Myxocyprinus asiaticus (Chinese sucker): 127450225
Help
Entry
127450225 CDS
T08782
Name
(RefSeq) focadhesin-like isoform X1
KO
K27498
focadhesin
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127450225
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127450225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
127450225
NCBI-ProteinID:
XP_051570142
LinkDB
All DBs
Position
1:16529714..16635910
Genome browser
AA seq
1808 aa
AA seq
DB search
MTENLKTRFEFPSSLIQAQAVRTLVAAVLKEKGQNERICQSSTKSLALESLWEQCSSDST
VVRSACCDALVLLVEQGHADLQYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRNTDA
NFTCPYSIRSFPHPYITVLENRPDCWPALLQEIDDFIQLASDKDEPVFVEMLSPFLRYLY
CEPQRLSENALLRHSLLRVLLMPRGATQSDSQQGKGTLSTRVVREMIRSLCNLLPYMLVD
SVTAVVEFSSFAESLTSALLTDPGFWRKELTQLALQLLCACQLSVQLGGELMSLLHTLHQ
LIPANAEDIPSEQVIMGISLLLLKASTSQQTALLELAVKIVPPEISPPWGASLLVMPLLQ
VLSCSTLMEALTDTQIHMKNLKLANSLLQMVQREPSIRKENSTQLTLPFSTWYSELQVAT
SVLHRISMDSMSAVEWLYSLQSSLSVCEHVPDTVCLLVSHLIISSHGDLCRLALDAAAAI
AESDPAKVPGLLPVLMFKLGRVSDSALSHSVLYTVPRLGTHKFCIPQVLHVLQTLGSSPR
LRPVALRLLALLWQKQDRVYPDLQRLMSQLERSSVVIGKETQWEQILARAACVRDICRER
PYQHGGDMLAAITDTLTQFSRKDQATPVALALQGLLELCRAEVVDIRSTWKALSPKLCCD
TRPLVLNVTAELLALIPALNVKTEEYEKFRNEAVNVLWGYALSQDPEVASHGFKALSEFP
EPSHTILHLPEQARPVPKQPDSEDEGEENENEEKDEDISVPGASYVKLVRLTARPVLAAL
ETFLTALVRQEMSQMPRGVYHSALSGGNLRSDQGKTVSGIPSFMLKTYEKNKQPGLKPGL
AAGLLLCYDLPVQTDKDGRPITRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAW
RGFMSRAYHAVLQGRKAELEMLQKQGKESPEELQYKQHCAWLWVRDKLTDVVKSAAKDSP
VVQGNSILALSGLAVVLTRYESNLPAQSESGPEVGPDILPTAHWLSMVIDTLLSIVSSNS
NPKGQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVMSRRESVPAILGTLAAGLP
GSPTADESQAVQFHGGLTLGMFLAWLHDERVSDISGQSVTELLMKHLEPLEACTFNHNLE
YNAGCVLGVGLVLSSLSCSSQSERDRAHVSLTLDKLLQTLQDSSSMGRMLQEVLAYSVAC
VGVSAFSSGIIEAIKAEEIMNTLRSLTEESQQTPGFALALGLTVYGLSSCGHGKAVDIQP
RLLAAWTKILLAEGCPTMQRLSALNGLIALVGSETALIQLKSESEQSSQQQGRLNEVIRA
ITQIITFSGTIGLQSNGACLLGHLHLAHMSSSQSRTAVPQDFGYLPEKSVIRASVDFITE
AGRKGPEFTPPHLVKTVLAALGTVGGSFQYPPVNWSAILSPLMRLNFGEEVQHHCLELAA
SQVQSSQSASLFLGIWLAPPLVHSLSLRTRAHLYKCLSCWMKHVAEDKLQVYVDSLAAQQ
FDPDTRPQRLPLCLSILHGLSKAMTVPNPPQNCWTTLCSTTEKIYNLLPDNIQAGEVHLY
EEICSCLSEMSDTEIDRIVKVTEANVEKTAFILSYLTSKGRVPLLSLNDVISTILQVGNK
KQISWLLLQGLHQSRFASSPNTGVSKRMEWLLDLMGHIRNVAYGSPTVKCVNVLEGTDFL
LSVFAAAVVSWADHCVPLLVGIRAQWFPWRQSSQTSELSHDLYVNPVTTELSVSSCLLGI
PSSMKQLLAKEPWKSQSQKFIDWLFSITEGPVQGFSKTSILTAKANLMALRSTPEFKKKT
VWTRAYGW
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaatttgaagacgagatttgagttccccagctccctcattcaagctcaggct
gtgaggacattggttgctgcagtgcttaaggagaaaggtcaaaatgaaaggatttgtcag
tcctcgactaaaagtctagcactggagtcactgtgggagcagtgcagtagtgatagtaca
gtcgtccgctcagcatgctgtgatgcactggtgctgctcgtggagcagggacatgcagat
