Myxocyprinus asiaticus (Chinese sucker): 127449147
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Entry
127449147 CDS
T08782
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04140
Autophagy - animal
masi04148
Efferocytosis
masi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127449147
04148 Efferocytosis
127449147
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127449147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127449147
Membrane trafficking [BR:
masi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127449147
Hops complex
127449147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
127449147
NCBI-ProteinID:
XP_051568340
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All DBs
Position
12:4948028..4975529
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AA seq
835 aa
AA seq
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MAFVTANWNPLGEAFYRKIELYEMGWNLKDGLRDCLVAAAPYGGPIALLKGLQCRSPNAR
PQLEIYSSSGLPLANFPWKSGVVKQLGWTVSDDLLCVQEDGTVLVYNLFGDFKRHFSMGN
EVSQSKVLETKIFHSPYGTGVAILTGALRFTLATNIDDIKLRRLPEVPGLQGAPTCWAVL
TQDRQSKVLVANGSHLFVLDNTACTPVTPPGLSPQASRIVHMCVSFSYKYLALLTDSGHV
WMGTSNLRDKLSEVDTKIKSPPKQMAWCRRPKSQQPSVVILWDRLLIVVGECKDTIQYHL
DDDTVLVPELDGVRIINGTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLSEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPEQFVSLCR
DLRVLNAVRDYTVGIPLTHTQFKQMTVQVLIDRLVYRKFYPLAIEVCRYLKTPEYQGVSR
VLKHWACYKVQQKEESDEVIAKAVIVKLADVAGISYSEIATKAYESGRTELAIKLLEFEP
RSGEQVPLLLKMKKSSLALSKAIESGDTDLVYTVVMYLKNELNRGDFFMMLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNVYVKASYKEQRLEARITHLQSAGDEYGKAKNE
FAAKATEEEMRLLRFQKKLEDEKGEPLVGFSLHETMTTLLSVGLHKHAEQLYKDFRVPEK
RFWWLKLKALAEKEDWEELEKFAKSKKSPIGYLPFVEMCMKYHNKYEARKYVSKVIPEKK
VKAHLAVGDLESAVEAAIERRNDSEISTVLSRCSATADHTLVDRLNRAKATAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaacccgctgggcgaggcgttttacagaaagattgaa
ttgtatgagatgggctggaatcttaaggatggtttgagagattgtctggtggctgcggct
ccttatgggggtcccattgctctcttaaaggggctccaatgtcgctctcccaatgccaga
cctcagttagagatctactcttcctctggactgcctctggccaattttccatggaagagt
ggagtggtgaaacagttgggttggacagtgtctgatgatctgctgtgtgttcaggaggat
ggcactgttcttgtctataatctctttggtgacttcaagagacacttcagcatgggcaat
gaagtttctcagagcaaggtgctggagaccaagattttccattcgccatatgggactgga
gttgctatattgacaggtgccttacggttcactctggccacaaacattgatgacataaaa
ctgaggcggctacctgaggttccaggtctacagggagcacccacatgctgggctgttctg
actcaggataggcaaagtaaagtgctggttgcgaatggatctcatctatttgtcctggac
aatactgcctgcactcctgtgactcccccaggtctctctcctcaagcatccaggatagtg
cacatgtgtgtctcgttcagttataagtatctagctctcctcactgactctggccatgtg
tggatgggcacgtccaacttaagggataaactgagtgaagtggacaccaaaatcaaatct
ccccccaaacagatggcctggtgccgtaggcccaagagtcagcagccatcagtagtgata
ttgtgggatcggctcctcatagtggtgggagagtgtaaagacacaattcagtaccacctg
gacgatgacactgttttggtgccggaattggacggggtcagaatcataaatggaacacat
catgagcttctgcaggaagtcccaggtgcctgtgaggagatctttaaaattgcatcaatg
gctcctggagctttactcctggaggcacataaagaatatgagaaagagagtcagaaggca
gacgagtatctgagagagattaaagaacagagtctgctgagtgaggcagtgaggcagtgt
gtggaggcagccggacacgaacacgaaccggagacacagaaaacactcctgagggcggcc
tcatttgggaagtgtttcctgagtaattttcctcctgagcagtttgtcagcttgtgcaga
gacctgcgggtattgaatgcagtccgagactataccgtcggcattcccctcacgcacacg
cagttcaaacagatgactgtacaggtgctcatagacagattggtatatcgtaaattctat
ccactggccattgaggtttgccgttatctaaagactccagaataccagggagtgagcaga
gtactcaaacactgggcctgctacaaggtacagcagaaggaggagtctgatgaggtcata
gcaaaagcagtaattgtgaagcttgctgatgttgctgggatctcatattctgaaatcgcc
actaaagcgtatgagagtggacgcacagagctcgctattaagttgttggaatttgagcca
cgctctggtgagcaggtcccactgctgttaaaaatgaagaaaagttctctagctttgagc
aaagctattgagagtggagacacagacctcgtgtacacagtggtaatgtaccttaagaat
gagctaaacagaggagacttcttcatgatgttgaggaaccagcctgtggctttgagcctc
tacagacagttctgtaaacatcaggagcaggacacattgaaggatctgttcaatcaagat
gacgatcaccaagaactcggcaatgtctatgtaaaggccagttataaagagcagagattg
gaggctcggattacccatttacaaagtgctggggacgagtacggtaaagccaagaatgaa
tttgctgccaaggccacagaagaagagatgcggctgcttcggttccagaagaagttagaa
gacgagaagggtgagccgctggtgggattctctcttcatgaaaccatgaccacactgctg
tctgtgggactgcacaaacacgccgagcaactctacaaggacttcagagtgcctgaaaag
aggttctggtggctgaagttgaaggctctggctgagaaggaggactgggaagagttggag
aaatttgccaaaagcaagaagtctcctattggatacctgccctttgtcgagatgtgcatg
aaataccataacaaatatgaagccaggaaatatgtgtctaaagtcataccagagaagaag
gtcaaggctcaccttgctgtaggagatctggagagtgccgtagaggctgcaatcgagaga
cggaatgactccgagatcagtactgttctttcacggtgttcagccaccgcagatcatact
ctggttgatcgcctaaaccgtgctaaagccactgctgccaaaaagtga
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