Myxocyprinus asiaticus (Chinese sucker): 127447958
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Entry
127447958 CDS
T08782
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127447958 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127447958 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127447958 (si:ch211-269e2.1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
WipA_N
Motif
Other DBs
NCBI-GeneID:
127447958
NCBI-ProteinID:
XP_051566175
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Position
11:35646721..35677489
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AA seq
1176 aa
AA seq
DB search
MIAEPTLLSRSVQKENSIVDISSCASVHHLSSEINENRQKTVRGKRKARECSENVKCKRS
KSSSGSLGRAEEEQLKNGDVEAVTLFEVVSMGRNAMQAVVDDWIDAYAVDRDAALLDLIS
FFIQCSGCKGMVTAEMFQSKQGTDVMSKMVEDLDEDTGLQYKKFLAFPWILTVTWPLDMD
SGEYPLIMPGLYWKRFRTHFCEFVSVLVAQCQNCVIFDGYLLNTLISLLTELSDSRVRAF
RHTCTLAAVKLLSALVNVALNLSVSIDNSQRLYEVELPKTPSKRASPRLERIQRKISELQ
DRKFEIENMVDAIFKAVFLKRYRDVIPEIRAICMEELTVWMKLYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQGLYQDQISPKMDLFTIRFKERMISMTLDKDHEVAIQAVRLLMV
ISQSCEDFLSPDDYKQVFQFVYCSHRPLASTAGEFLYNRLLSNPELSRPRDAASEQDRHR
ELMLARVRALIRFHTESELHQHVLYLVDSLWDSAAALLKDWNGLTSLLLPQTSCQEQALS
SAEETFVIELLLAAVRQAAEGPPLPGRGTGKKVISAKEKKLQNDDCTKLTEHFIKVLSEL
LSKYSEEAEKLTSILRIPQYFQTDTWDREHSQSMQALLVELDSAVRRHTDAGLLETAARS
YQSLCAQDSPWHSLARPTFDRLIQCWTQTLGTRLGESLTDDCFTGSGDNTVEILSTLKKL
TVFNNAQDLSKWSIYELVTKLVEVEIKHGGLPMELAIEALRCMCSCILWKLNTFGEAVAS
RESALQQRNQLRAFCEKCHRCLSHVEQLVREQAYMCLSDVLIAHNFQLQTWDASAGTPLL
YTPDPKLQKALLSFVLEHVFTSPELDTHSSKVGESECREGRLEDLHRRRNLLAAYCKLII
HGVLEMSTAAEVFKQYVKYYNDFGDIIKETLNRTRQMDKIESARTLMLCLQQLYLRLKQE
QDRGNTCSSRIQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFKGFIQQSEK
HSPPYISYLTILSEFSSKLLKPDKKTVYSYLQRFAGEQVINNREESWMPLIYYKASLMGT
AEGEDAISFISSDTNKQPSLTNRSRSPSMNQVNTEDQRFLSPSIEPKGNMLLKSPEESKV
QHALLTRDQMTSSLISDKGPRNSDEVDVDTVDIDVL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaaccaactctactgtccagatcggtgcaaaaagagaactccatagtcgac
atctcttcctgtgcatctgtgcatcacctctcaagtgagataaatgagaacagacagaag
actgtgagaggaaagaggaaagccagggaatgctctgagaatgtcaaatgtaagcgttca
aagagcagtagtggcagtctgggaagagcagaggaggaacagctcaaaaatggagacgtg
gaggccgttactctgtttgaggtggtcagcatgggcaggaatgcaatgcaggccgtggtg
gatgactggattgatgcatatgccgtagacagagacgcagcactgctggatctcatcagc
ttctttattcagtgttcaggatgcaaagggatggttactgctgagatgtttcagagcaaa
cagggtactgacgtcatgagtaaaatggtggaggatctggatgaggacacaggtttacaa
tacaagaagttccttgcgtttccatggattttaactgtcacgtggcctctagacatggac
agtggagagtatccactaataatgcccggtctgtactggaagaggtttcgtacacatttc
tgtgagtttgtatcggtgctagtggcccagtgtcagaactgtgtcatctttgacggctac
ctcttgaacacactcatttcgctgctgacagagctctcagattccagagttcgtgctttc
agacacacctgtacactggcagcagtgaagcttctcagtgctctggtaaatgtggctctc
aacctcagtgtcagcatcgataatagtcagcggctatatgaagtcgagctgcccaagacc