ttgcagtatgtgctcaacaccaccctcaacctcctgccctctgcaaggaatgttcaaggg
ctgataaaagtggttgggaggctactacagattcaagcaagtcagcgaaataccgacgca
aactttacctgtccttattcaattaggagcttccctcatccttacattacagtgctggag
aaccgtcccgactgctggcccgctctactccaggagattgatgacttcattcagctcgct
tctgacaaagatgagccagtatttgtggaaatgctgtctcctttcctccgttacctgtac
tgtgagcctcagaggttgtcagaaaatgccctgctcagacacagtctcctcagggtcctg
ctcatgccacgaggggctactcagtctgacagccagcagggaaaggggactctcagcact
agggtggtccgtgagatgatacgcagcctctgtaacctgcttccgtacatgctggtggac
agcgtaacagcagtggtggagttcagctcatttgctgagtctctgacctcagctctgctc
acagatcctggcttctggaggaaggaactgacccagctcgcacttcagctcttgtgtgcc
tgtcagctcagtgtgcagctgggaggagagctcatgtctctcctgcacacactccaccag
ctaatacctgctaatgcagaggacatcccatctgagcaagtgatcatgggaatctccctg
ctcttgctaaaagcctccacctctcagcaaactgccctcctagagctcgctgtgaagatt
gtcccacctgagatatcacctccctggggcgcatctctgctggtgatgcccttgttgcag
gtgctgtcatgctccaccctcatggaggctctaacagacacccaaatacacatgaagaac
cttaaactggccaattcactgttgcagatggttcagagagaaccttccattcgaaaagag
aactccacacaactgactttgcctttcagcacatggtacagtgaacttcaggtggccacc
agcgtcctacaccgaatttccatggactcaatgtctgctgtggaatggctttactccctc
cagtcttcactctctgtctgcgagcatgtcccagatactgtttgtctgctggtctcccac
cttattatcagcagtcacggggacctctgcaggttagcgctggacgcagctgccgccata
gctgagagcgatcctgcaaaggtgccaggtctacttcctgtccttatgtttaaactgggc
agagtgtccgattcagctttgtctcactctgttctctacactgtgccaagactgggaaca
cacaagttctgtattcctcaggttcttcatgtacttcagactttgggcagttcacccaga
ctgaggcctgtggctctgcggcttttagctcttttatggcaaaaacaggaccgtgtatat
ccagacctgcagagactgatgtcacagcttgaaagatcctctgtggtcattggaaaagag
actcagtgggagcagattttggctagggcggcctgtgtcagggacatctgcagggagagg
ccgtaccagcatggaggagacatgctggccgccatcactgacacactgacacagttctcc
aggaaggatcaagccacccctgttgctctggcactgcaaggcttactggagctctgtaga
gctgaggtagttgatatcaggtctacatggaaagctctctctcctaagttgtgctgtgat
accagacccctggttctaaatgtcaccgctgaactgctggcattgatacctgctttgaat
gtcaaaacagaagaatatgagaagttcagaaatgaggcagtcaatgttttatggggctat
gctcttagtcaggacccagaggttgcaagccatggtttcaaagccctctccgaattccct
gaaccttcccacactattttacacctaccagagcaggccagacctgttccaaagcagccg
gacagtgaggacgaaggggaagaaaatgagaatgaggagaaagatgaagatatttcagtg
ccaggggcatcatatgtgaagctagttcgactcacggcaagaccggttttagcagccctt
gagacgttcctaacagcactagtgaggcaggagatgagtcaaatgccccgtggagtgtac
cattcagccctgagtggaggaaatttgcgctctgaccagggaaaaactgtgtctggaatt
ccttctttcatgttgaaaacatatgagaagaacaagcagccaggattgaaacctggttta
gcagctgggcttctgctctgttatgaccttcctgttcagactgacaaagatggacgccca
attacccgcttccttgtcagcagagggcggagctatcaacaaatgttagccacccttatt
catgaggtgaacatccagccatctgagtggcaccgttctctgctcttgccccaggcctgg
cggggcttcatgagccgtgcttaccatgcagttctccagggtcgaaaggcagagctggag
atgctacaaaagcagggtaaagagagtccagaagagctgcagtacaaacagcactgtgcc
tggctctgggtcagggacaaactaactgatgtggtcaaatctgctgccaaagacagtccg
