Myxocyprinus asiaticus (Chinese sucker): 127448487
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Entry
127448487 CDS
T08782
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127448487
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
127448487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127448487
NCBI-ProteinID:
XP_051567023
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All DBs
Position
11:complement(41646061..41688375)
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AA seq
950 aa
AA seq
DB search
MSCWKTFTNTAPCLQWRFWFTWCPRKHTMKALPLETVRLLCSSQVITSVLNVVKELAENS
LDAGSSSLEVKLDNYGLDRIEVRDNGSGIKVTDVPVMAVKHYTSKISSHEDLEHLETYGF
RGEALASICAISKVFITTKTTADDFSIQYAVDHNGQIVSQKPSHLGEGTTVCAADLFKNL
PVRRQYYSNTKKCKEELKRVQNLLMAYAVVKPELRITLSHNKAVVWQKARVSDHRAALMA
VLGAASVANMLPVQHRQEQPEKESRTSLEPHEIVIGGFLPKPDSDFNMTSSSSPDKTFIF
VNSRPVHHKEILKLVKQYYTSAHSNNESVNRRYPHLMMNITIPASTVDVNLTPDKTEVML
QNKEGVLLAVETLLISLYGSYSVGDDNPQNSSKAVQIQQMDCTDKGESSVVIPTPTKDIS
LMDPPELLEHSSTIANKQDSELSLSNTANTSSSSSSEDWVINRSSSDFDSSHFSLSADDV
VMNSPAVLNCNSPKPSNSDHGQESEISAERWSMGRAFSNQTTGECLEPVKLHVPLTNQES
GTTASGPTSKGASPTKRPSNVIMEKMAKLTAYDLISNRSVRQPSSAFSLFEKDTRSLILQ
ESPRASLQDVTAAVRERWESLGEEERKKYESKAEKSLKAYNLQRKRATEGGGQCGEGKKQ
MSADSSLNKAQGVKRKAPLSNQQALNKLFSSQPSSKGSPAKFSKPLPFSIATLKQSLNLF
SYQNSSSAQGLRLVNRLASHGAWVVLCGRKLMLLNPFRVEEALLFKRLLENNILPAVRQQ
TPVQLTDGVLGGPEYMDVLLNMEKGSPGFNGDTYFTDPRLVANGFEIRIIPGSSSTERRV
EMTGMADCMPFYGLGDLREILQAVKARDAKNAEQCRPLKVSNYLESEAVRLARQLPVNLS
RADVTNTLCRMKQELKEDSLVCLHGKPFYQDLVTVPETEEEALKIMSSSQ
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgttggaagacttttaccaataccgccccctgtctgcagtggcggttctggttt
acttggtgccccaggaagcacactatgaaggcacttccacttgagacagtgcgtctgctg
tgcagctcccaggttataacatctgtcctgaatgttgtcaaggagctagctgaaaattca
ctggatgctggttcctcgagtctcgaagtcaaactggacaattatggattggatcgcatt
gaagtcagagacaacggctctggaattaaagtgactgatgttcctgtgatggccgtcaaa
cactacacatctaaaatctccagtcacgaagatctagagcacctagagacttacggcttc
cgtggagaagctctggcatctatatgtgccatctcaaaggtgtttattactactaaaacc
acagctgatgattttagcattcaatatgcagttgatcacaatggtcagattgtgtctcag
aaaccatcgcatcttggcgagggcaccactgtgtgtgcagcagatctgttcaagaacctc
cctgtcaggcggcagtattattccaacaccaagaaatgcaaagaggaactaaagagggtc
cagaatttgctcatggcttatgctgttgttaagcctgagttaaggatcacgttgagtcac
aacaaggctgttgtctggcagaaggccagggtgtcggatcaccgagctgccctcatggcc
gtgctcggagcggcctccgtagccaacatgctccccgtccagcatcgccaggagcaacca
gagaaagaaagtcgaacaagtttggaaccacatgagattgtcatcggcgggttccttcct
aaaccggactcagattttaatatgacaagctcctcttcacctgataaaacattcattttt
gtaaatagtcggcctgtacatcacaaagaaatacttaagcttgtcaagcaatactacaca
agtgctcattctaataatgaatctgtaaaccgccggtatccccatttaatgatgaacatc
accatacctgcctcgactgtggatgttaacttgacgccagacaaaacagaagtgatgcta
cagaataaggaaggagtgctcttggcagttgagactttgttgatctccttgtatgggtct
tactccgttggtgatgataatcctcaaaattcctccaaagctgtccaaattcaacaaatg
gattgcactgataagggcgagtctagtgtagttatacctacacctaccaaagatattagt
ttgatggacccaccagaactgctcgaacattcttccacaattgcaaataaacaagacagc
gagctatctttgagcaacactgcaaacaccagctcctcctcatcttcagaggattgggta
atcaacagaagctcaagtgattttgacagtagtcatttctcattatctgctgatgatgtt
gtaatgaactctcctgctgttcttaactgtaactccccaaagccctctaacagtgaccat
ggtcaagagagtgaaatttctgctgagagatggagcatgggtagggccttctcaaatcaa
accacaggtgagtgtctagaacctgtaaaactccatgtcccactaacaaatcaagaaagt
ggaacaactgcaagtgggcctacaagtaagggggccagcccaaccaagaggccttccaat
gtgataatggagaaaatggctaagctgacagcctacgacctgatcagcaaccgctctgtg
cgtcagccttcgtctgccttttcgctatttgagaaggacacaagatcgctcatactccag
gagagcccaagagccagtctgcaggatgtcacagctgcggtgagagagagatgggaaagc
ctcggggaggaagagcgaaaaaagtatgaaagcaaggcagaaaagtctctgaaagcctac
aaccttcaaaggaaaagggcaacagagggaggtggccagtgcggagagggcaagaagcag
atgagcgcagactcttcattgaacaaagctcaaggcgtgaagcgcaaggcccccctctca
aaccagcaggccctgaacaaactcttctcctctcagccctcgagtaaggggagcccagcc
aagttctccaaacccctcccgttcagtattgcaaccctcaagcagagtcttaacctcttc
tcctaccagaacagctcaagtgcacagggcctcaggcttgtaaaccgcttggcttctcac
ggtgcttgggtcgttttatgcggcagaaagctcatgttgttgaacccgtttcgagtggag
gaggccttgctgtttaaaagacttctggagaataatatacttccagcagtgaggcagcag
acccctgttcagctgacagatggggtacttggtgggccagagtacatggatgttctcttg
aacatggagaaaggcagtcccggttttaatggcgacacctacttcactgatcctaggctt
gtggcaaatggtttcgagattaggattatcccaggttcctcgtctactgagaggcgtgtt
gaaatgacgggcatggctgactgcatgcctttctatgggctaggagacctgagggagatt
ctgcaggctgtaaaggcccgggatgcaaaaaatgcggagcaatgtagaccgctcaaagtc
tcaaactacctagagagtgaggctgtaagactagctagacagttacctgtgaacctctcc
agagctgatgtaaccaatacactttgccgaatgaaacaggaactgaaagaggacagtctt
gtctgtcttcatggaaaaccattttatcaagatctggttactgttcctgaaacagaggag
gaggctctcaagatcatgtctagttctcaataa
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