Myxocyprinus asiaticus (Chinese sucker): 127448216
Help
Entry
127448216 CDS
T08782
Name
(RefSeq) collagen alpha-3(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04518
Integrin signaling
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127448216
04518 Integrin signaling
127448216
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127448216
09142 Cell motility
04820 Cytoskeleton in muscle cells
127448216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127448216
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127448216
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127448216
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127448216
Hyaluronan
Extracellular matrix or blood plasma proteins
127448216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
TssR_VWA
VWA_4
OCD_Mu_crystall
Motif
Other DBs
NCBI-GeneID:
127448216
NCBI-ProteinID:
XP_051566550
LinkDB
All DBs
Position
11:complement(24670872..24727211)
Genome browser
AA seq
2910 aa
AA seq
DB search
MVFGLFPKLEAQDAPMPADLVLLIDGSESIGAANFPYIRDLAVRLIDGLAVGKDTIRVAV
ALYGADPEIQFYLNSYNTKENILSAIRGLNYPGGDEANLGAALEKVADSLLGPSTGGRAE
EGVPQVLVVISAGQSTDDVSQGEMAIKQASVFTFGIAVGDSAATAQLEAIATGKSFVLSV
PDVSTVASMGDQILPYINGVAQRRLVIETEITEVLDVGRRDIIFLIDSSMGATFLNAVRE
FIKRFIDTMPIGSDQVQVGVTMFSTTPKTEINLNSFNSKESLISALARIKPKPAVEVNIG
SALDFVRTSMLRADSGTRIQEGVPQLVLLLTSKKSKDSVQQPAEALRQMGVLTLAVGSRA
ADEAELRQIAFDDSVVFMLKDFRALQRNPGDIISPLTTLSGVVVQEGPTETGPFVDVTTV
QTQRVVRDIVFLVDGSSNVGNANLQPVRDFISGVVNRLDVRPERVRIGLMQFAEGQHTEF
YLNTHNTKQDVLSSIAQLQLMGGRASNTGAALQYALANHFQPSAGSRRQQRVQQVLVLIT
GGPSSDEVKKVADRVALAGVLTFAVGAGQVEENYLKTVAFVENLAYYRRNFADLSSVVDQ
IMTPLITVVGETIEPEIEIVSPPSGIERDVAFLIDGSDNVRSDFPYIRAFISKVIEPLEI
GIDKVRVAVVQHSERPSPSFYLNTYQTKEEVLRAVNGLSLAGGRSLNTGAALTFMKNTIL
SPAYGSRSAQNVPQFLIVLTGGRSKDSVREPAVALKTEGVVPFGVGVKNADPKQIEDISH
NPSFAFNVKEFSMLDTVEQKLKTYVSLPKADLNVLLEQAVSQGPKKDVVFVIDGSDGVGM
EFPIIQEFVRRVVEKLNIGENKIRVGVVQYGDSPYADIYLNSHKTKEGVLNGIKELRQRG
GRQRNLGRAIDFVGREVLISGRGGRKQEGIPQFVVVVSGGKATDNIRTSASALKQSGIVP
FSIGTREVDAQELQVISYIPKYAYAVDDLPGLYTVQDTLITTLTELSSEELAKLRPVYPA
ESAPIPTVPRGDKRDVVFLIDGTTKMRSEFPAIRNMIQRVVEKLDVGLDNVRVSVVQYSD
DPKLEFLLNEHFSKEEVRQAIQRIKSKGGNKLNTGQALEYVSKNIYQRSAGSRVEEGVPQ
FLILVTGGKSNDDVSGPANQLKLSNVAPLAVGAHNADAEELKLISFSPELTYTIRDFQQL
PIVEQELLTKVSTMTKTVTSVTPMPRVKLSLGRKDIIFLIDGSDSVGQNGVVHILDFVLK
VVEQLDIQPDQVRVALVQYGERPKTEFSLNSHNNKQSVISAIKRLQHMGGRGADLAEAIK
YVIRNELQASAGVRLAEASQHLVVLTGGRSTSDVSVYGPLLKGSRINCIGIGAENADTKQ
LEQITTTSADVLQVATFPSLPNIQSQFIDRLNRTIVDEPPLEEPRPWLPQAKAADIVFLV
DGSINLGKDNFKEVMEFILNLIDLFFTERDKLQFGLAHYAADVTDVFYLNTNKNKDDIIS
AISRAEYKGGREIKTGNAIRHVQQTHFVKERGSRKDEGIPQILMVITGGRSKDDSKSAAL
