Myxocyprinus asiaticus (Chinese sucker): 127448186
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Entry
127448186 CDS
T08782
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127448186
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127448186
09142 Cell motility
04820 Cytoskeleton in muscle cells
127448186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127448186
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127448186
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127448186
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127448186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127448186
NCBI-ProteinID:
XP_051566493
LinkDB
All DBs
Position
11:13354392..13442823
Genome browser
AA seq
1641 aa
AA seq
DB search
MRLSCGTLFLLTVSLSIGKSKAKGVGCSGSSCGGCDCSGVKGAKGERGFPGLTGVVGFPG
LQGHEGPLGPIGPKGDAGEPGAPGMKGTRGPPGVAGFPGHPGIPGIPGQEGPPGPPGIPG
CNGTKGERGFDGIPGLPGLQGPPGIPGLQGMKGDPGGFTDVIIPQKGDRGFPGQPGSTGP
PGNPGLPGPIGPPGPVGPSGRPGDPGQKGEPGDRLSFVAEKGQKGERGLTGPPGPPGRRE
EFEGTGTTTYFPGPPGERGSKGEKGDKGFCVPHQHGIKGEHGPPGPKGKPGKDGQNGEKG
ERGFPGSPGLEGLKGDKGERGPPGYGNVLPGVPGPPGLPGAEGERGYPGERGDPGPPGRN
IQGPPGPPGFPGEIGQKGDKGSNGLPLRGLDGADGPPGPPGAPGEIDINCDIAKGAPGPP
GPQGLQGEVGQKGDQGETCTECTASGPPGLPGPQGPKGQQGFPGAAGSKGEKGVPGPIGP
AGNPGQDGSPGLMGAPGVHGEPGDIFVAPGLKGDKGIPGTTGNRGSPGVNGLPGKDGRPG
QPGPKGEPAREGIKGDRGQDGDPGITGPPGERGPPGLAGIGRPGEPGEKGTAGFPGAPGR
PGQPGIKGEAGKIIHLPGPHGAPGPRGETGRPGLQGERGLPGERGVTGFPGKKGDPGLPG
IGLPGPPGPKGYSGIPGPAGLPGEPGQTGQDGYPGRAGTPGQKGEPGRGLPGPKGSIGQP
GLPGFTGEKGNPGMTGVPGAEGRTGPPGPQGIKGDPGPPGVHGLMGPPGPPGLGEPGPRG
PMGPPGGPGPLGQTGIKGEKGYQGLPGLDMPGPHGDKGSPGVPGLPGSKGLPGQPGLPGK
DGFPGERGPKGEIGLMGMTGPPGSPGSFGNPGAPGPRGDPGVTGPRGQFGEPGPKGERGE
QGLQGPPGNMSDVDMEHMKGDKGDIGDRGDPGLTGEKGYAGTPGDPGMPGKDGMPGLPGQ
PGDKGDPGIPGVPGHIGEPGDTGPRGDMGYPGSMGPKGTKGVGGSPGHPGFKGVDGSKGE
KGDPGLAGIGIPGPPGEKGNIGTPGFPGEPGHKGQKGTMGIPGTPGSQGPKGDPGLIGYP
GNPGKPGEKGVSGLPGSPGDPGFQGRPGEPGLQGPPGPLGEKGEQGVDGIPGLTGERGEP
GVPGKGSPGIHGQPGSKGDKGNPGLPGIPGSPGIPGSKGEKGLPGFPGDQGWPGERGLPG
ASMEGPKGDRGAYGAPGEKGATGDPGPPGVPGSAGAKGEKGDVGFPGPQGSQGYKGDKGF
TGIPGEPGLPGYNGPKGEMGPQGVPGFPGIKGEQGVLGPKGEGGDRGFPGLKGKEGPPGP
PGPHTFVKGDPGFPGPQGPQGPVGLQGFPGPKGTQGVMGPQGLKGADGTPGYNGHPGAKG
EPGQTGPSGPRGYPGPPGPDGVPGHIGPPGPSSMDHGFLVTRHSQTVEVPQCPEGTSLIY
DGYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEP
MPMSMAPVTGQSIKPFISRCAVCEAPAMVIAVHSQTIQIPSCPQGWDSLWIGYSFIMHTS
AGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSEMFMKPVPT
TLKAGNLRTHISRCQVCMKRV
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcggctttcgtgtggcactctttttcttctgacagtctctttgagcataggcaagagc
