Myxocyprinus asiaticus (Chinese sucker): 127449223
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Entry
127449223 CDS
T08782
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127449223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127449223
Membrane trafficking [BR:
masi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127449223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DUF7646
TPR-S
Motif
Other DBs
NCBI-GeneID:
127449223
NCBI-ProteinID:
XP_051568477
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All DBs
Position
12:1875579..1897878
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AA seq
867 aa
AA seq
DB search
MSVKAFELVPAVEREQVMGEKVRVNIECIECCGKHLYLGTNDCFVHHFLLEEHTTAKGKL
AYNAQKLLHKYLGLKKPVVELKAASALERLIVLCDSTIIVVDMVTLEPVPTGGTKLKGVT
SFCINENPVTGDPFCVEMAVVSARRRAVQICTLHEDRVQMLKEVTTPEQPCALSLDGYFI
CLALPTRYMIQNYNTGASQDLFPYDCEERKPIVKRIGREEFLLAAPGGLGMFANAEGVSQ
RAPVSWSESVIAAAVCFPYVVALDEGFVTIHSMLDQQLKQTLSFRDGQLLQDFEGKVVLA
STKAVYMLVPLPLEHQIQDLLASHRVEEALTLTEAAQRNIPKEKYQKLHKRILQQAGFIQ
FGQLQFLEAKEHFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLTQGNQEK
VQHFKRFLISYLHEVRSSDSANGFREDVDTALLKLYAETGHESLLDLLASDNACLLADCA
PWLEKHHKYFALGLLYHYNGQDSAALQMWVKIVNGDLQDSTRPDLFEYVVDFLCFCSNLD
LVWRHADWALQKDQKIGVQIFTKRPISEEKRGQLNPDDVVTYLQKHNQGLLLYLEHLVLE
KRLQKEKYHTHLAVLYADRVLSLIARPSATEEQLSAARQKLQRLLKESSLYKVQLLLGKL
QDAELLLLERATLHGKLEEHDKALHILVHQLKDSPAAEEYCSWASACQDQAYRQNLFHQL
LSVYLDPDVPGGAQNIAAIDLLNRHADVFDAVLVLKLLPEEWSLPLLRPFLCGAVRASVH
ARCTSQVAVGLARAENLQLQHDRLKYRGGPILISEKKGCRLCHNTFSEPDCACLPGGTPV
HIHCVAKKALDLPVERQKENAHHSNHT
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaagcttttgagctggttcccgccgtggagcgggagcaggtgatgggtgaa
aaggtgcgcgttaacatcgaatgcatagagtgctgcggcaaacacctgtacctgggaacc
aatgactgcttcgtccatcacttcctactagaggagcacacaacagcaaagggtaagctg
gcctacaatgcccagaaacttctgcacaaatacctgggcctgaagaagccagtggtggag
ttaaaggcggcctctgctttggaacgtctaattgtcctctgtgattcaaccatcattgtt
gtggacatggttaccctagagcctgtgcccaccgggggcactaagcttaaaggtgtgact
tcgttttgtattaacgagaaccctgtaactggagacccattctgtgtggaaatggcagtg
gtgtcggcacgcagacgggcggtccagatctgtacgctccacgaggaccgggtgcagatg
ttaaaggaagtgactacaccagagcagccctgtgctttgagcctggatgggtactttatc
tgcctggcccttcccacacggtatatgattcagaactacaacacaggagcctcccaggat
ctgtttccttacgactgtgaagagaggaaacccatcgtcaagaggattggccgggaagag
tttctcctggctgccccaggtgggcttgggatgtttgctaacgcagagggcgtatctcag
cgtgccccggtgagctggtcagagagcgtgattgcagcggctgtgtgttttccatatgtg
gttgcattggatgaaggctttgtgaccattcacagcatgttggaccagcagctcaaacag
acactgtcctttagagatggacaactcctgcaggattttgaaggtaaggtggtgttggcc
tctacaaaggcggtgtatatgttggtgcctctccctctggagcatcagatccaagacctc
ttggcaagccatcgagtcgaagaggcgctgacgctcacagaagctgcacagagaaacatt
cccaaagaaaagtatcagaaattgcacaaaagaattctccaacaagcaggattcatccag
tttggccagcttcagtttttagaagcaaaagaacattttagaaaaggacagctggatgta
cgggagctgatttccctttatccactgctcctgcccgcctcttcctccttcacacggtgc
catccaccacttcacgaatttgctgacctgaatcatctgacgcagggaaaccaggagaaa
gtacagcatttcaaacgtttcctcattagctacctacacgaggtgcgcagcagcgacagt
gctaatggtttccgtgaagatgtggacacggcattgctgaagctctacgcagagaccggc
cacgaaagtcttctggacttgctggcctccgacaatgcctgcctcctggcagactgtgcc
ccctggctggagaaacatcacaagtattttgctcttgggcttctatatcactacaatggt
caggattctgctgctttacagatgtgggttaagattgtcaacggggatctccaggactca
acaagaccagatctgtttgaatatgttgtggattttctttgtttctgttccaaccttgac
cttgtatggcggcatgcagactgggcattacagaaagatcaaaagattggtgtccagatc
ttcaccaaaaggccaatctcagaggaaaagcggggacagttaaacccagatgacgttgtt
acgtatttgcagaagcacaatcaaggccttctgctctacctggaacacctggtactagag
aagagattgcaaaaagagaagtatcacacacatctggctgtgctgtatgcagacagagtg
ctgagccttatcgcacgaccatcagccactgaggagcaactgtctgctgcccgccagaaa
ctacaacggttactgaaagagtccagtctgtacaaagtccagttactactaggtaaactt
caggacgctgagctgctgctactagagcgagctacactacatgggaagttagaggaacat
gacaaggccttgcacattctagtgcaccagctcaaagactcgcctgcggcggaggaatac
tgctcctgggcctctgcgtgtcaggaccaggcctaccgtcagaatcttttccaccaactc
ttgagtgtttatctggacccggatgtaccgggaggggctcaaaacatagccgccattgac
ttgcttaaccggcatgctgacgttttcgatgcagtgctggtgttaaagctcctcccagag
gagtggtctttgccactgctccgtcctttcctgtgtggggcagtaagggcaagtgtgcat
gcacgttgcacttcacaggttgcagtgggactggcccgagcagaaaacctccagcttcag
catgaccggctgaagtatcgaggaggcccaatattaatatctgaaaagaagggatgccgg
ctgtgccacaatacctttagcgagccagactgcgcctgcctgcccggcggaacgcctgtc
catattcactgtgtcgccaagaaagccctggacttgccagtagagcggcaaaaggaaaac
gcccaccacagcaaccacacatga
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