ALKATGVRVYAVGVGDIEDEINNLGSEANTVARASTFQELSELNEQILETLDDEVKGIKL
CTGVQDTARACKLDVLVGFDVASQNIFAAQRSLESKMAAILQRITQMQPISCTSGQVPSV
QVGMLAMDSASEPVLLDFTDRYTDLLEPFKALRSRGPFVLNAATIKAYSDRFKTQPSDSI
KVVIHLTDGLDAQYNILKERVEQMRGSGVNSFILVALERVPRFEDAVLLEFGRGFRYTQP
LRVNLMDLDYELQEELDNIAERECCSVPCKCNGQRGDRGAVGVPGLKGQPGGQGLSGHPG
DEGGPGERGPPGVNGTQGFQGCQGQRGFKGSRGYNGEKGEIGEIGLNGINGEEGTTGIAG
PPGDRGNPGERGPKGAKGQAGDVGQTGIRGDPGTPGNDNKQRGPKGDPGDAGPVGEPGVD
GSKGDPGEPGRLGSDGRRGTPGQAGLPGKLGADGLQGEPGVGGSRGPAGPIGAPGIRGED
GNPGPPGPGGQPGPAGEKGRRGAVGRKGEPGEPGPKGVVGPQGPRGESGEDGSDGFGVIG
PKGRKGDEGFPGFPGPKGEAGDPGSKGGPGPRGNNGQRGTSGGIGGPGQKGEIGYPGPYG
QKGPRGPGVVQCDLVKKIRDNCPCCYGAQECPLFPTELAFALDASDGVSRPAFNNMRDTV
LRLVSDITIAESNCPRGARVALALYNNEVTTEIRFADALKKRALIERVQGLQALQTRKQR
SLETAMNFVAQNTFKRVRSGFLVRKVAVFFVNGPVTVTKELSAAALRLYDAGIASVFLLN
REDRQLSRTLQLNNTALAQVIVLPSPGSAEYNNVVKKIMTCHICLDFCAPEQMCDYVPPP
RGRDRRDSTTDLDIDMTFILDSSESTWPSVFTEIKLYMAQMVEQLEMSPEPASSTHHARV
ALVQHAPYEYFHNGSSIPISVAFGLTDHKSAIIVRSFLLDKVHQLEGGRALAAALEGTVE
NVFEKVPHPRHLKVLVLFVTGPVEEDEERIVRAAIEVKCKGYFIVVMAVGKIFSAGDVRV
LAQVASEPSDVFYKRVDGPSGFYDDHIQTFARLLPKYLSLENAFYLSPEVSKKCQWYQSD
QPHKVPFSSPHMHEKHQKHHEQKEVHDIKHKESAEQKILNASEMMGMVSTATLSKPEITE
QKILSASEVMGIVSTAPVNTSEIKSAEQKILTPSEGLGIVSTAPLSNPEIINSLMDPCSL
DFDSGLPCKDYAAKWYFDRKNGFCTQFWFGGCGGNDNRFETEADCLKRCMKIVTEQKASD
EHIKAVLPPAPAPAVALHSSVDICKLPKEEGSCAKFVLKWYYDPLRGNCARFWYGGCGGN
QNRFDTKDECEKGCGKTAPVKQVVIAAVKT
NT seq
8733 nt
NT seq
+upstream
nt +downstream
nt
atggtttttggcctattcccaaaacttgaagctcaggatgcccccatgccagctgacctt
gtactcttaattgatggatcagagagcattggagctgccaacttcccctacatccgtgat
ttggctgtccgattgattgatgggcttgccgtgggcaaggacacaatccgtgtagccgtt
gcgctatatggtgctgatcctgagattcagttctatctcaatagctataacaccaaagag
aacatcctcagtgctatccggggacttaattaccctggcggggatgaggcaaatctgggg
gcagccttggagaaggtggcagacagtctgttgggccccagtacagggggcagggcagag
gaaggggtgccccaggtactggtggtgatcagtgctggacagtccactgatgatgtcagt
cagggtgagatggccataaagcaggccagtgtgttcacctttggcattgctgtgggtgat
tctgccgctactgcccaactggaagctattgctacaggcaaaagctttgttctgtctgtc
cctgatgtcagtacagtggcaagcatgggtgaccagatactgccgtacattaatggcgtt
gcccagcgcaggcttgtgattgaaacagaaatcacagaagttttggatgttgggaggaga
gatataattttcctcattgacagcagtatgggtgccaccttcctcaatgcagtgcgagaa
ttcattaaaagatttattgacaccatgccaatcggctctgatcaggtgcaagtcggagtg
accatgttttccactaccccaaagacggagatcaacctaaactcattcaattcgaaagaa
tccctaatttcggcccttgccagaattaaacccaaacctgcagttgaagtcaacattggt
tctgccctggatttcgtgaggacaagcatgctcagagctgacagtgggacccgcattcaa
gaaggagtgccacagcttgtgttgctactgaccagtaaaaaatccaaagacagtgtccaa
cagccagctgaagcacttcgtcaaatgggtgttctgactttggctgtgggctccagggct
gctgatgaggctgagctcaggcaaatagctttcgatgatagtgtggttttcatgcttaag
