Myxocyprinus asiaticus (Chinese sucker): 127448185
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Entry
127448185 CDS
T08782
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04382
Cornified envelope formation
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127448185
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127448185
09142 Cell motility
04820 Cytoskeleton in muscle cells
127448185
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127448185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127448185
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127448185
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127448185
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127448185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127448185
NCBI-ProteinID:
XP_051566491
LinkDB
All DBs
Position
11:complement(13208480..13354290)
Genome browser
AA seq
1725 aa
AA seq
DB search
MSDRGPGYGVSENRQERFFHSLLPLSLCRSVLAFPSLFFVAFPSPCLPPRSEKAGKTCRQ
EGGVFVMPGAPRPERKEGGVWQGGGRGRAMMTHARPLRRQFGRDRATGSCPGMPGPLGSQ
GLTGPQGRLGDPGLQGPKGEKGDHGKGGVMGPKGSVGMEGVPGFSGADGVPGHPGPSGPR
GKPGADGCNGTRGDSGTPGIPGFEGAPGISGHKGLKGEKGDPLELWVYMERFRGDPGQPG
LEGLIGPTGNPGGRGLPGGLGLWGPPGIKGLKGQKGESTRIIKGVKGESGDVGETGQPGP
FPHTRPPPADWQGQKGERGYKGEPGDVEPMSVKGEDGVTGFMGLQGSPGFNGWPGPRGDN
GLPGFPGNTGPKGDRGEPGELIFTERPFYNAEVGPPGPPGERGPIGNRGPMGAKGLSGPP
GPPASEQTGTFVLWGPEGPRGTKGKKGEAGEPGTPATQPGPPGFDGQPGVRGPPGPKGSV
EDYFKGAPGPRGRPGNAGKKGPKGDHGLCECQIKSSPPGAPGPFGELGDSGMAGEWGQQG
DQGDPGPRGNDGVPGFPGARGEPGPKGRKGELTAATVKGLTGDPGDPGASGFQGEQGSPG
RNGENGAPGLQGHVGEGPVGEPGEKGYPGRPGLPGLTGPAGEPGQVLGATKGTKGLPGDE
GRIGIDGNPGLPGASGACSTEEEWNIAGECFRVPGPPGETGLPGIPGLDGFNGVPGPKGL
PGLSGEHGTKGEQGEPGRGGPPGPMGSVGFRGDYGHPGSKGEEGPPGLSGKPGLDGALGV
KGEHGEVLGASTGAPGEPGLPGQRGAIGLPGDPGPKGHSGMEGMPGMIGLKGESGPPGLQ
GEIGRPGPEGTFGYSGRPGHTGSPGPPGNIGQPGPSGVRGDQGDPGPPGSWGFKGVIGDP
GNVGVPGNIGLPGDPGQQGPFGHRGLQGLKGLKGGQGMTGFPGKTGQEGIKGFAGLQGET
GSPGQQGAKGETGSPGQKGDRGLMGPPGEKPIIHITPHMKEVMKGAKGDHGNMGDPGFTG
PRGQKGFPGFPGKEGEHGHPGEPSDKKGSPGLPGEKGYQGPKGMPGSTGLPGIEGFPGMS
GPRGDKGSPGAYGRSGDPGIKGIRGDLGPTINLPGSTGLRGETGFPGTSGEKGLAGQPGD
RGSPGFDGIEGMKGYSGEPGKAGPPGSDGLQGFPGNQGHKGWPGESGQPGTPGIQGQPGQ
KGFPGLKGIFGLDGLKGQKGIQGVPGSDYSGPPGDPGTKGEIGETGIPSTEVGLPGALGL
KGSLGDPGAKGTSGHPGEQGPPGPQGFSDTQGVSGDPGFPGSKGLPGFPGPRGIPGDLSP
FGVKGEKGNPGVFGLSGEKGVQGDRGERGLAGEPGVSGRRGEKGEPGMMGFPGRHGFQGN
MGPVGPKGDTGPPGFPGSPGAKGLPPVPEKLPGERGPPGSMGIQGPQGHNGNIGPAGPPG
DPGFLGPKGQKGMPGLPGIPGNPGFRGESGQRGHPGLQGEEGNRGQSGLTGPAGMPGRSV
SVGYLLVKHSQSDQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFNTMPF
LYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEESEIKPYISRCSVCEAPSVAIAVHSQD
ITIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAKGTCH
