Myxocyprinus asiaticus (Chinese sucker): 127447950
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Entry
127447950 CDS
T08782
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127447950
03015 mRNA surveillance pathway
127447950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127447950
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127447950
mRNA cycle factors
P-body specific factors
127447950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
127447950
NCBI-ProteinID:
XP_051566163
LinkDB
All DBs
Position
11:complement(36002125..36012385)
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AA seq
511 aa
AA seq
DB search
MRNVQASRFLLLKLPRELADSGQRRGRNGEMRSEKEPRTGSRERGSVEIQFGECQREQDN
VAVNPKHKEEKKEIFTKVVIRRLPPSLSKDQLEEHLSPLPSFDYFEFFPADQSLYPHLFS
RAYINFKNQEDIIIFRDRFDGYVFIDNKGQEYPAVVEFAPFQKVSKKKLKKKDAKAGTID
EDPEYRRFLENYSCDEEKSMANPETLLGEIEAKTRELIAKRTTPLLEYIKSKKLEKQRIR
EEKREERRKRELEKKRQREEEKRKRREEERRKRKEAEKQKKLSEKEIKIKLLKKCDRDDD
MDSDRLKDKGDSGEAEKNRWEKTAGNNKSKDTKDNRGQIESDKEQRESHGRRQRDKEHRG
RDDERKRQRHHYEFDKFMRRKEETKWGKGYCQDRAKKEQNHGYTYCPETGDKLGKEDRED
MASRKERIRNKSVLVHQEKRTSQSEGPDQIGGALPAKDRPAMQLYQPGSRNRKRMGSSNK
TFEFPPISPEHGGEHCYKTIIGTGSEKSADE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatgtgcaagcctcgcggtttttgcttctgaaactcccgcgagagttggcggat
tccggacagcgaagagggagaaatggagaaatgaggtctgaaaaggagccgaggacagga
agcagggagagaggcagcgtcgagatccagttcggggagtgtcagagggagcaggacaac
gtcgcagtgaacccgaagcacaaagaggagaaaaaggagatcttcaccaaggttgtcata
cgccgcctgccacccagtctatcaaaagatcagctcgaggagcatctgagtcctcttcca
tcttttgactatttcgagttcttccccgctgatcagagcttatacccacatctcttctca
agagcatacatcaacttcaaaaaccaagaggatataattattttcagggatcgttttgat
ggctatgtcttcattgacaataaaggtcaagaatatccagctgttgtagaatttgcccca
tttcagaaagtctccaagaaaaagttaaagaagaaagatgctaaagcaggaaccattgat
gaagatccggaatacagaagatttcttgaaaactactcttgtgatgaggagaaatcaatg
gccaacccagaaacactattgggagagattgaagctaaaacaagagaactcatagccaaa
aggacaactcccttactggaatatattaaaagcaagaagttagagaaacagagaataaga
gaagaaaagagagaggaaaggcgaaagagagaacttgaaaagaagagacagagggaggag
gagaagaggaagcgcagagaggaggagagacgaaaacgaaaggaggctgagaagcagaag
aagctttctgaaaaagagattaagatcaagcttttgaagaagtgtgaccgagatgatgac
atggactcagacagactgaaagataaaggagacagcggagaggcggaaaagaacagatgg
gaaaaaacggcaggaaacaataagtcaaaagataccaaagacaataggggtcaaatcgag
agtgacaaggagcagcgagagagtcatggccgtcgccagagggacaaagagcatcgcggc
agagatgatgagcgtaaacgccagaggcatcattacgagtttgataagtttatgcgacgc
aaggaggaaaccaaatggggcaaaggctactgccaggacagggccaagaaagagcaaaac
catgggtacacctactgtccagagactggggacaaactgggcaaagaggacagagaggac
atggcgagcaggaaagaacggattcgtaataagtctgtgttagtgcatcaggagaaaagg
acttcccagtctgaggggccagaccagataggaggggctctgccagcaaaggaccgacca
gcgatgcagctgtaccaacctggctcccgaaaccgcaagcgcatgggctccagcaacaaa
acctttgaatttccacccatctctcctgagcatggaggagagcactgctacaagacgatc
ataggaacaggctcagagaaaagtgcagatgagtga
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