gacttcagggcattgcagcgcaaccctggagacattatctctcctcttactacattgtct
ggtgttgttgtgcaagagggtccaactgaaacaggcccctttgtggatgttactacagtc
cagacccaaagagttgtcagagacattgtcttcttggtggatggatccagcaatgttgga
aatgccaacctgcaacctgtgcgggacttcatctctggcgtggtgaacagactagatgta
cgacctgagcgagtgcgcattggcctgatgcagtttgctgagggacagcatacagagttt
tatttgaatactcacaacaccaaacaggacgtgctttcaagcattgctcagctgcaactg
atgggaggacgtgcttcgaacactggtgcagccctacaatatgccctagccaaccacttc
cagccctcagctgggtctcgtaggcagcagagggtccagcaggtactggtgcttataaca
ggaggtccatcttcagatgaagtcaagaaggtcgcagaccgtgtagctttagctggagtt
ttaacttttgctgttggagctggccaagtggaagagaattacctgaaaacagttgctttt
gtagaaaatttggcttactacagaagaaattttgctgacttgtcaagtgttgttgaccag
attatgacaccacttatcactgttgttggggagacaatagaaccagagattgaaatagtt
tcaccaccctctggcattgaaagggatgttgcattcttgattgatggctctgataatgtt
agaagtgacttcccctatatccgtgccttcatttccaaagtcatcgagcctcttgaaata
ggcattgataaagtacgagttgctgtggtccagcatagtgagagaccaagcccaagcttc
tacctgaacacttaccaaaccaaagaagaggtgctcagggctgtaaatggactcagtctg
gctggaggtagaagtctgaatactggtgctgccttgactttcatgaaaaacaccatctta
tcaccagcatatggtagtcgatctgcccaaaatgtcccacagtttttgattgttctgact
ggggggagatcaaaagatagtgtcagggaacctgcagttgccctaaagactgaaggagtt
gtgccttttggtgttggagtaaaaaatgcagacccgaaacagattgaggacatttctcac
aatccatcatttgctttcaatgtgaaggaattcagcatgcttgacacagtggagcaaaag
cttaagacctatgtgagtcttccaaaggcagacctgaatgttcttctagagcaagcagtc
tcccaaggacccaagaaggacgtcgtctttgtgattgatggttctgatggcgttggtatg
gagttcccaattatccaggaatttgttcgcagagttgtggagaaactcaatatcggtgag
aataagatccgagtcggtgtggtgcagtatggagattctccatacgcagacatctacctc
aactcccataagacaaaagaaggtgtcctaaatggcatcaaggaactcagacaacgaggg
gggagacagcgcaaccttggtcgggccatagactttgttggtcgtgaagttctgatttct
ggacgtggtggaagaaagcaggagggaattccacaatttgttgtggtggtttcaggagga
aaagcaacagacaatataagaacatctgcatcagctctcaaacaatcaggaattgtccca
tttagcattgggacaagggaagttgatgctcaggaattgcaggtgatctcctatatcccc
aaatatgcctatgcagttgatgacttgcctggtctttataccgttcaggacacactcatc
actacattgactgagctgtctagtgaagagctagccaaactgcgccctgtttaccctgca
gaatcagctccaattccaacagtacctcgtggagataagagggatgttgtgttcctcatt
gatggtacaacaaagatgcgcagtgagttccctgctataagaaacatgatacagcgtgtg
gtggagaagttggatgtgggtctggacaatgtgagggtgtcagttgtgcagtacagtgat
gatcccaaactggaatttctcctcaatgagcacttctctaaggaggaagttcgccaggcc
atacaaagaattaaaagcaaaggaggcaataagcttaacactgggcaagctctggaatat
gtctcgaagaacatctatcaaagatctgctggtagtcgtgtagaagaaggcgtgcctcag
tttctcatcttagtgaccggaggaaagtcaaatgatgatgtatctggtcctgccaaccaa
ctgaagttaagcaatgttgcccccttagcagttggagctcataatgctgatgcagaagaa
ttaaaactaatttccttcagtccagaactaacatacaccattagagacttccagcagcta
cctatagtggaacaagagcttttgaccaaagtcagtaccatgaccaaaacagtaacttct
gtcacccctatgcctagagtcaaactcagtcttggaagaaaggacatcatcttcctcatt