aaagctaagggtgtagggtgttctggatcttcatgtggaggatgtgactgcagtggtgtg
aaaggggcaaagggggagagggggttccctggtttgactggtgttgttggattccctgga
ttacaaggtcatgagggccccctggggccaataggaccaaagggagatgcaggagagcca
ggagctccaggaatgaaaggaaccagaggcccacctggtgtggctggtttcccaggacat
ccaggtattccaggtattccaggacaagaaggcccacctggacctccaggaatcccaggc
tgcaatggaacgaagggggagcggggttttgacggcattccaggccttcctggactgcag
ggaccaccaggtattccaggtttgcagggaatgaagggagacccaggtggttttactgat
gtaatcatccctcagaaaggagacaggggcttcccaggacaaccaggttcaacaggacca
ccaggaaatccaggactaccagggccaattggcccacctggaccagtaggaccttctgga
agacctggtgatcctggccaaaagggagagccgggtgacaggctgtcatttgttgcggag
aaaggacaaaagggagaaagaggtttaacaggtcctcccggtccacctggtagacgagag
gagtttgaaggcactggcacaacaacttattttcctggaccaccgggtgagcgaggctca
aaaggagagaaaggagacaagggtttctgtgtaccacatcaacatggaatcaaaggtgaa
catggaccgcctggaccaaaggggaaaccaggaaaagatggacagaatggagaaaagggg
gaaaggggtttccctggtagtcctgggcttgaaggcttgaagggtgacaaaggagaaaga
ggaccaccaggatatggaaatgttcttccgggggttcctggtcctcctggccttcctgga
gcagaaggagagagaggttaccctggggagcgtggtgatcctggtcctccaggaagaaat
attcagggccctcctggacctcctggcttccctggagagattggccaaaagggagataaa
ggatctaatggactgcctcttagaggacttgatggagctgatggaccacctggaccaccc
ggggctccaggagaaattgatataaactgtgatattgcaaaaggagctccaggcccccct
ggacctcaagggttgcaaggagaggtgggacagaaaggtgatcaaggcgaaacatgtact
gagtgcactgcttccgggcctccagggttgcctggtccccaggggccaaagggtcaacaa
ggttttcctggagcagcagggagtaaaggagagaagggtgtgccaggacctattgggcct
gctggaaatccgggtcaggatggctctccaggtttaatgggtgcccctggtgttcatggt
gagcctggtgatatatttgtggcaccagggctgaaaggagacaaggggataccaggcact
actggtaacagaggatctccaggtgttaatgggctcccaggaaaagatggccgacctggg
caacctggacccaaaggagagcctgctagagaaggtattaagggggaccgtggccaggat
ggagatcctgggataactggcccgcctggtgagagaggtcccccaggtcttgcagggata
ggtcgtcctggtgaacctggtgaaaaaggcactgcagggtttcctggtgcaccaggaagg
ccaggacaaccaggaattaaaggtgaagctggtaaaattatacatttacctggacctcac
ggtgcaccagggcctcgtggagagactggcagacctggtcttcaaggtgaaagaggtctt
ccgggtgaacgtggagttacaggattcccaggaaaaaaaggtgaccctggactgccaggc
attggacttcctgggcccccagggccaaaagggtactctgggattccaggtcctgctggc
cttccaggagagcctggtcaaactggccaggatggctaccctggtcgtgcagggacacct
gggcaaaaaggtgaacctggcaggggtcttcctggtcctaagggctccataggccagcca
ggattgccaggatttacaggggagaagggcaatcctggaatgacaggggttcctggagca
gagggacgtacagggcctcccgggcctcagggaattaaaggtgaccccggacctccagga
gttcatggtttgatggggccaccaggtcctccagggcttggagaacctggaccacgtgga
ccaatggggccacctggaggccctggacctcttggtcagacaggtataaaaggagagaag
ggttatcaaggactacctggtctggacatgccaggtcctcatggagacaagggtagccct
ggtgtcccagggctaccaggatctaaggggttgcctggtcaaccaggacttcctggaaaa
