Myxocyprinus asiaticus (Chinese sucker): 127450629
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Entry
127450629 CDS
T08782
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127450629
03015 mRNA surveillance pathway
127450629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127450629
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127450629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
127450629
NCBI-ProteinID:
XP_051570827
LinkDB
All DBs
Position
13:complement(40357858..40387481)
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AA seq
774 aa
AA seq
DB search
MADRRRRRRRASQDSEEEDESASGSESGRASSAGRKPHGKDPEPVETPAERVVVKSDDES
ECESEDGVGEAVLSDYDSADLEENGSHTEGGDDEEEGEHFSDEEASRPAVEQKPAADAPT
EEIEEEEKDGGTKKVKMDEKGNLAGERQSGDGQESTDDPENKSASIGGQKLDDDEDRKNP
AYIPRKGLFFEHDVRGQAQEEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREELIALY
GYDIRNGTGPSEERSYRTRKPRYAGSPNREPRRHRDGEKSVRTTWQGPPPGHRNTHQSVT
IQSGLPSAVPAAPKPTGRPSTQPPHRSFQGSRAPTAPHRTEGRGHPKANLDGPPPRGVRP
QPVEGERGPRVRGRGFHATHTDRSPALLVEDIHSEEEDEGEIPTATTTYTAHHYKNERER
VPSPRKQEPGPTVEGGSAAGQVRESSPPQERPVEKKSYSLARRATRTRPSDLGKQASLDD
SSPAVQQAPTAVKSESWQEQGDAGTQGGLTGLDQDLARLSLAGQNWAQNPPSYLQAEMRG
IRSSMHMGGGPPQYGNIEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHYYEPMSFQ
GPIYTHGDNPAALPPQGMLVQPEMHLPHPTHPGHPGLHPHQSGGPIPNPALYAAPPVSIS
PGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQSQVYGGVTYYDTVQ
QQAQPKRSPPRRSSHPVTVRPPPPEFPMRSKSLWWRSDSPQSGWQRTNLSCLHV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccggcggcgacggagacggcgcgcctctcaggacagcgaagaggaggacgag
tccgcatcgggttccgagagcgggagagcctcttcggccggcaggaagcctcacggaaaa
gatcccgagccggtggaaacgccagcggagcgcgtggtcgtcaaaagcgacgatgagtct
gagtgtgaaagtgaagatggcgttggtgaagcagtgctatcagactatgacagtgctgat
ctggaggagaatggatcgcacactgagggaggagatgatgaagaggagggtgagcatttc
agtgatgaagaggcctcacgacctgcagtggaacagaaacccgccgcagatgctccaacg
gaagagatagaggaggaagagaaagatggagggacgaagaaggttaaaatggatgagaag
ggcaatctggctggggagcgacagagtggagatggacaggaaagcacagatgaccctgag
aataaatcagccagtataggcggccagaagttggacgatgatgaggacagaaagaatcca
gcgtacatcccccgaaaaggccttttctttgagcatgatgtgagaggccaagctcaggag
gaggagaggcctaaaggcagacacaggaagctgtggaaggacgagggccgctgggaacat
gacaagttccgtgaagaggagcaggcaccaaaatcccgcgaagagcttattgctctttat
ggttatgacatccgcaatggcacagggccaagtgaggaacgatcgtacaggacacgaaaa
ccgagatatgctggttcacccaatcgtgagccaaggcgccaccgtgatggtgaaaagtct
gttcgtaccacgtggcagggtccccctcctggccaccgcaacacccatcagtctgttacc
atacagtccggcctgccctccgctgtccctgctgcacctaaacctactggacgaccctca
actcagcctccccatcgcagtttccagggcagccgagctccaacagccccacacaggaca
gaaggtcgaggacacccaaaggcaaacctggatggcccgccacctcggggagtacggccg
cagcctgtggagggtgagaggggtccgagggtaaggggccgtggctttcacgccactcac
actgaccgcagcccagccttgctggtggaagacatccacagcgaggaagaggatgaaggt
gagattccaacagcaacaactacgtacaccgcacaccactacaagaatgagagagagagg
gttccatcaccacgtaaacaagagccgggcccaacagtggaagggggcagtgcagccggg
caggtgcgagaatcgtctccacctcaagagagaccggtggagaagaaatcgtactcgctt
gcacgtagggcaacgcgaacgcggccgtctgaccttggtaaacaggcgtcattagatgac
tcttcgccggcagtgcagcaagcccccacagcagtgaagagcgaatcgtggcaggagcag
ggtgatgcaggcacacaaggtggactgacggggcttgatcaggacctcgcccgcctcagc
ctagcagggcagaactgggcccagaacccgccctcctacctgcaggctgagatgaggggc
atccgtagttctatgcacatgggaggaggccctccacaatatggaaatatagaggatatg
ggtgtcggtggtggcagagctaagcggtattcgtcacagcgtcagaggccagttcctgag
cctgcacccatgcacataggagtgatggagggccattattatgaacctatgtctttccaa
ggaccaatctacacacatggggacaacccagcggctctgccccctcaaggcatgctcgtt
cagcctgagatgcatctgccacaccccacccaccctggacacccaggcttgcatccgcac
caatcaggagggcccatccccaatccggctctttacgctgctccgcctgtttctatttca
cctgggcaaccacctccacaacagctgctacccccacccttctatccaccaccaggtgtc
atgacctttgggaacaccaactacccataccccgccggagctacgctacctccaatgtac
cccaatccccaggcacagtcacaggtctatgggggcgtaacgtactatgatacggtacag
caacaagctcagcccaaacgctccccgccccgacgttcctctcatccagttacagtcaga
cctccccctcctgagttcccaatgcgctccaagtccttgtggtggcgtagtgactcgcct
caatctgggtggcagaggacgaatctcagttgcctccacgtctga
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