gatggctcagacagtgttggacaaaatggtgttgtgcacatccttgactttgtcttgaaa
gtggttgagcagcttgatatccaacctgaccaagttcgcgtggctttggtacagtatggt
gaaagacctaaaactgaattctctttgaactcccacaacaacaaacagtctgtcatctct
gcaatcaagagacttcaacacatgggtggacgtggtgctgacctggctgaggcaatcaag
tatgtgattcgaaatgagctccaagcttctgctggggtacgtctagcagaggcttcccag
catttagtggtgctcactggtggaaggtcaacctctgatgtatctgtatatggcccactc
cttaaaggctctcggatcaactgtataggaattggtgcagagaatgcagacacaaaacag
ctggaacagattacaaccacctctgctgacgtcctgcaggtggctactttcccaagtctt
ccaaacatacagagccagtttatagacagacttaatagaacaattgtcgatgaacctccc
cttgaagaaccaaggccttggctcccacaggcaaaggctgctgacattgtctttttagtt
gatgggtcaatcaatctgggcaaggacaatttcaaagaggtcatggaattcattctcaat
ttaattgacctcttcttcacggagagagacaaacttcagtttggtctagcacattatgct
gcagatgtgacagatgtcttctacctcaataccaacaaaaataaagatgacattatcagt
gccatatcccgagcagagtacaagggaggtcgggaaattaaaacaggcaatgccattcgc
catgttcagcaaacacactttgtaaaagaaaggggcagtcggaaggatgagggcattcca
cagatcctaatggtaatcactggtggacgatcaaaggatgatagcaagtcagcagcacta
gctctcaaagccactggtgtgcgtgtctacgccgttggggtgggtgacattgaggatgaa
attaataatttgggcagtgaggcaaacacagtggccagagccagcaccttccaagagctc
tctgagctgaatgagcagattttggaaacacttgatgatgaggtgaaaggaataaaactc
tgcacaggagtacaggacacagctagagcatgcaagttggatgttcttgtggggtttgat
gttgcttcccagaatatttttgctgctcagaggtcattagagtctaagatggctgctatt
ctccaacgcattacccagatgcagcccatcagctgcacctctggccaggtcccctcagta
caggtgggcatgctagcaatggactctgcctcagagcctgttctgctagacttcactgac
agatacacagatcttcttgagcccttcaaagccctgcgcagccgtggaccttttgttttg
aacgccgccacaatcaaagcttattctgaccgattcaagactcagccttcggacagtatc
aaggttgtgatccacttaactgatggattagatgcccaatataacattctgaaagagcga
gttgaacagatgcgtggatctggtgttaatagtttcatccttgttgctctggagagagtg
ccacgatttgaggatgcagtgctcttggaatttggccgtggcttcaggtacacacaacct
ctgcgtgtcaacctcatggacttggattatgagcttcaggaagaactggacaacattgct
gaacgggaatgctgctctgttccatgcaagtgtaatggccagagaggggacagaggggct
gttggtgtgcctggactgaagggtcaacctggtggtcagggcttgagtggacatcctggt
gatgaaggtggaccgggagagagaggtccacctggtgtaaatggaactcaaggattccaa
ggatgtcaaggacaaagaggttttaaaggatctcgaggatacaatggtgaaaagggtgaa
attggagagattggtttgaacggaatcaatggagaggagggaacaactggaattgctggc
cctcctggagacagaggaaaccccggcgaaagggggcctaaaggggccaaaggccaggca
ggagatgttggtcagactgggatccgtggtgatccaggcaccccaggaaatgacaacaaa
cagaggggaccaaaaggtgatccaggcgatgctggcccagtgggagagccaggggtggat
ggaagtaagggagatcctggtgaaccaggcagattgggctctgatggtagaagggggact
cctgggcaagctggtcttcctggaaagctcggtgctgatggtttacaaggagagccagga
gttgggggatcacggggtcctgctggaccaattggagcacctggtatcagaggagaagat
ggaaaccctggtccaccgggcccaggaggacaaccaggacctgctggagaaaagggcaga
agaggtgctgttggccgtaagggtgaaccaggggagcctggacctaaaggagttgttgga
