Myxocyprinus asiaticus (Chinese sucker): 127448060
Help
Entry
127448060 CDS
T08782
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127448060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127448060
Spliceosome [BR:
masi03041
]
Complex A
U1 snRNP components
U1 related factors
127448060
Complex B
127448060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
127448060
NCBI-ProteinID:
XP_051566288
LinkDB
All DBs
Position
11:7745343..7812137
Genome browser
AA seq
888 aa
AA seq
DB search
MQKTHIGWHVRSSTDANSGSSHAAPFPGVPPSGIPPPFMGPPGIPPHFPPMGMPPMGQRP
PSMAPMPPGIMPPMMPPMGAPPMGQMPAMIPPMMPGMMMPPRMPAASIQPTGPPGVGPVE
SAAPTAPGAAITTSTESSTDEQTKKKSMWTEHKSLDGKTYYYNTETKQSTWEKPDELKSP
AEQMLSKCPWKEYKSDTGKPYYYNSQSKESRWTKPKELEDLEAMIKAEENGTADVVAPGT
TPALTVQSEASVAMAAVAEIEATMVTGTTEEQPSHVPAQAAEVSSDVTVNSTEETPRVET
QPSNDISEEKRPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLIINDPRYS
ALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQM
FGDQEVWSCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTT
WSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEDEKQKTLLRERRRQRK
NRESFQKFLDELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLLKFYVEDLK
ARYHDEKRIIKDILKDKGFLVEINTCFEDFGSVISSDKRATTLDAGNIKLAFNSLLEKAE
AREREREKEEARKMKRKEAAFKSMLKQATPPLEPDATWEGVRERFLKETAFEDVTLESER
KRIFKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDYHSKKKKCSTS
KSASEHSSSGESERSYKKSKKHKKKGKKRRHKSASPESDGEKERKGREKEKDIENDKSRG
KTRGESKQKSPKRKSAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacacacattggatggcatgtaaggtcctcgactgatgctaatagtggctcc
agtcatgctgcaccttttcctggtgttccaccttcaggaattcccccgccttttatggga
ccaccaggaatcccgcctcacttccctccgatgggaatgccacccatgggccagaggcca
ccgagtatggctcctatgcccccgggaatcatgccccccatgatgcccccaatgggagca
ccacctatgggacagatgccagccatgataccaccaatgatgccagggatgatgatgcca
ccccgtatgcccgctgcatccattcaacctacaggaccgcctggcgtgggtccagtagag
tctgctgctccaactgctcctggagctgcaatcaccacatcgactgagtcgtcaactgat
gaacagacaaaaaagaagtcaatgtggaccgagcacaaatcactagatggaaaaacgtac
tactacaatacagagaccaaacaatccacctgggagaaacccgatgagctcaaatctcct
gcagagcaaatgttgtccaagtgcccttggaaggagtataagtcagacacagggaaaccc
tattactacaactcacagagcaaagagtctcgctggactaaacccaaagaactggaggat
ctggaggcaatgataaaggcagaggaaaatgggacggctgatgtcgtggcaccgggcacc
actcctgcccttacagttcagagcgaggcttctgttgccatggctgcagttgctgagata
gaggctaccatggtgacaggcaccacagaggagcagccgtctcacgtgcctgctcaggct
gctgaggtcagcagtgatgtcactgtgaattccactgaggaaacgcccagagtagagaca
caacccagtaatgatatatctgaggagaagagaccagagctggtgaagaaagtttacaaa
tggaacacaaaagaggaggcgaagcaggcatttaaagaactgctgaaagaaaagggcgtt
tcctccaatgcatcttgggagcaggcgatgaagctgatcattaacgaccctcgatacagc
gccctgcccaagctgagtgaaaagaaacaggcgttcaatgcttataaagtccagacagag
aaagaggaaaaggaagaagccagaatcaagtacaaggaatctaaagagacgttccagcgc
ttcttggagaaccatgagaagatgacttcaaccaccagatacaagaaagcagagcagatg
tttggtgatcaggaggtttggtcgtgtgttccagagagggacagactggagatctatgag
gacgtgctcttttatctggccaagaaagagaaggaacaagcaaagcagctgaggaagagg
aactgggaggcgctgaagaacatactggacaatatggccaatgtgacgtacagaaccacc
tggtctgaagctcagcagtacctgctggacaaccccaccttcgctgaggacgaggagctg
cagaacatggataaggaggatgccctgatctgttttgaggaacacatccgtgcactagag
aaagaggaggaggacgagaagcagaaaactctgctgcgagagagacgcaggcagcgcaaa
aacagagagtccttccagaaattcctggatgagcttcatgatcatgggcagctgcactcc
atgtctgcctggatggagatgtatccgactgtcagcgctgatatccgcttcaacaatatg
ctgggccagccaggctccactcctctggacttattaaagttttatgtggaggatctgaaa
gctcgttaccatgacgagaagaggatcattaaagacatcctgaaggataagggcttcctg
gtggagatcaacacatgctttgaggacttcggctcagtgatcagctctgataaacgtgcc
accactctggatgcaggaaacatcaaactggcctttaacagcttgctagagaaggcagaa
gcgcgtgaaagagagagggagaaagaagaggcgaggaagatgaagaggaaggaggcggca
tttaagagcatgctgaaacaggccacgccccctctggaacctgatgccacatgggaggga
gtgcgagagcggttcctgaaagagacggcgtttgaggacgtcacactggagtcggagagg
aagaggatattcaaagactttatgcatgttctagagcatgagtgtcagcatcatcactcc
aaaactaaaaaacactcaaagaaatccaagaaacaccacagaaaacgctccagatctcga
tccggttcagagtctgaggacgatgactatcactcgaagaagaagaaatgttcgacgtct
aaatctgcgtccgagcactcgtcctccggagaatccgagagaagttacaagaaatctaag
aagcacaagaagaaggggaagaagaggagacacaaatcagcctctcctgagtctgatgga
gagaaagagcggaagggaagagagaaagagaaggatatagagaatgacaaatccagaggg
aaaacacgtggagaatccaaacagaaatcccccaaaagaaagagtgctaaagaagagggt
ggatgggatacatcaggtagtgaactgagtgaaggagagttggagaagaggagacgcact
cttttagaacagctcgacgcaccataa
DBGET
integrated database retrieval system
