Myxocyprinus asiaticus (Chinese sucker): 127449654
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Entry
127449654 CDS
T08782
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127449654
09123 Folding, sorting and degradation
03018 RNA degradation
127449654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127449654
03041 Spliceosome [BR:
masi03041
]
127449654
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127449654
mRNA degradation factors
5'-3' decay
Lsm complex
127449654
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127449654
Complex C
U2 snRNP components
127449654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
127449654
NCBI-ProteinID:
XP_051569164
LinkDB
All DBs
Position
12:25455667..25458197
Genome browser
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctattctactcgtttttcaagtccttggtcggcaaagatgttgtggtggagcttaag
aatgacttgagcatatgtggaacattacactcagtagatcagtatctgaacatcaaactg
acagatatcagtgtcactgatccagagaaatatccacatatgttgtcagtgaaaaactgc
ttcatccgtggatcagtggtgcggtatgttcagcttcctgcagatgaggtggacacgcag
ctgttacaagacgctgcacgcaaagaagctatgcaacagaagcaatga
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