Myxocyprinus asiaticus (Chinese sucker): 127447518
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Entry
127447518 CDS
T08782
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04382
Cornified envelope formation
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04518
Integrin signaling
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127447518
04518 Integrin signaling
127447518
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127447518
09142 Cell motility
04820 Cytoskeleton in muscle cells
127447518
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127447518
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127447518
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127447518
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127447518
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127447518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127447518
NCBI-ProteinID:
XP_051565410
LinkDB
All DBs
Position
10:12238674..12347721
Genome browser
AA seq
1640 aa
AA seq
DB search
MRLSYGTLFLLTVFLSVGKSTAKGVGCSGSSCGGCDCSGVKGAKGERGFPGLTGVIGFPG
LQGHEGPPGPIGPKGDAGVPGVPGMKGTRGPPGVAGFPGHPGIPGIPGQEGPPGSPGIPG
CNGTKGERGFDGLPGVPGLQGPPGIPGLEGMKGDPGGLTSVIIPQKGEKGFPGQPGSSGP
PGNPGLPGPIGPPGPVGHLGRPGDPGQKGEPGDKLTFIGEKGQKGERGLSGPPGPPGRPE
EVEGTGAIYIPGPPGERGSKGEKGDKSFCVPHQHGIKGEPGPHGPQGKPGKDGQIGEKGE
RGFPGSPGFDGLKGDKGERGPPAYVNVLPGVPGPPGLPGAEGERGYPGERGDPGPPGRNI
QGPVGPPGFPGEIGQKGDKGSDGLSLRGRDGADGPPGPPGPPGEINDDCVIAKGPPGPPG
HPGLQGEVGQKGDQGDTCTECTAFGPPGLPGPQGPKGQQGFPGAAGSKGEKGVAGPAGPA
GNPGQGGSPGLMGAPGAHGEPGDIFVAPGLKGDKGLPGTIGSRGSPGLDGLPGKDGRPGQ
PGPKGEPAREGIKGDRGQDGDPGITGLTGERGPPGLPGIGRPGEPGEKGTAGFPGAPGRS
GSPGPKGEAGKILSLPGPQGAPGPRGETGRPGLQGDRGLPGEIGVPGFPGNKGDPGLPGI
GLPGPPGPKGYSGIPGAAGLPGEPGRPGKDGFPGRAGTPGQKGEPGRGLPGPKGSIGQPG
VPGFPGEKGNPGMTGVPGTEGRTGPPGPQGIKGDAGSPGVHGLVGPPGPPGLGEPGSPGP
MGPPGGPGPLGQTGIKGEKGHQGLPGLDMPGPQGDKGSPGVPGLPGSKGLPGQPGIPGKD
GFPGERGPKGEIGVMGMTGPPGSLGFIGNPGAPGPRGDPGSTGPRGQFGDPGPKGERGEQ
GLQGPPGNMSDVDMEHMKGEKGDIGDRGDPGPLGEKGNAGNTGDPGMPGKDGMPGSPGQP
GDKGDPGMPGVPGRFGEPGDPGPRGDMGYPGQMGPKGTKGIGGLPGHPGFKGVDGSKGEK
GDPGQAGIGIPGPPGEKGNIGAPGFPGEPGHKGQKGTMGIPGTPGSQGPKGDLGLIGYPG
NPGKPGEKGVSGLPGSPGEPGFSGRPGEPGLQGPPGPHGEKGEPGVDGIPGFTGERGEPG
VPGKGLPGTSGQPGSKGDKGNPGLPGIPGSPGIPGSKGDKGLPGFPGDQGRPGERGLPGA
SMEGPKGDRGAYGEPGEKGTTGDPGPPGIPGNAGAKGEKGDVGFPGPQGSQGYKGDKGST
GIHGEPGLPGYNGPKGEMGQQGVPGFPGIKGEQGVLGPKGEGGDRGFPGLKGTEGPPGPP
GPHTFVKGDPGFPGPQGPQGPLGLQGFPGPKGTQGMMGHPGLKGTDGTPGYNGHPGAKGE
PGQTGPSGPRGYPGPPGPDGIPGHIGPPGPSSMDHGFLVTRHSQTIEVPQCPEGTTPIYD
GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM
PMSMAPVTGQSIRPFISRCAVCEAPAMVIAVHSQTIQIPPCPQGWDSLWIGYSFVMHTSA
GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIDDNEMFTKPVPTT
LKAGNLRTHISRCQVCMKRV
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgcggctttcatacggcactctttttcttctgacagtctttttgagcgtaggcaagagt
acagctaagggtgtaggttgctcagggtcttcatgtggaggatgtgactgcagtggtgtg
aaaggggcgaagggggagagggggttccctggtttgactggtgttattggattccctgga
ttacaaggtcatgagggccccccagggccaataggaccaaagggagatgcaggtgtgcca
ggagttccaggcatgaaaggaaccagaggcccacctggtgttgctggtttcccaggacat
ccaggtattccaggtattccaggacaagaaggcccacctggatctccaggaatcccgggc
tgtaatggaacgaagggggagcgtggttttgatggccttccaggcgttcctggactgcag
ggaccaccaggtattccaggtttggaaggaatgaagggagatccaggtggtttaactagt
gtaataatccctcaaaaaggagaaaagggctttccaggacaaccaggttcatcaggacca
ccaggaaatccgggactaccagggccaattggcccacctggaccagtaggacatcttgga
agacctggtgatcctggccaaaagggagagccgggtgacaagctgacatttattggggag
aaaggacaaaagggagaaagaggtttatcaggtcctcccggtccacctggaagaccagag
gaggtcgaaggcactggcgcaatttatattcctggaccaccgggtgagagaggctcaaaa
ggagagaaaggagacaagagtttctgtgtaccacatcaacatggaatcaaaggtgaacca
ggaccacatggaccacaggggaaaccaggaaaagatggacagattggagaaaagggggaa
aggggctttcctggtagtcctgggtttgatggcttgaagggtgacaaaggagaaagagga
cctccagcatatgtcaatgttcttccgggggttcctggtcctcctggccttcctggagca
gaaggagagagaggttaccctggggagcgtggtgatcctggtcctccaggaagaaatatt
cagggccctgttggacctcctggcttccctggagagattggccaaaagggagacaaagga
tctgatggactgtctcttagaggacgtgatggagctgatggaccacccggaccacccggg
cctccaggagaaatcaatgatgattgtgttattgcaaaaggacctccaggcccccctgga
catccagggttgcaaggagaggtgggacagaaaggtgaccaaggtgacacatgcacagaa
tgcactgctttcgggcccccaggtttgcctggtccccaggggccaaagggtcaacaaggt
tttcctggagcagcagggagtaaaggagagaagggtgtggcaggacctgctgggcctgct
ggaaatcctggtcagggtggctctccaggtttaatgggtgcccctggtgctcatggtgag
cctggcgatatatttgtggcaccagggctgaaaggcgataaggggttaccaggtactatt
ggaagcagaggatctccaggtcttgatgggctcccaggaaaagatggcagaccagggcaa
cctggacccaaaggagagcctgctagagaaggtattaagggtgaccgtggccaggacggt
gatcctggtataactggcttgacaggtgagagaggtcccccaggtcttccagggataggt
cggccaggtgaacctggagaaaaaggcactgcagggtttcctggtgcaccgggaaggtca
ggatcaccaggacctaaaggtgaagctggcaagattttaagtttacctggacctcaggga
gcaccagggcctcgtggagagactggcagacctggtcttcaaggtgatagaggtcttccg
ggtgaaattggagttccaggattcccaggaaacaaaggtgaccctggactgccaggaatt
ggacttcctgggcccccagggccaaaagggtactctgggattccaggtgctgctggactt
ccaggagagcctggtcgtcctggcaaggacggcttccctggtcgtgcagggacacctggg
caaaaaggtgaacctggtaggggtcttccaggtcctaagggctccataggccagccagga
gtgccaggatttccaggggagaagggcaatcctggaatgacaggggttcctggaactgag
ggacgtacagggccaccagggcctcagggaattaaaggtgatgccggatctccaggagtt
catggtttggtggggccaccaggtcctccagggcttggagaacctggatcacctggacca
atgggaccacctggaggccctggacctcttggtcagacaggtataaagggagaaaaaggt
catcaaggactacctggtctggacatgccaggcccacaaggagacaagggtagccctggt