YFANKQSFWLTSIDQSFQSSPASETLKAGQLLSRISRCQVCMKNL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccgaggaccaggctacggcgtatcagagaaccggcaagaacgtttttttcac
tctctcctccctctctccctctgtcgctctgtgttggcctttccctctcttttttttgtt
gcttttccctccccttgtctccctcccaggtccgagaaggcggggaagacctgccggcag
gaggggggggtgttcgttatgccaggggctccccggcctgaaagaaaggagggaggagtg
tggcaaggaggagggcggggccgggccatgatgacacatgcccggcccctaaggcggcag
ttcgggagagatagagctacaggcagctgccctggtatgcctggtcccctaggttcccag
ggcctcacaggccctcaagggcgcctaggagacccaggcctccagggccctaagggagag
aaaggagaccatggcaaaggaggtgttatgggtccaaaaggaagtgtgggtatggaggga
gttccagggttttctggagcagatggtgttccgggtcacccggggccatctggtcctcgt
ggaaaacctggagctgacggctgtaatggaactcgaggagactctggaacgccaggcatt
ccaggattcgaaggcgcccctggaatatcaggccacaaaggactgaagggggagaagggt
gacccgttggagctgtgggtctatatggaaagatttaggggagatccaggacagccaggc
cttgaaggattaattggaccaactggaaacccaggtggcagaggactgccaggaggacta
ggtctatggggtccccctggtattaaaggcttgaaaggacaaaagggtgaaagcactagg
ataataaaaggagtcaaaggagaatcgggggatgttggagagacaggccaaccaggacct
ttcccacacaccagaccaccccctgcagattggcagggtcaaaaaggcgagagaggatat
aaaggagaaccaggagatgtggaacctatgtcagtcaaaggagaggatggtgttactggg
tttatgggactgcagggaagcccaggatttaatggctggcccggacctaggggtgacaat
ggactaccaggtttcccaggaaatactggccccaagggggacagaggagaacccggagag
ctgatattcacagaacgtccattttacaatgccgaggtgggtcctccaggacctccagga
gagcgtggcccaataggaaatcgtggtcctatgggtgctaaaggactgtcaggtccccca
ggcccccctgcttctgaacaaacagggacatttgttctgtggggcccagagggaccaaga
ggaacaaagggaaagaaaggcgaagctggagaacctggtacacctgccactcagcccggc
ccacctggctttgatgggcagcctggagtccgtggaccacctggacccaagggatcagtg
gaagactatttcaaaggtgcaccaggaccccgtggacgtccagggaatgctgggaaaaag
ggaccaaagggtgaccatgggctttgtgaatgccagatcaaatcttctccgcctggtgct
ccgggcccctttggtgagcttggtgactctggcatggcgggcgagtggggtcagcagggt
gatcaaggtgacccaggacccagaggcaatgatggtgtacctggttttcctggtgctcga
ggggagcctggacccaaggggagaaaaggagagttgaccgcagctacagtgaaaggatta
acaggtgacccaggggacccaggtgctagtggtttccaaggagagcaggggagtcctggg
cgtaatggagaaaatggtgcacctggtctgcaaggacatgttggagaaggtccagtaggg
gagcctggagagaagggctacccgggacggccgggtctcccaggtttaacaggcccagct
ggggaacctggtcaagttctcggagcaaccaaaggtacaaagggccttcctggagatgaa
ggaagaattggtattgatggaaatccagggttgcctggcgcttcaggggcctgtagcaca
gaagaggagtggaatattgcaggtgagtgttttagagtccctgggcctccaggagaaaca
gggctgcctggcattcctgggttggatggatttaatggagttccaggtcccaaaggatta
ccaggtctttctggagaacatgggaccaaaggagagcaaggtgaaccaggaagaggaggt
cctcctggaccgatgggttcagttggatttcgaggggactatggacatcctggctccaaa
ggtgaagaaggacctccaggcctctctgggaagccaggtttggatggtgctttaggggtg
aagggtgaacatggtgaagttctaggggcatctactggagcccctggagaaccgggactg
ccaggacagaggggtgctattggccttccaggagacccaggcccaaaaggacactcaggt
atggagggaatgcctggtatgatcggcctcaagggtgaaagtggccctccaggtcttcag
ggagaaataggaagacctggacctgaagggacatttggatattctggacggcctgggcac
