Myxocyprinus asiaticus (Chinese sucker): 127451030
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Entry
127451030 CDS
T08782
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127451030
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127451030
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
U-box type E3
127451030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Siva
Motif
Other DBs
NCBI-GeneID:
127451030
NCBI-ProteinID:
XP_051571466
LinkDB
All DBs
Position
13:complement(25607175..25625803)
Genome browser
AA seq
1764 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTNEEYTDD
GALIPKNSSVIIRRIPIGGVKSTSKTFVIDRSEPSSGSSKAIDDSSISLALLSKTANLAE
TNASEEDKIKAMMSQSNHDYDPIHYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDRS
FEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGAYAIPTIDAEAYAIGKKEKPPFLPQ
NQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESEEHVCPTCKQ
SDVSPDALIANKFLRQAVNNFRNETGYTKRIRKATAAQVTVQGAQAQAPVQRPPLRLATS
RQQDPLMANVPSSTAASTPPQSTLAAASSPASTHQPSSTPPSTSSCNVQSSSTPAVNSPQ
RSTKQDDLPLSKEEPASEVPAPSVVPSSETFVPTTSAGPKGFHVSVIGQPNMPPHLMQRQ
GPPRASGPRSTGSRPPWDPSSSRGRPPSERPPRTQQPPPVQNLPPVVPPVFVPPLFPPPP
HPMPQPPGVVPQQYPMQYPPGPQPPPPYNIPPPVFPPVPPNVQAPWVAPGTQPPVANPIS
NMPTASFLSKEEFYRQQRRLKEDSQCRFVTREKSKLEEFTNDFAKELLEYRKMQKDRRRS
YSRSKSPYRGSSYSGSSYSYSKSRSRSRSPRSYSRSLSRSRSRSRSRSRSRSYSRSPYSR
RGRGRSRSYRSRSRSPAFHRSRSRSPSYRGRDVSGMGSGVYRSRSRSPVYRNHSPSKKLP
PPSKMEGERKYTGRYRELPPYDAKAYYGRNVDQSDPYEREQYREWEREYREWYDNYLKSY
SNPPGGHPRSRGPNSRDHYTPERFAPPRPRDNSPYSRGHRDDYPPPSQSHGVPPRGRVSM
TYQEKCAEKYGHLHINTGAGKGIKDSLKPLKDREHSGSTATDTKTMKHKKHRKKKRDDGE
PFSHSDSMDDSRKEDCKGDPMMMNSSRDDATPVRDEPMDSAAVPYKSVPEKEKKEKTKSK
TDKVKRKSESSGQKEISGKVTKPAKEEVADALREKVAPIEPAIKRVQEEPSHKPEATRPQ
FIESKLMLPRKLMQSRPIKHHQELKSVKDELKGKKELVKDLAKLDKVPSKDGKVKKELEK
PVKTEKIPTKAVDTKHDKKKRKDDKPSVKDLDIPPVKVAKMEVTGKVRGSPKPKPRLESE
IAVEEKVVIPSLMDIKPEPLRKIKINREIGKRIIGIERPISAEDSAHATGKGRLDKSRGK
LRRKVHTPDGSGSMLVDYNSTSSTGGSPIKKHEEKLDLKKTVVKTLEEYTNDSSTPAEDE
IVMIQVPRSKWEKEDYESEDDDSKGTTGTRIVSMSSSAPVSENTAPKSTNKESPRADNAP
SASKDSQADVKLAKDSTPGDKEKDIDKEKDKERDRDRGKERDRSTTDCEVTDKRKPSVPN
QERERGSDHGSERSSSSHSSRDRLADRSEPNSRKPAGRDTTTSLINRKPDHRDDARDHLS
SRSRDERGPIRRNASLSPPSRVKDLHTDSVRKCLEVSQESQSPIRDKRTSSQNTLEPKRT
GPEDHKSLCKESQSSRHSDLRPTKDREHRTHTAANLEPRADTEKGGTHGDHIKIPAARST
RLSSDLARETDEAAFVPDYSESESETSDFESKVEQRGRERDSSGSQSPSPSGSHGHSSSP
SSPGSQDSKKKKKDKKEKKERKKHKKHKKHKKHKKHTSNESEAELKGQKHKHKKKKSKKS
KDKDKDDKEKDENGKEEHGTKVSV
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaactgaactacgacactgtcaccttcgat
ggccttcacatcacgctcagtgatttgaaacgtcaaatcatggggcgagagaagctgaag
gccgcggactgcgacctgcaaatcaccaacgcgcaaaccaacgaggaatacactgatgat
ggagccctcatccccaaaaactcgtctgtcatcatcagacgaatccctattgggggggtc
aagtccacaagcaaaacatttgtcattgatcgatctgaaccatcaagtggatcttcaaaa
gcaattgatgattcttccatttcactggccctgctttcaaagacagccaatcttgctgaa
acaaatgcatcagaggaagacaaaataaaagcaatgatgtctcagtccaaccatgactat
gatccgattcactatgcaaagaagcttgttggtccacccccaccaaactacacgtgtttt
cgttgtggaaaaactggacattacatccgaaactgtccaacaaatgggcaggatcgaagt
tttgaagctcctcaacggataaagaaaagcacaggaattcctcggagtttcatggtggag
gtagatgatccaaacagaaagggagtcatgctgaccaacagtggcgcatatgccattccc
actattgatgctgaggcttatgctattgggaagaaagagaagccacctttcttgccgcag