gatggcttccctggtgagcgtggtccaaaaggagaaattgggctcatggggatgacagga
cctcctggatcgccaggttcctttggaaaccctggggcacctggaccaagaggtgaccct
ggtgtgactgggcccaggggacagtttggtgaaccaggtccaaagggtgaaagaggggag
cagggtctacaggggccacctggaaacatgagtgatgtggacatggagcacatgaaaggg
gataaaggagatattggagacagaggtgatcctggtcttacaggagaaaagggctatgct
ggaacacctggcgaccctggaatgcctggaaaggacggaatgcctggattacctggacag
ccaggtgataaaggtgaccctggaattcctggggtgccaggacatattggagagcctgga
gacacaggtccaagaggagacatgggatatccaggttcaatggggccaaaaggcactaaa
ggtgtcggcgggtcaccgggccaccctggatttaagggtgttgatggctccaaaggagaa
aaaggagaccctggactggcaggaataggaatccccggtccccctggagagaagggaaat
ataggcacccctggtttccctggtgaacctggacataagggacagaaaggtaccatggga
attccaggtactcctggaagtcaaggacctaaaggagacccgggacttattggttaccca
ggcaatccagggaagccaggtgagaaaggtgtcagtggattgcctgggtctccaggagac
cctgggtttcaaggacgtcccggtgagcctggtctacagggtcctccaggtccacttggt
gaaaaaggtgaacaaggagtagatggcatacctggattaactggagagaggggagaacct
ggtgtaccagggaaaggatcacccggaatccacggtcaacctggcagcaaaggtgacaaa
ggaaaccctggtcttcctggcattcccggcagtccaggtattcctggaagcaaaggagag
aagggactgcctggattcccaggggaccaaggatggcctggagagagaggacttccagga
gcatctatggaggggcctaaaggggacaggggagcttatggggcgccaggagaaaaaggt
gcaactggtgatccaggcccacctggtgtaccaggcagtgctggagctaaaggagaaaaa
ggagatgtgggcttccctggcccacaaggctctcagggttataaaggagacaagggtttc
actggcatccctggtgaacctggattgcctggctataatggaccaaagggtgagatggga
cctcagggtgttcctggtttccctggtataaagggtgagcaaggagttcttggtcctaag
ggtgagggtggggacagaggattcccagggctaaaaggtaaggaaggcccccctgggccc
cccggaccacacacattcgtgaagggagatcctggttttccaggaccacaaggtccgcaa
ggtccagttggactccaaggtttccctggaccgaaaggaacacagggtgtgatgggacct
caaggtttaaaaggagctgatgggacacctggatataatggacatcctggggccaaagga
gagccaggacaaactggaccctctggcccaagagggtaccctggacctccagggcctgat
ggtgtcccaggacatattggccctcctggcccttcttcaatggaccatggcttcctggtt
acccgccacagtcagactgttgaagttccacagtgtccagagggaacctcactgatctat
gatggatactccctgctttatgttcagggcaatgagcgatcacatgggcaagacttaggt
acagctggtagctgtctaaggaagttcagccctatgcctttcctcttctgcaacatcaac
aatgtatgtaactttgcatctcgtaatgactactcctactggctcacgtctcctgagccc
atgcctatgagcatggcccctgttaccggtcaaagcatcaaacccttcatcagcagatgt
gcagtatgtgaggctcccgctatggtgatagctgtgcacagtcagaccatacagattcca
tcctgccctcagggttgggattccctctggattggatactcttttatcatgcacaccagc
gctggtgctgagggttcaggtcaggctctggcctctcctggttcttgtctggaggagttc
cgctctgctcccttcatcgagtgtcatggtcgtggcacctgcaactactacgccaattcc
tacagcttctggttagccaccatagaggatagcgagatgtttatgaaacctgtcccaaca
acactaaaggctgggaatctgcgaactcacatcagcaggtgtcaagtgtgcatgaagagg
gtatag
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integrated database retrieval system