acaggatctcctggtccacctggaaatattggacaaccaggtccaagtggagtaagggga
gatcaaggtgaccctggtcctcctgggtcctggggatttaagggtgtcattggagaccct
ggaaatgttggtgtgccaggaaatattgggctaccaggagatcctggacaacaggggcct
ttcggtcaccgtggtctccaagggctcaaaggtctcaaaggaggtcagggcatgacaggc
ttccctggaaagactggtcaggaaggtataaaaggatttgcaggactgcaaggagagaca
ggctccccaggacaacaaggtgcaaaaggggaaactggctctccaggtcaaaaaggtgac
agagggctgatggggcctccgggagaaaaaccaatcatacatataacacctcatatgaaa
gaagtcatgaagggggctaaaggtgaccatggaaatatgggagatcctggcttcactggt
cccagaggccaaaaaggttttccaggttttccaggaaaagagggggaacacggacatcca
ggggagcccagtgataaaaaaggttctcctggtcttccaggagaaaaaggatatcaaggg
ccaaagggaatgccaggctctacaggactccctggaatagagggtttccctggaatgtct
ggacccaggggtgacaaaggctcacctggtgcctatggacgatcaggagaccctggaatc
aaaggaatcagaggtgacttgggtccaaccatcaaccttccgggatcaacaggactgaga
ggtgaaactgggttccctggaacttcaggtgaaaagggtctggcaggtcaacctggagat
agaggaagccctggttttgatggcattgaggggatgaaaggctactcaggtgaacctgga
aaggcaggaccaccaggctccgatggccttcagggtttccctggaaaccagggtcataag
ggctggccaggagaatcaggacagccaggaacccctggaatccaaggccaaccaggacaa
aaaggatttcctggtctaaaaggcatttttggattggatggcctgaaaggtcaaaagggg
atacagggggttccaggttctgactactcaggtcctccaggtgaccctggaacaaaagga
gagataggagagaccggtatccccagcacagaggttggcctcccgggagctttgggcctc
aagggttcccttggagatcctggtgctaagggtacatctgggcatccaggtgaacaaggg
cctccaggtccacaaggattctctgatacacaaggagtgtcaggtgaccctggctttcct
ggcagtaaagggcttccaggctttcctggacccagagggatcccaggtgatctgtctcca
ttcggagtgaaaggagagaaaggaaacccaggggtatttggactcagtggagaaaaggga
gtccagggggacagaggagaaagaggactggcaggagaacctggagtgtcaggaagaaga
ggtgaaaaaggagaaccaggaatgatgggatttccaggaagacatggttttcaaggcaac
atgggccctgttggacctaaaggagatactggacccccaggttttcctggctcacctggt
gctaaaggactcccacctgtcccagaaaaattaccaggggaaagaggaccaccaggttca
atgggtattcaaggaccacagggacataatggaaacataggccctgctggacctccaggt
gatccagggtttttgggtccaaagggccagaagggcatgccaggtctcccaggaataccg
ggaaatccaggcttccgtggtgaatctggacaaaggggccaccctggtctgcaaggcgag
gaaggtaaccgagggcaatctggattaactggtcctgctggaatgcctggccgcagtgtc
agtgtcggttaccttctggtaaaacacagtcagtctgatcagatcccaatgtgccctgtg
ggtatgtccaagttatgggatggttacagtcttctgtactttgagggacaagaaaaggcc
cacaaccaagacctgggtctagctggatcatgtcttcctcgttttaacaccatgcccttc
ctatactgcaatcctggtgacatatgctactatgctagtcgaaatgataaatcctattgg
ctgtccaccaccgcaccaattcctatgatgcctgtggaggagtctgagataaagccatac
atcagtcgttgttctgtgtgtgaagctccatctgtggccattgcagttcacagtcaagat
ataaccatcccacaatgtcctgccgggtggagaagtttgtggattggctattccttcctt
atgcacacagcggctggagatgagggtggcggtcaatctctggtgtctccaggctcttgt
cttgaagatttccgcacaactcccttcatcgagtgtaatggggccaagggtacatgtcac
tactttgccaacaagcagagtttctggttgacatctattgatcagtccttccagagttcc
cctgcctctgagacactcaaagccggtcagctcctgtcacgcatcagccgctgccaagtg
tgtatgaagaacctgtga
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