Myxocyprinus asiaticus (Chinese sucker): 127450022
Help
Entry
127450022 CDS
T08782
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127450022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127450022
03009 Ribosome biogenesis [BR:
masi03009
]
127450022
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127450022
Spliceosome [BR:
masi03041
]
Complex A
U1 snRNP components
U1 related factors
127450022
Complex B
127450022
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Pre-60S particles
Helicases
127450022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127450022
NCBI-ProteinID:
XP_051569684
LinkDB
All DBs
Position
13:complement(42135023..42142338)
Genome browser
AA seq
613 aa
AA seq
DB search
MPGYTDRDRGRDRGSYSSGPPRFGGNRNGPPPGKKFGNPGDRLRKKHWNLDELPKFEKNF
YQEHLEVSRRSAQDVEHYRRNKEITVKGRDCPKPIMKFHEANFPNYVMDVISKQNWTDPT
PIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPFLEHGDGPICLVLAPTRE
LAQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTN
LCRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYV
QINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDY
PNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDR
GGRFRGGRGGGYRDDRRDRHSGGRRDFNSYGQDNRNGDSYGQKKVFGNKTQNGSSGYNSS
GNSYNSGYSNNGPSNFSGNQSGGYGNQSYPNQQFGANQGGVQNGMSHPPQFPFNPQQMPQ
SVSFPMPPPAFPQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccaggatacacagacagggaccgcggtcgcgacagaggcagttacagcagtggcccc
ccacgttttggaggcaaccgaaatggacctcccccaggaaagaagtttgggaatcctggt
gatcggctgcggaaaaaacactggaacttggatgaactgcccaagtttgagaagaacttt
tatcaagagcaccttgaggtttctcggaggtcagctcaagacgttgagcactacaggaga
aataaagagattacagtgaagggaagagactgtcccaaaccaattatgaagtttcatgaa
gcaaacttcccaaactatgtgatggatgtgatcagtaaacagaactggaccgatccaact
cccattcagtctcaggggtggccagtggcacttagtggcaaagatatggtcggcattgca
cagactggatctgggaaaacccttgcgtatttgctccccgctatcgtacacataaaccac
caaccattcctggaacatggcgacggccccatttgtttagtgctggctcccacccgtgaa
cttgcacagcaggtccagcaggtggcggcagagtacggcaaagcgtctcgtctcaagtcc
acctgtatctatggaggagctccaaagggaccacagatccgggacctggaaaggggagtt
gagatctgcattgccacccctggtagacttattgatttcctggaggttggaaagaccaat
ctgtgtcgatgcacatacctagtgctagatgaggctgaccggatgctggatatggggttt
gaaccccagattagaaaaattctggaccagattagacctgaccgacagactctgatgtgg
agtgctacctggcctaaagaggttaggcagctggctgaggactttctcaaagagtatgta
cagatcaacgttggagctctgcagctcagcgccaaccacaatatcctgcagattgtggat
gtctgcaatgatggagagaaagaggataaactgttgcgcctgttggaggaaatcatgagc
gagaaggaaaacaagaccatcatctttgtggagaccaaaagaaggtgtgatgatctgacc
aggaggatgcgcagggacgggtggcctgcaatgggtatccatggagacaagagccagcag
gagagagactgggtcctaaacgaatttaaatttggcaaagcccccattctcattgccaca
gacgttgcctccagaggactagatgttgaagacgtcaaatttgtcattaactatgactac
cccaacaattctgaggactacattcaccgtattggccgtacggctcgcagtcagaaaact
ggaacggcatacactttctttacacccaacaacatgaaacaagcacacgacctggtctcg
gtcctccgtgaggcaaatcaagccatcaaccccaaactcatccagatggctgaagacaga
ggaggtcgtttcaggggtggtcgcggtggagggtatagggatgaccgtcgggaccgccat
tctggtggcagacgggacttcaatagctacggtcaggacaaccgtaatggggactcttat
ggacaaaagaaggtatttggaaacaagactcaaaatggatcaagcggctacaatagcagt
ggtaacagctataacagcggatacagcaataatggaccatctaacttcagtggcaaccag
tctggtggctacggaaaccaaagttatccgaaccagcagtttggtgccaaccaagggggt
gttcagaatggcatgagccatcccccacagttcccctttaacccccaacagatgccccag
tctgtgtcctttcccatgccccctcctgccttcccacagtaa
DBGET
integrated database retrieval system
