Myxocyprinus asiaticus (Chinese sucker): 127450849
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Entry
127450849 CDS
T08782
Name
(RefSeq) ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127450849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127450849
03009 Ribosome biogenesis [BR:
masi03009
]
127450849
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127450849
Spliceosome [BR:
masi03041
]
Complex A
U2 snRNP components
U2 related factors
127450849
Complex B
127450849
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127450849
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
90S particles
Helicases
127450849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
Flavi_DEAD
AAA_25
Atrophin-1
AAA_29
DUF3915
nSTAND_NTPase5
AAA_7
Motif
Other DBs
NCBI-GeneID:
127450849
NCBI-ProteinID:
XP_051571222
LinkDB
All DBs
Position
2:complement(13795339..13846832)
Genome browser
AA seq
766 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDDRSKDRERDRDRDRDRDRDRERDRDSKAP
SVALISSLPGGGGMIPLKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDI
LTRHQSFVLVGETGSGKTTQIPQWCVDMVKSLPGPKRGVACTQPRRVAAMSVAQRVADEM
DVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLAT
DILMGVLKEVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPER
DYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLY
STLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP
RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGS
VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEYPLDP
QLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLN
VYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINI
RRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRT
CTDIKPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggcatcgattggatttaggcgatgattattcgtcgagtaaaaagagatct
tctgacggaaaggaccgtgatagagatcgggacgaccggtcgaaggatcgtgagcgtgac
cgcgatagagacagagaccgtgatcgggaccgagagagagatagagacagcaaggccccg
agtgtggcccttatctccagtttgcccggtggtggtgggatgattcctttgaaacagacg
gctatgcaacagcagatcaaccccttcaccaacctgccccacacaccacgatactacgag
attctcaagaagaggctgcagttgcctgtctgggagtataaggaacgctttaatgatatc
ctcacccgtcatcagagcttcgtgctggttggagagacaggctctggaaagaccacacag
atcccacagtggtgtgtagacatggtgaagtctctcccaggccctaaacgtggtgtagcc
tgtacacagccacgtagggtggccgccatgagcgtggcacagagggtggcagatgaaatg
gacgttatgctgggacaggaagttggatactccatcagatttgaggattgtagctctgca
aagaccatactaaaatacatgacagacggtatgttgctccgtgaggctatgaacgacccc
ttgctggagcgttatggtgtcatcattcttgacgaggctcacgagcgcacgctagccaca
gatattctgatgggcgtccttaaagaagtggtccgtcagaggaatgaccttaaggtcatc
gtaatgagcgccacgctggatgctggaaagtttcaggtatatttcgacagctgccccttg
ctgaccattcctggccggacgcatcccgtggagatcttttacacgcctgagccagagagg
gactacctggaggcagcaattcgcacagtcattcagatccacatgtgtgaggaagatgag
ggagatgtactgcttttcctcaccggacaggaggaaattgatgaagcctgcaagcggatc
aaacgtgagattgatgatctgggccctgaggttggagatatcaaaatcatcccactctac
tccacgctgccgccacagcaacagcagaggatctttgagccacctccaccccgcaaaccc
aacggagccatcggcaggaaggttgtggtttctacaaacatagccgagacatccctgacc
atcgatggcgtggtgtttgtaattgatcctggctttgccaagcaaaaggtgtataaccct
cgcattcgagtcgagtcgcttcttgtaacagctattagtaaggcttcagcccagcagaga
gcaggtcgtgctggacgtacacgcccaggaaagtgcttccggctctacaccgagaaggcc
tacaagactgagatgcaggataacacataccctgagattcttaggtccaatttgggctct
gtggtgctacagctcaagaagcttggtattgatgacctggtgcactttgacttcatggac
ccaccagctcctgagacgctaatgcgagctctggagctgttgaactatttggctgcgctg
aatgatgacggtgacctgacagagctgggctccatgatggcggagtaccctctcgacccc
cagctcgccaagatggtcatcgctagctgtgaattcaactgctcaaatgagatcctctcc
attactgcaatgttatcagtcccacagtgctttgtgcgccccaccgaagccaagaaggct
gctgacgagtccaaaatgaggtttgcccacatcgacggggaccacctgaccttgctcaac
gtctaccatgccttcaagcagaaccatgagtctgtgcagtggtgctatgataacttcatt
aactaccgctcactgatgtcggctgataatgtgcggcagcagctctctcgcatcatggac
cgcttcaacctgccacgtcgcagcacagagttcaccagccgagactactacatcaacatc
cgccgtgctcttgtcacaggcttcttcatgcaggttgctcacctggagcgcaccgggcac
tatctgacagtgaaggacaaccaggtggtccagttgcacccatctaccgtactggaccac
aagcctgagtgggttctctacaacgagtttgtgctgaccaccaagaactatatccgcacc
tgcactgatataaaacctgaatggctggtgaaaattgctccacaatactatgaaatgggc
aacttccctcagtgcgaggctaagaggcaattggagcgcatcgtcgctaaacttcaaacc
aaggaatactctcaatactga
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