Myxocyprinus asiaticus (Chinese sucker): 127449959
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Entry
127449959 CDS
T08782
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04120
Ubiquitin mediated proteolysis
masi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127449959
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127449959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127449959
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127449959
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127449959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127449959
NCBI-ProteinID:
XP_051569575
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All DBs
Position
13:15664579..15686019
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AA seq
548 aa
AA seq
DB search
MGAILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADTPDEGAKPRALYGVD
FTFDSDARVAITIYCQAFEEFSNGMAIYSPKSPALVSETVYYKRGVSQQFTLPSFKIDFS
EWKEDDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQIV
DRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSCA
DTLRYQANNCPICRLPFRALLQIRAVRRKPGALSPISFSPVLAQSMDHDEHSSSDSVPPG
FEPISLLEALNGLGAMSPGIPSAPLYDEINFSGSLSGESRQLSSPEHSGDSGGQKSKVSK
SPDSTLRSPSSPIQEEDEEKLSDMSDAQAHMLLSSSPAPTEGTAGEDAPDSLSPEDEDRL
NLEEEAMNDCSSEHSSFTKTESDPLGDMSLPGLYGSSESLNTQSTCCSSQPLLGPSSHLH
MEDEELDD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaattcttagtcgaagaatcgccggtgttgaggatatcgatatccaggccaat
tctgcttacagatatcctcccaaatcaggaaactattttgccagccactttttcatggga
ggagagaagtttgacactcctcatccagagggttacctctttggggagaacatggatctt
aactttcttggcaaccgcccagtgcagtttccctatgttaccccagcaccccatgagccg
gtcaagacattgagaagtcttgtcaacatcagaaaagactcgttacgattggtcaggtat
aaagatgatgctgacactcctgatgaaggagccaaaccaagggccttgtatggagtggat
ttcacctttgattcagatgctcgagtggccatcaccatctactgtcaggcttttgaggag
ttctctaatgggatggcaatatacagcccaaaaagcccggcgttggtctctgagactgta
tattacaaaagaggggttagccagcagtttaccctgccatccttcaagattgatttctct
gaatggaaggaagacgatctcaactttgatttggacagaggtgtttttcctatggtgatt
caggctgtagttgatgaaggagatgattgtttgggacatgcgcatgtactgctggcagca
tttgaaagacatgttgatggcagtttttcagtgaagcctttgaaacagaaacaaatagtg
gaccgtgttagctacttgttacaggagatttatggaattgagaataagaacaatcaagag
acaaagccatctgatgatgagaacagtgacaacagcaatgagtgtgtagtgtgtctgtca
gatctacgggacactctgattttaccctgtaggcacctgtgtctgtgtaactcatgtgct
gatactctacgctaccaggccaacaattgcccgatctgtcgactgccatttcgagccctt
cttcagatccgagctgtaagaaggaagcctggggcgctttcacctatttccttcagtcca
gtgctggctcagagcatggatcatgatgagcattcaagctcagactcagttcctcccggc
tttgagcccatctcccttctggaggctttgaatgggcttggtgccatgtcccctggcatt
ccatctgcgcctctttatgatgagatcaacttctctgggagcctgagtggagagagccgg
cagctcagttcacctgagcactctggagacagtggtggacagaagagcaaagtcagcaag
tcaccagatagcactctgcgctctccatcatctcccattcaggaggaggatgaagaaaag
ctgtcagatatgtctgacgcacaagcccacatgctactgtccagcagccctgcccccact
gagggtactgctggggaggatgccccagactcactttctcctgaagatgaggatcgactg
aatttggaggaagaggccatgaatgactgtagcagcgagcacagcagcttcaccaaaact
gaaagtgacccactgggagacatgtccttgcctggattatatggctcatcagaaagtctg
aacactcagagtacatgctgctccagtcagccactcttgggtccttcaagccatttgcac
atggaggatgaagaactggatgattaa
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