gttgttcagggcaattctatcctggcattaagtggtctggctgttgtattaaccagatat
gagagcaaccttcctgctcagtctgaaagtggacctgaggtgggtccagacatcctgccc
acggctcattggctgtctatggtgatcgacactctgctcagcattgtgagcagtaacagt
aaccctaaaggacaagtcttcccttggttcattcatcgctcttactccggtgaaaacact
gctagtgtgatcgcccggtcctgtgctgctctgggtctggcactgctggtgcccgtgttg
gtgatgtcacgcagagagagtgtgcccgctatactgggcacactagcagcagggctgccg
gggtcgcccacggcagacgaatctcaggcagttcaattccacggcggactgactctgggc
atgttcctagcgtggctgcatgatgaaagagtcagtgatatatctggacagtctgtgacg
gagctgctgatgaaacatcttgagcctctagaagcttgcactttcaatcacaatctggag
tacaatgctggttgtgtgttaggtgttgggttggtgctgagttctctgagctgcagtagt
cagtctgagcgtgatcgtgcccatgtttctctgactctggacaaactcctgcagacactg
caggacagcagcagtatgggccgcatgctacaggaggttttggcctattctgtggcgtgt
gttggtgtatcagcattcagctctggcattattgaggccattaaagcagaggaaatcatg
aacacacttcgctctctgacagaggaaagccaacagacaccaggctttgctttggcattg
ggactgacagtgtatggtctctcttcctgtggtcatggtaaagctgtggacatccagcct
cgcttgttggctgcctggaccaagatactgctggcagagggttgtcccacaatgcagagg
ctgtctgccctcaatggactgatcgcattagtgggatcagagactgctctcattcagcta
aagagtgaatcagagcaatcttctcagcagcagggcagactgaatgaggtcatacgagcc
attacacagatcatcactttctcggggacgattggcctgcagtcgaacggggcatgtctg
cttggacacctgcatctggcccacatgtccagtagccagagtcgaactgcagttcctcaa
gactttggttacctcccagagaaaagtgtcatccgggcaagtgtagacttcatcactgaa
gcaggaaggaaagggcctgagttcactcctccacacttagtaaagacagtgctagcagca
ttaggcacagttggcggaagcttccagtatcctccagtcaattggagtgccattctctcc
ccgctgatgagactcaactttggtgaggaggtgcagcatcactgtttagagttagccgcc
agtcaggtccagtcctcccagagtgcttcacttttccttgggatttggcttgcacctccc
ctggttcatagcctgagtctccgcaccagggctcatctgtacaagtgcctgagctgttgg
atgaagcatgtggctgaagacaaactgcaggtgtatgtggacagtcttgcagcccaacag
tttgatccagacacacgtccccagcgcctccccctctgcctctccatcctgcacggcctg
tccaaagccatgactgtccccaaccctccccagaactgctggaccaccctttgctctacc
actgaaaagatctacaacctcttacctgacaatatacaggctggcgaggtgcacctgtat
gaagagatatgttcatgtctgtctgaaatgagcgacacagagatagaccgtatagtcaaa
gtcactgaggctaatgtggaaaagacagctttcatcctatcctacctgacttctaaaggc
agagtccctctccttagtctcaatgatgtcatcagtaccattctccaggtgggcaataag
aaacaaatcagctggcttctcctccagggcctccaccaatcacgattcgcctctagtccc
aatacaggtgtctctaaaagaatggagtggctattggacttaatgggccatatcagaaat
gttgcatacggatctcccacagttaaatgtgtcaatgttttggagggaacagacttcctc
ctcagtgtgtttgcagcagcagttgtgtcttgggccgaccattgtgtgccacttctcgtt
ggcatcagagcccagtggtttccatggcgacagtcctctcagacatcagaactgtcccat
gacctctatgtcaaccctgttaccaccgagctgtcagtgtcatcatgcctacttggaatc
ccttccagcatgaagcaactgcttgccaaagagccatggaagtcccagtcacagaagttc
atcgactggctcttcagtataactgaaggtcctgtgcagggtttctccaagacttccatt
ctcactgccaaggcaaacctaatggctctgagatccacccccgagttcaagaagaagact
gtgtggactagagcgtatggctggtga
DBGET
integrated database retrieval system
