Myxocyprinus asiaticus (Chinese sucker): 127449259
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Entry
127449259 CDS
T08782
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127449259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127449259
03036 Chromosome and associated proteins [BR:
masi03036
]
127449259
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127449259
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127449259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
127449259
NCBI-ProteinID:
XP_051568540
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Position
12:complement(405474..421180)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGTNTGFGPGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDGPIRTIHWIKAPNYSCIMSGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNSQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcgggacgaatacgggttttgggcccgggggaacaggtgtatttggcagc
accaccacagatagtcataacccaatgaaggatgttgaagtaacatcaccacccgatgac
agcattagctgtttggcgttcagtcctcctacaatgcctggaaactttctcatcggaggc
tcttgggccaatgacgtgcggtgctgggaggttcaagataatgggcaaactgtcccaaaa
gcccagcagatgcacacaggcccagtgctggatgtgtgctggagtgatgatggaagtaaa
gtctttacagcctcatgtgataaaactgctaagatgtgggatctgaacagcaatcaggct
atccagatagcacagcatgatggcccaatcaggacaattcactggataaaagccccaaac
tacagctgtataatgagtggcagctgggacaaaacactgaagttttgggatacgcgttcc
ccaaacccaatgatgtcactgcagatgccagagaggtgttactgtgcagatgtggtatat
cctatggctgtagtggccactgcagaacgaggccttatcgtttaccagttggaaaatcag
ccctcagagtttcgccgcatagattcgccactgaagcatcagcaccgctgtgtggctatc
tttaaggacaagcagagtaaacctactggttttgcactgggcagcattgaaggacgagtt
gccattcactacataaacccacctaacccagccaaggacaatttcacctttaagtgccac
aggtccaatggaaccaacactgccacaccccaagatatttatgctgtaaacgctatctcc
ttccaccctgtccatggcactctggcgacagtaggctctgatgggcgctttagtttctgg
gataaagatgctcgcactaagctgaagacctctgaacaattggatcaaccaataacagca
tgttgcttcaataacaatgggaacatatttgcctatgcctccagttatgactggtctaag
ggacacgagtactacaattcccagaaaaagaattacatcttcttgaggaacgcggctgag
gagctgaagccacgaaataagaaatggtga
DBGET
integrated database retrieval system