Myxocyprinus asiaticus (Chinese sucker): 127448769
Help
Entry
127448769 CDS
T08782
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
masi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127448769
09124 Replication and repair
03420 Nucleotide excision repair
127448769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127448769
03400 DNA repair and recombination proteins [BR:
masi03400
]
127448769
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127448769
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127448769
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127448769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
127448769
NCBI-ProteinID:
XP_051567579
LinkDB
All DBs
Position
12:complement(5281165..5312171)
Genome browser
AA seq
782 aa
AA seq
DB search
MGKKDKSDRERKSKKRYYDEEEEDEEVTGSESQEAVPAAAGKQVDESSTKLDEYGAKDYR
IQMILKNDHSARPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYS
LYAAVSVGLQTSDIIEYLQKLSKTSVPDGIVQFIKLCTVSYGKVKMVLKHNRYFVESTFP
DVIQRLLQDSVIRDCRLRSAVGQETELITEVISSKSAISKFQQDNGGPSTSQPADGQHSG
TQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRNDT
VNPDINMDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSW
EAERVMEWMKSQEWGLIILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKF
RACQFLIRFHERRNDKIMVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLMFSSRDEQQQLLQKVLAASD
IDAEEEVVMGDMGGKPQFSRRMGTMSSMSGADDTVYMEYQMSRGSKAAGCKNVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaagataaaagtgatcgagagaggaagtccaagaagcgttattacgatgag
gaagaagaagacgaagaggtgacgggcagtgagtctcaggaggccgtacctgcagctgct
gggaaacaggtggatgaatccagcactaaactggatgagtatggagccaaagactacaga
atacagatgatcctaaagaacgaccactctgcacgacccctatgggtggctcctgatggt
catatcttcctggaggctttctctcctgtgtataaatacgctcaggacttcctggtggcc
atagcagagccggtgtgcagacccacgcatgtgcatgagtacaagctgacggcatattct
ctgtacgccgctgtgagcgtcggtctgcagacctctgacatcatagagtacctgcagaaa
ctcagcaagacctctgtgcctgacggcattgtgcagtttattaagttgtgcacagtgagc
tatggtaaagtcaaaatggtcctgaaacacaacaggtactttgttgagagtactttcccc
gatgtcattcagaggctattacaggactctgtgattcgagactgtcgacttcggtcagct
gtggggcaggagacagagctcatcactgaggtcatctccagcaaatcagctatctcaaag
tttcagcaggataacggaggtccatccacctctcagcctgcagatgggcagcactcagga
actcaagtgcctgaggacatcttcagttactatgaacagatggataaagaggaggaagaa
gaggaagagacacagacagtgtcatttgagatccgtcaggaaatgattgaggagcttcag
aaacgctgcattcagttagagtacccactcctggcggagtatgacttccgtaacgacaca
gtgaaccctgacatcaacatggacctgaagcccaccgctgtactgagaccctatcaggag
aagagtctgaggaaaatgtttgggaacggcagagctcgatctggagtcattgtgctgcct
tgcggagctggaaagtcactagtgggcgtaactgctgcctgtacagttcgtaagcgctgc
ctggtgctgggaaactcctccgtatcagtggaacagtggaaggctcagtttaagatgtgg
tccaccattgatgactcccagatctgtcgcttcacttccgatgcgaaggacaagcccatc
ggctgctcggtggccatcagcacatactccatgctgggtcacactaccaaacgctcatgg
gaggctgaaagggtcatggaatggatgaaaagtcaggagtgggggctcattatactggac
gaggtgcacactattccagcaaagatgttccgtcgtgttctgacaatagtccaggctcac
tgtaaactgggactgactgccacactagtgagagaggatgataagattgtcgatcttaac
ttcctgattgggccgaagctgtatgaggcgaactggatggaactgcagaacaatggatac
attgctaaagtccagtgtgctgaggtgtggtgtcccatgtctcctgagttttatcgtgaa
tacgtggccataaagacgaaaaagaggattctgctctacaccatgaaccccaacaagttc
cgtgcatgtcagttcctgatccgcttccacgagagaagaaacgacaagatcatggtcttc
gccgacaacgtcttcgctctcaaagaatacgccatccgcctgaacaaaccatatatttat
ggacccacatcacaaggagaacgtatgcagatccttcaaaacttcaaacacaatcccaaa
atcaacaccatcttcatctccaaggtaggagacacttcatttgacctgcctgaggcaaac
gtgctgattcagatctcttctcatggtggttctcgccgtcaggaagctcagagactgggc
agagtgctgcgagccaagaaaggtatggtcgcagaggaatacaacgcttacttctactca
cttgtctctcaagacacacaggaaatggcatattccaccaagagacagcgcttcctggtg
gaccagggatacagtttcaaggtgatcacaaaattggctgggatggaggaggaagaccta
atgttctcctctcgagatgaacagcagcagctcttgcagaaggttctggcagcatcagat
atcgatgcagaagaggaagtggtgatgggagatatgggagggaaaccacagttttctcgt
cgtatgggaactatgagctccatgtctggcgcagatgatacagtctacatggaataccag
atgtcccgcggaagcaaggctgcaggctgcaagaacgtccaccctctttttaaacgtttc
cgcaagtaa
DBGET
integrated database retrieval system