cccagcaaacgggcatctcctaggctggaaaggatccagagaaagatcagtgagttacag
gacaggaaatttgaaatcgagaacatggtggatgccattttcaaagcagtcttcctgaag
agatacagagatgtgattcctgaaatcagggccatctgtatggaagaactgacagtgtgg
atgaagctttatagttcagtgtttctgaacgacagctacttgaagtacgttggatggatg
atgcatgacaagcaacctgatgtgcgtctgaaatgtgtgctgggtctacagggactttat
caggatcaaataagtcccaaaatggaccttttcacaattcggtttaaggagcggatgatc
tccatgacactggataaagaccatgaagtggcaatacaggccgtgagattgctcatggtc
atctcccaatcctgtgaggattttctaagtcctgatgactataagcaggtgttccagttt
gtgtactgctcccacagacctcttgctagcacagcgggtgaattcctctacaataggctg
ctgagtaaccctgaattatcaaggcccagagatgctgcctctgaacaggacaggcacaga
gagctaatgttagccagagtccgagcccttatccgtttccacacagagagtgagctgcac
cagcatgtgctgtacctcgtggacagtttgtgggacagtgcagcagctctgctgaaagac
tggaacggtctcacatcactgctcttacctcagacttcctgtcaggaacaagctctgagc
agtgctgaggagacctttgtgattgagctcttgttggcggcagtgagacaggctgcagag
gggcctccgttaccagggagaggaacaggtaaaaaggtgataagtgctaaagagaaaaag
ctacaaaatgatgactgcacaaaactcactgaacatttcattaaagtgctatctgagctt
ttatcgaagtactcagaggaagctgaaaaactaacttccatcctaagaatacctcagtat
ttccaaacagacacctgggatcgtgaacactcacagtccatgcaggccttgctagttgag
ctggactctgcagtgcgtagacacacagacgcagggctgctggagacagctgctcgttct
taccagagcctctgtgctcaggattcaccctggcactccttggcccgccccacctttgac
cggctcatccagtgctggacacaaacactggggacacggttaggagaatcactgactgat
gattgtttcactggaagcggggacaacactgtggaaattctgtccacactgaagaaactt
actgtgttcaacaatgctcaggatctgtctaaatggagcatctatgagctagtgaccaaa
cttgtggaggtggagataaaacatggtggtctgcccatggagttagcaattgaggctctg
cgctgtatgtgtagctgcatcctgtggaagctcaacacgtttggagaagctgtggcctcc
agggagtcagccctccagcagagaaaccagctacgtgccttctgtgagaaatgtcaccgc
tgtctctcacacgttgagcagctcgtaagagagcaagcctacatgtgtctgagtgacgtt
ctcatagctcataatttccagcttcagacgtgggatgcttctgcaggcactccgctgctg
tacacccctgatcccaaactccagaaagctctactctcctttgtcttggagcatgtcttc
accagccctgagctggacacccacagcagtaaagtcggtgagagtgagtgtagagagggt
cggctggaagacttgcacaggcggagaaatcttctggctgcgtactgcaagctaataata
catggtgtgttagagatgagcacggctgctgaggttttcaagcagtatgtgaagtactac
aatgacttcggtgacatcatcaaagagaccctgaacaggacacggcagatggacaagatc
gaaagcgctcgcacactgatgctgtgccttcagcagctgtacctgaggctaaagcaggag
caggacagagggaacacatgcagctccaggattcagacctacagcagcatcaaagagctg
gccagacgcttctccctcacgttcggctgggaccagatcaaatcccgcgagtccttagcc
atgatccacagggatggcattgagtttgttttcaaaggattcattcagcagtctgagaaa
cactcaccaccgtacatctcatacctcaccatcctcagcgaattttccagcaagctgctc
aaacctgacaaaaagacagtctacagttatttgcagaggtttgctggtgagcaggtcatt
aacaatagagaggagagctggatgccacttatttactacaaagcatctctgatgggcacg
gctgagggagaagatgccatctcctttatcagctctgacaccaacaaacagccatccctc
accaatcgctccagatcaccatccatgaatcaagtaaacactgaagatcaaagatttctt
tcaccctctatagaaccaaagggaaacatgcttctaaaaagtcctgaagaatcaaaggtc
caacatgccctactgaccagagaccagatgaccagcagtctcatatctgataaaggtcca
aggaacagcgatgaagtggatgttgacactgtagatatagatgtcttataa
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