ccccagggaccacgtggggagtctggtgaggatggtagtgatgggtttggtgtaattggt
cccaaaggaagaaagggtgatgaaggttttcctggtttccctggtccaaagggtgaggca
ggtgaccctggttcaaagggaggacctggacctagaggaaataatggccagaggggtaca
tcaggaggaattggtgggcctggacagaagggagaaattggatacccagggccctatggc
caaaaaggtcccagaggacctggtgtggtgcaatgtgacctggtcaagaaaatcagagat
aactgcccctgctgctatggtgctcaggaatgtcctctcttccctactgagttggcattt
gccctggatgcgtcagatggtgtatcacgcccagctttcaacaacatgcgggacactgtt
ctccgcctggtcagtgacatcactattgctgaaagcaactgtccacgaggagcccgtgtt
gctctagcgctctacaacaatgaggtgaccaccgagatccgctttgcagatgcgctgaag
aagcgagcacttattgagcgagttcaagggctccaggctctgcagacccgcaagcagcgc
agcttggagacagccatgaactttgttgcacagaacacattcaagagagtccgcagtggc
ttccttgtgcgcaaggttgctgttttcttcgtcaatggccctgtcacagtcacgaaggaa
ctcagtgcagctgctctgcgcctttacgatgctggaattgcctctgtatttcttcttaat
cgtgaagatcgtcaactcagcagaaccttgcagcttaacaacactgcactagcccaggtt
attgtcctaccatcaccgggaagtgctgaatacaacaatgttgtcaaaaagatcatgacc
tgccacatctgcctggatttctgtgccccggaacagatgtgtgactatgtccccccacca
agaggtagggaccggagagattccaccactgacttggacatcgacatgaccttcatcctt
gatagttcagagagcacctggccctctgtcttcacagagataaagctatacatggctcag
atggtagagcagttggagatgtctcctgaaccagccagcagtacccatcatgctcgagtg
gcacttgtccagcatgcaccttatgaatactttcacaatggcagcagcatccctatcagt
gtggcctttggcctgacagaccacaagtctgcgatcattgtccgaagcttccttctggat
aaggtgcaccagctggagggaggtcgagcccttgctgccgcacttgaaggcacagtggaa
aatgtgtttgagaaggtgccacatccccgccacttgaaggtgttagttctatttgtgact
ggaccagtagaagaggatgaggagaggatagtaagggccgccattgaagttaaatgcaaa
gggtacttcattgtggtgatggcagttggaaagatcttcagtgcaggtgatgttcgtgtc
ctggcccaagtggcaagcgagccctcagatgtgttttataagagggtggatggaccttca
ggcttctatgacgaccacattcagacatttgccagactattgcccaagtaccttagcctt
gaaaatgctttctacctttcccctgaagtctctaagaagtgccagtggtatcagagtgac
cagccacacaaagtcccattcagttcaccacatatgcatgagaaacaccagaagcatcat
gaacagaaggaagttcatgacataaaacataaagaatcagcagaacagaaaattcttaat
gccagtgaaatgatgggaatggtgtccactgcaactttgagtaaaccagaaatcacagaa
caaaagattctttctgcaagtgaagtgatggggattgtctcaactgcacccgtaaataca
tcagaaataaaatcagcagaacagaagattcttactccaagtgaaggattggggattgta
tctactgcacccttgagtaatccagaaattattaacagtcttatggacccatgctcactt
gactttgactctggactaccatgcaaagactatgcagctaaatggtactttgatagaaag
aacggattctgtacgcagttctggtttggaggttgtggaggaaatgacaataggtttgag
actgaggcagattgcctcaagcgctgcatgaagatagtgactgagcaaaaagcaagcgac
gagcatatcaaagctgtcctccctccagcaccagctccagcagttgccctgcactccagt
gtggatatctgcaagctaccaaaagaagaaggcagctgtgctaaatttgtgcttaagtgg
tattatgaccccctaagaggaaactgtgcacgcttctggtacggaggctgtggagggaac
cagaatcgctttgatacaaaagatgagtgtgagaaaggctgtggaaaaacagcacctgtt
aaacaagtggtcattgctgcagtgaaaacatag
DBGET
integrated database retrieval system
