Myxocyprinus asiaticus (Chinese sucker): 127447517
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Entry
127447517 CDS
T08782
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04382
Cornified envelope formation
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04518
Integrin signaling
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127447517
04518 Integrin signaling
127447517
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127447517
09142 Cell motility
04820 Cytoskeleton in muscle cells
127447517
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127447517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127447517
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127447517
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127447517
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127447517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127447517
NCBI-ProteinID:
XP_051565409
LinkDB
All DBs
Position
10:complement(12100950..12238566)
Genome browser
AA seq
1672 aa
AA seq
DB search
MEGENHLKYWNTLRCLLLCFAVLVLTTEVNAGVKKYSGPCGGRDCSGGCQCYPEKGARGL
PGFLGSQGPTGPPGRQGDPGLQGPKGEKGDHGKGGAMGPKGSVGIEGVPGFSGADGVPGH
PGPSGPRGKPGADGCNGTRGDSGTPGIPGSKGAPGISGYKGMKGKKGEPLNIEVFMERYR
GDPGQSGYEGFIGPPGNPGYIGLPGEQGLLGPPGFKGSKGQKGESTKILPGVKGDQGEVG
EPGQPGPYQHTRPPPADFQGRKGATGYKGEPGDVEFLSPKGEDGVSGFPGTRGSPGLKGW
PGLMGDKGQPGFPGNTGRKGDRGETGELIFTERPYYDAEVGPPGPPGERGPIGNPGPMGD
KGLPGLPGPPASEQTGTFDLWGPEGPRGTKGKKGEAGEPGTPATQPGPPGFVGQPGVPGP
PGPKGSLEEYFKGAPGPRGRPGNAGKKGPKGDHGQCECQIKSSPPGAPGPPGELGDFGMA
GEWGQQGDQGDPGPKGDEGVPGFPGARGEPGPKGRKGELTTATVKGLPGDPGDPGASGYP
GEQGSPGRIGEDGAPGFQGPAGEGPVGEPGEKGYPGRPGLPGLTGPAGEPGQVLGATKGT
KGLPGDEGRIGTDGNPGLPGTPGDCSPGEQWNIAGECFGLPGPPGETGLPGLTGLDGFHG
VPGPKGFPGLSGEDGAKGEQGEPGRGGPPGPMGFVGPRGDLGHPGSKGEEGPPGLSGKSG
LDGALGQKGEHGEVLGASSGAPGEPGLPGQRGATGLPGDPGSKGHPGMEGMPGMIGLKGE
RGPEGFQGEIGRPGPAGKFGYPGQPGQTGPPGPLGNIGQPGPSGLRGDQGDPGPPGPWGF
KGVIGDPGNVGVPGNIGLPGDPGQQGPFGYNGLQGLKGFKGGQGMTGFPGKTGQQGVKGT
VGLQGETGFPGQQGAKGAPGFPGQKGDRGLMGPPGEKPIIHITPHMKEVMKGAKGEHGNK
GEPGFTGPRGQKGFPGVPGREGQHGHPGEPSDKKGSPGPPGLEGDLGPKGMPGTTGLPGI
DGFPGMSGPRGDKGSPGAYGRPGDHGIKGIKGDLGPTINLPGSTGLRGETGLPGTSGEKG
LVGHPGDRGSTGFDGIEGVKGYPGDPGKAGPPGSDGFQGFPGNQGQKGWPGEPGQPGTPG
IQGQPGQKGFPGLKGIFGLDGLKGQKGIQGVPGSENLGPPGNPGTKGEIGEAGIPSTEVG
FPGALGLKGSLGDPGAKGESGRRGLQGPQGPQGFSDIPGVPGDPGFSGSKGLPGFPGPRG
IPGDPSPFGAKGDKGNPGAYGFTGEKGVQGHRGDRGLAGEPGVSGRRGEKGEPGMMGFPG
RHGFQGDRGPFGPKGDTGPPGFPGLPGAKGLPPVPEKLPGERGPPGPMGIQGPHGQIGNP
GPAGPPGDPGFMGPKGQKGMPGFSGIPGNPGFRGESGQMGHPGLQGEEGNRGQPGLPGRA
GMPGRSVNVGYLLVKHSQSDQIPMCPVGMYKLWDGYSLLYFEGQEKAHNQDLGLAGSCLP
RFHTMPFLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEESEIKPYISRCSVCEAPSVA
IAIHSQDITIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECN
GAKGTCHYFANKHSFWLTSIDQSFQSSPASETLKAGQLLSRISRCQVCMKNL
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagaaccatctaaagtactggaacacattgaggtgtttgctgttgtgcttc
gcagtccttgtccttacaacagaggttaacgcaggcgttaagaagtacagtggaccatgt
ggaggcagggactgcagtgggggttgtcagtgttatcctgagaagggtgcaaggggtttg
cccggtttcctaggctcccagggccccacaggccctccagggcgccaaggagacccaggc
ctccagggccctaaaggagagaaaggagaccatggcaaaggaggtgccatgggtccaaaa
ggaagtgtgggaatagagggggttccagggtttagtggagcagatggtgttccgggtcat
ccagggccatctggtcctcgtggaaaacctggagctgacggttgtaatggaactcgtgga
gattctggaacgccaggcattccaggatccaaaggcgcccctggaatatcaggctacaaa
ggaatgaaggggaagaagggtgaaccgttgaatattgaggtctttatggaaagatacagg
ggagatccaggacagtcaggctatgaagggtttattggaccacctggaaacccaggttac
ataggactgccaggagaacaaggtcttttgggtccccctggttttaaaggctcgaaagga
caaaagggtgaaagcactaagatattaccaggagtcaaaggagatcagggggaagttgga
gaacctggccaaccaggaccttaccaacacaccaggccaccccctgcagattttcagggt
agaaaaggtgcaacaggttataaaggagaaccaggagatgtggaatttctgtcacctaaa
ggagaggatggtgtttctgggtttccagggacacggggaagcccaggattaaaaggctgg
ccaggacttatgggtgacaaaggacagccaggtttcccaggaaatactggccgcaagggg
gacagaggagaaaccggagagctgatattcacagaacgtccatattacgatgcagaagtt
ggtcctccaggacctccaggagagcgtggcccaataggaaatcctggtcctatgggtgat
aaaggactgccaggtctcccaggcccccctgcttctgaacaaacagggacatttgatctg
tggggcccagagggaccaaggggaacaaaaggaaagaaaggtgaagctggagaacctggt
acacctgccactcagcccggcccacctggctttgttgggcagcctggagtccctggacca
cctggacccaagggatcattggaagaatatttcaaaggggcaccaggaccccgtggacgt
ccaggaaatgcaggaaaaaagggaccaaagggtgaccatgggcagtgtgaatgccagata
aaatcttccccgcctggtgctccgggccctcctggtgagcttggtgactttggcatggca
ggcgagtggggtcagcagggtgatcaaggtgacccaggacccaaaggggatgaaggtgtg
cctggttttcctggtgctcgaggggagcctggacccaaggggagaaaaggagagctgacc
acagctacagtgaaaggattaccaggtgacccaggtgacccaggtgctagtggttaccca
ggagagcaggggagccctgggcgtattggagaagatggtgcacctggttttcaaggacct
gctggagaaggtccagtaggggagcctggagagaagggttacccaggtcggccaggtctc
ccaggtctaacaggcccagccggggaacctggtcaagttctcggagcaaccaaaggtaca
aagggccttcctggagatgaaggaagaattggtactgatggaaatccagggttgcctggc
actccaggggactgtagcccaggagagcagtggaatattgcaggggagtgttttggactc
cctgggcctccaggagaaacagggctgcctggccttactgggttggacggatttcatgga
gtaccaggtcccaaaggctttccgggtctttctggagaagatggggccaaaggagagcaa
ggtgaaccaggaagaggaggtcctcctggaccaatgggttttgttggccctcgaggggac
ttaggacatcctggctccaaaggtgaagaaggacctccaggcttatctggtaaatcaggt
ttggatggtgctctagggcagaagggtgaacatggtgaggttttaggagcatcttccgga
gcccctggagaaccaggactgccaggacagaggggtgccactggccttccaggagaccca
ggctcaaaaggacacccaggtatggaaggaatgcctggtatgatcggcctcaaaggtgaa
agaggccctgaaggttttcagggagaaataggaagacctggacctgcagggaaatttgga
tatcctggacagcccggacaaacaggacctcctggtcctcttggaaatattggacaacca
