaccagcgatgcagctgtaccaacctggttctcga
aaccgcaagcgcatgggctgtgggaacaagaactttgactttccacccatttctcctgag
cacagaggagagcaatgctacaagacgatcatagggacaggatctgagaatagtgcagat
gagtga
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