KEGG   Myxocyprinus asiaticus (Chinese sucker): 127450629
Entry
127450629         CDS       T08782                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013  Nucleocytoplasmic transport
masi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:masi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127450629
   03015 mRNA surveillance pathway
    127450629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:masi03019]
    127450629
Messenger RNA biogenesis [BR:masi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127450629
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 127450629
NCBI-ProteinID: XP_051570827
LinkDB
Position
13:complement(40357858..40387481)
AA seq 774 aa
MADRRRRRRRASQDSEEEDESASGSESGRASSAGRKPHGKDPEPVETPAERVVVKSDDES
ECESEDGVGEAVLSDYDSADLEENGSHTEGGDDEEEGEHFSDEEASRPAVEQKPAADAPT
EEIEEEEKDGGTKKVKMDEKGNLAGERQSGDGQESTDDPENKSASIGGQKLDDDEDRKNP
AYIPRKGLFFEHDVRGQAQEEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREELIALY
GYDIRNGTGPSEERSYRTRKPRYAGSPNREPRRHRDGEKSVRTTWQGPPPGHRNTHQSVT
IQSGLPSAVPAAPKPTGRPSTQPPHRSFQGSRAPTAPHRTEGRGHPKANLDGPPPRGVRP
QPVEGERGPRVRGRGFHATHTDRSPALLVEDIHSEEEDEGEIPTATTTYTAHHYKNERER
VPSPRKQEPGPTVEGGSAAGQVRESSPPQERPVEKKSYSLARRATRTRPSDLGKQASLDD
SSPAVQQAPTAVKSESWQEQGDAGTQGGLTGLDQDLARLSLAGQNWAQNPPSYLQAEMRG
IRSSMHMGGGPPQYGNIEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHYYEPMSFQ
GPIYTHGDNPAALPPQGMLVQPEMHLPHPTHPGHPGLHPHQSGGPIPNPALYAAPPVSIS
PGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQSQVYGGVTYYDTVQ
QQAQPKRSPPRRSSHPVTVRPPPPEFPMRSKSLWWRSDSPQSGWQRTNLSCLHV
NT seq 2325 nt   +upstreamnt  +downstreamnt
atggccgaccggcggcgacggagacggcgcgcctctcaggacagcgaagaggaggacgag
tccgcatcgggttccgagagcgggagagcctcttcggccggcaggaagcctcacggaaaa
gatcccgagccggtggaaacgccagcggagcgcgtggtcgtcaaaagcgacgatgagtct
gagtgtgaaagtgaagatggcgttggtgaagcagtgctatcagactatgacagtgctgat
ctggaggagaatggatcgcacactgagggaggagatgatgaagaggagggtgagcatttc
agtgatgaagaggcctcacgacctgcagtggaacagaaacccgccgcagatgctccaacg
gaagagatagaggaggaagagaaagatggagggacgaagaaggttaaaatggatgagaag
ggcaatctggctggggagcgacagagtggagatggacaggaaagcacagatgaccctgag
aataaatcagccagtataggcggccagaagttggacgatgatgaggacagaaagaatcca
gcgtacatcccccgaaaaggccttttctttgagcatgatgtgagaggccaagctcaggag
gaggagaggcctaaaggcagacacaggaagctgtggaaggacgagggccgctgggaacat
gacaagttccgtgaagaggagcaggcaccaaaatcccgcgaagagcttattgctctttat
ggttatgacatccgcaatggcacagggccaagtgaggaacgatcgtacaggacacgaaaa
ccgagatatgctggttcacccaatcgtgagccaaggcgccaccgtgatggtgaaaagtct
gttcgtaccacgtggcagggtccccctcctggccaccgcaacacccatcagtctgttacc
atacagtccggcctgccctccgctgtccctgctgcacctaaacctactggacgaccctca
actcagcctccccatcgcagtttccagggcagccgagctccaacagccccacacaggaca
gaaggtcgaggacacccaaaggcaaacctggatggcccgccacctcggggagtacggccg
cagcctgtggagggtgagaggggtccgagggtaaggggccgtggctttcacgccactcac
actgaccgcagcccagccttgctggtggaagacatccacagcgaggaagaggatgaaggt
gagattccaacagcaacaactacgtacaccgcacaccactacaagaatgagagagagagg
gttccatcaccacgtaaacaagagccgggcccaacagtggaagggggcagtgcagccggg
caggtgcgagaatcgtctccacctcaagagagaccggtggagaagaaatcgtactcgctt
gcacgtagggcaacgcgaacgcggccgtctgaccttggtaaacaggcgtcattagatgac
tcttcgccggcagtgcagcaagcccccacagcagtgaagagcgaatcgtggcaggagcag
ggtgatgcaggcacacaaggtggactgacggggcttgatcaggacctcgcccgcctcagc
ctagcagggcagaactgggcccagaacccgccctcctacctgcaggctgagatgaggggc
atccgtagttctatgcacatgggaggaggccctccacaatatggaaatatagaggatatg
ggtgtcggtggtggcagagctaagcggtattcgtcacagcgtcagaggccagttcctgag
cctgcacccatgcacataggagtgatggagggccattattatgaacctatgtctttccaa
ggaccaatctacacacatggggacaacccagcggctctgccccctcaaggcatgctcgtt
cagcctgagatgcatctgccacaccccacccaccctggacacccaggcttgcatccgcac
caatcaggagggcccatccccaatccggctctttacgctgctccgcctgtttctatttca
cctgggcaaccacctccacaacagctgctacccccacccttctatccaccaccaggtgtc
atgacctttgggaacaccaactacccataccccgccggagctacgctacctccaatgtac
cccaatccccaggcacagtcacaggtctatgggggcgtaacgtactatgatacggtacag
caacaagctcagcccaaacgctccccgccccgacgttcctctcatccagttacagtcaga
cctccccctcctgagttcccaatgcgctccaagtccttgtggtggcgtagtgactcgcct
caatctgggtggcagaggacgaatctcagttgcctccacgtctga

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