gttccagggctaccaggatctaagggtttgcctgggcaaccaggaattcctggaaaagat
ggcttccctggtgagcgtggtccaaaaggagaaattggtgtcatggggatgacaggaccc
cctggatcgctaggtttcattggaaaccctggggcaccgggaccaagaggtgacccgggt
tcgactgggcccaggggacagtttggtgacccgggtccaaagggtgagagaggagagcaa
ggtctacaggggccacctggaaacatgagtgatgtggacatggagcacatgaaaggggag
aaaggagacattggagataggggtgatcctggtcctttgggagaaaagggtaatgctgga
aacactggggaccctggaatgccaggaaaggatggaatgccaggatcacctggacagcca
ggtgacaaaggtgaccctggtatgcctggggtgccaggacgttttggagagcctggagac
ccaggtccaagaggagacatgggatatccaggtcaaatggggccaaaaggcactaaaggg
attggtgggttaccgggccaccctggatttaagggtgttgatggctccaaaggagaaaaa
ggagatcctggtcaggcaggaataggaatccctggtccccctggagagaagggaaatatt
ggtgcccctggtttccctggtgaacctggacataagggacagaaaggtacaatgggaatt
ccaggtactcctggaagtcaaggacctaaaggagacctgggactaattggttacccaggc
aatccagggaagccaggtgagaaaggtgtcagtgggttgcctgggtctccaggagaacct
gggttttcaggacgtcctggtgagcctggtctacagggtcctccaggtccacatggggag
aaaggtgaaccaggagtagatggcattcctggattcactggagagaggggagaacctggt
gtaccagggaaaggattacctggtaccagcggtcagcctggcagcaaaggtgacaaagga
aaccctggtcttcctggcattcccggcagtccaggtattcccggaagcaaaggagacaag
ggtcttcctggattcccaggggaccaaggtcggcctggagagagaggtcttccaggagca
tccatggagggtccgaaaggggacaggggagcttatggggagccaggagaaaaaggtaca
actggtgatccaggcccacctggtataccaggcaatgctggagctaaaggagaaaaagga
gatgtgggctttcctggcccacaaggctctcaaggttataaaggagacaagggttccact
ggcatccatggtgagcctggattgcctggctataatggaccaaagggtgagatgggacaa
cagggtgttcctggattccctggtataaagggtgagcaaggagtgcttggacctaagggt
gagggtggtgacagaggattcccagggcttaagggtactgaaggcccccctggaccacct
ggaccacacacatttgtaaagggagatcctggttttccaggaccacaaggtccccaaggt
ccacttggactccaaggcttccctggaccgaaaggaacacagggcatgatgggacatcca
ggtttaaaaggaactgacgggacacctggctataatggacatcctggagccaaaggagag
cccggacaaactggaccctctggccccagagggtaccctggtcccccagggcctgacggt
atcccaggacatattggccctcctggcccttcatcaatggatcatggcttcctggttacc
cgccacagtcagaccattgaagttccacaatgtccagagggaaccacgccgatctatgat
ggatactccctgctttatgttcagggcaacgagcgatcacatgggcaagacctaggtaca
gctggtagctgtctaaggaagttcagtcctatgcctttcctcttctgcaacatcaacaat
gtatgtaactttgcatctcgtaatgactattcctactggctcacctctcctgagcccatg
cccatgagcatggcccctgttaccggtcaaagcatcagaccctttatcagcagatgtgct
gtatgtgaggctcctgctatggtgatagctgtgcacagtcagaccatacagatcccaccc
tgtcctcagggttgggattccctctggattggatactctttcgtcatgcacaccagtgct
ggtgctgagggttcaggtcaggctctggcctctcctggctcttgtctggaggaattccgc
tctgctcccttcatcgaatgtcatggtcgtggcacgtgcaactattatgccaattcctac
agcttctggttagccaccatagatgacaacgagatgtttacgaaacctgtccctacaaca
ctaaaggctggaaatctgcgaactcacatcagcaggtgtcaagtgtgcatgaagagggta
tag
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integrated database retrieval system