ggtccgagtggattaagaggagatcagggcgaccctggtcctcctgggccctggggattt
aagggtgtcattggagaccctggaaatgttggtgtaccaggaaatattgggctaccggga
gatcctggacaacaggggccttttggttacaatggtctccaagggctcaaaggtttcaaa
ggaggtcagggcatgacaggcttccctggaaagactggtcagcaaggtgtgaaaggaact
gtaggactgcaaggagagacaggcttcccaggacaacaaggtgcaaaaggagctcctggc
tttccaggtcaaaaaggtgacagagggctgatgggccctccaggagaaaagccaatcata
catataacacctcatatgaaagaagtcatgaagggggctaaaggagaacatggaaataag
ggagaacctggcttcactggtccaagaggccagaaagggtttccaggtgttccaggaaga
gaagggcaacatggacatccaggagaacccagtgataaaaaaggttctccaggtcctcct
ggactagaaggagatctagggcctaagggaatgccaggcactacaggactccctggaata
gatggtttccctggaatgtctggaccgaggggtgacaaaggctcacctggtgcctatgga
cgaccaggagatcatggaattaaaggaatcaaaggtgacttgggtccaaccatcaatctt
ccgggatcaacaggactgagaggtgaaactgggctccctggaacttctggtgagaagggc
ctggtaggacatcctggagatagaggaagcactggttttgatggcattgagggggtgaaa
ggctatccaggtgaccctggaaaagcaggaccaccaggctctgatggctttcagggtttc
cctggaaaccagggtcaaaagggttggccaggagaaccaggacagccaggaacccctgga
atccaaggccaacctggacaaaaaggatttcctggtctgaaaggcatttttggattggat
ggcctgaaaggtcaaaagggtatccagggggttccaggttctgaaaacttgggacctcca
ggtaaccctggaacaaaaggagagataggagaagccggtatccccagcacagaggttggc
tttccaggagctttgggcctcaagggttcccttggagatccaggtgctaagggtgaatct
gggcgtcgaggtctacaaggacctcagggcccgcaagggttctctgatataccaggagtg
ccaggcgaccctggcttttctggcagtaaaggacttccaggctttcctggacccagaggg
atccccggtgatccatctccattcggagcgaaaggagacaaaggaaacccaggggcatat
ggattcactggagaaaagggagtccaggggcacagaggagatagaggactggcaggagaa
cctggagtgtcaggaagaagaggtgaaaagggagaaccaggaatgatgggatttccagga
agacatggtttccaaggcgacaggggcccttttggacctaaaggagatactggaccccca
ggttttcctggcttacctggtgctaaaggactcccaccagtaccagaaaaattaccaggg
gaaagaggaccacctggtccaatgggtattcaaggaccacatggacagattggaaaccct
ggccctgctggacctcctggagatccagggtttatgggtccaaagggccagaaaggcatg
ccaggtttttcgggaataccgggaaatccaggcttccgtggtgaatctggacaaatgggc
caccctggtctgcaaggcgaggaaggtaaccgagggcaacctggtttacctggtcgtgct
ggaatgcctggccgcagtgtcaatgtcggttacctgctggtgaaacacagtcagtctgac
cagatccctatgtgccctgtgggtatgtacaagttatgggatggttacagtcttctgtac
tttgagggacaggagaaggcccacaaccaagacctgggtctagctgggtcatgtctccct
cgatttcataccatgcccttcctgtactgcaatcccggtgacgtatgctactatgctagt
cgaaacgacaaatcctattggctgtccaccaccgcaccgattcctatgatgcctgtggaa
gagtccgagataaagccgtacatcagccgctgttctgtgtgtgaagctccatctgtagcc
attgcaatacacagtcaagatataaccatcccacaatgtcctgctgggtggagaagtttg
tggattggctattccttcctcatgcacacagcggctggagatgagggtggcggtcagtct
ctggtgtctccaggctcttgtctagaagatttccgcaccactcccttcatcgagtgtaac
ggggccaagggtacatgtcactacttcgccaacaagcacagtttttggttgacgtctatc
gatcagtccttccagagttcccctgcctctgagacactcaaagccggtcagctcctgtca
cgcatcagccgctgccaagtgtgtatgaagaacctgtga
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integrated database retrieval system