aatcagtcttcatcctcagaggaagaagatcctgtgcctgatgagctgctgtgtctgatc
tgcaaggatcttatgactgatgctgtggttatcccctgctgtggaaatagctactgtgat
gagtgtattcgtacatgtttgctggagtctgaagaacacgtttgccccacctgcaaacag
tcggatgtatctcccgatgctttgatagcaaacaagtttttgcgccaagcagtgaataat
tttaggaatgaaactggatacaccaagaggattcgcaaagctactgctgctcaagttact
gtacaaggagcccaagcgcaggctcctgtgcagcggcctcctctgaggctggctacttcg
cgccaacaggaccctctaatggccaatgttccgagctcaacagctgctagcactcctccc
caaagcacgctggctgctgcctcgtctcctgctagtactcaccagccttccagcacccca
ccttctaccagcagctgtaacgtgcaaagtagtagcacacctgcagtgaactctcctcag
cgctctacaaagcaggatgacctgccattgtccaaggaggaacctgcatctgaggtcccc
gcaccttctgttgtgccttcatcagagacctttgtgccaacgacttctgctggtccaaag
gggttccatgtctctgtaattggacagcctaatatgcctccacatctcatgcaaagacaa
ggaccgccaagggctagtggaccacggtcaactgggagccgccctccatgggatccgtcc
tcaagtagagggagacctcctagtgagcgaccaccaaggacacagcaacctccaccagtg
caaaaccttccccctgtagtccccccagtgttcgtgcctcctctctttccacctccacca
cacccaatgcctcagccaccaggtgttgttcctcagcaatatcccatgcagtatcctcca
ggaccacagcctccacctccctacaacattccaccgcctgtctttccaccagtcccacct
aatgtgcaggctccgtgggtagctcctggcacccagccacctgtagccaaccctatctcc
aatatgccaacagcatcttttctgtccaaggaggaattttacaggcagcagcgcagactg
aaggaagattcccagtgtcgattcgttaccagggagaagtctaaacttgaggagtttact
aatgactttgccaaagagcttttagagtacagaaagatgcagaaggacagaaggcgatca
tactctagatctaaatctccatacagaggctcctcctacagtggctcatcatattcctat
tccaaatctcgctcacggtccagatcaccacgctcctactctcggtcattatcccgatct
agatcccgttcacgctctcgttctcgatcaagatcctactctcgctcaccatactcccgc
agaggccgaggtcgcagccgtagctatcgttccaggtcacgcagtccagcattccatcgc
tcccgcagcagatcgccatcatataggggccgggatgtgagtgggatgggcagtggagtc
tatcgttcccgttccagatcgccagtgtataggaatcacagtcccagcaagaaactccca
ccaccttctaaaatggagggtgaacgaaaatacactggcaggtacagagagctgccacct
tatgatgctaaggcttattatggccgcaacgtagaccagagtgacccctacgagagagaa
cagtaccgagagtgggaaagagagtacagggaatggtatgacaattacctcaagagctac
agcaacccacccggtggtcacccacggagccgtggtccaaacagcagagatcactatacc
cctgagcgttttgcccctcctcgaccaagagacaactccccctacagtaggggacatcgg
gatgattacccaccaccttctcaaagtcacggtgttcctccgagaggccgcgtttccatg
acatatcaagagaagtgtgctgagaagtatggccacctccacatcaacactggtgctggt
aaaggaattaaagactctttgaaacctcttaaagacagagaacatagtggcagcactgct
acagacacaaagactatgaaacataagaaacatcgcaaaaagaagagggatgatggtgaa
cccttcagccactctgactctatggatgattccaggaaagaagactgcaaaggagacccc
atgatgatgaattcaagccgtgatgatgccacacctgtcagggatgaacccatggacagt
gctgctgtgccctacaaaagcgtccctgaaaaggagaagaaagagaagactaaaagcaag
actgacaaagttaaacgaaagtctgaaagcagtggacagaaggaaatttcagggaaggtg
acaaagcctgccaaagaggaggtggcagatgcactgcgtgaaaaggtggctccaattgaa
ccagctattaagagagtccaagaagaaccatcacacaaacctgaagcgaccagacctcag
ttcattgagtctaaactcatgctccctcgcaagctgatgcagtctagacccatcaaacac
catcaagagctgaagtcagtcaaagatgagcttaaaggcaagaaagaattggtgaaagac
ctagcaaagctagacaaagttccttccaaagatggaaaggtcaagaaagagctagagaag
cctgtgaaaactgagaaaattcccaccaaggcagttgacaccaaacatgataaaaagaaa
cggaaagatgacaagccatctgtgaaagacctggacatccccccagtcaaagtagccaaa
atggaagttactggcaaggttagaggctctccaaaacctaaacccaggctggagagtgaa
attgcagttgaggagaaagtggttattccatccctgatggatatcaagccggaaccttta
agaaagattaaaattaacagagaaatcggcaagaggataattgggattgagcgccctatt
tcagctgaagattcagctcatgccacgggaaagggcaggttggataagtcaaggggaaaa
ttgaggaggaaggtgcatactccagatgggtcggggtccatgctggtcgattacaacagc
accagctccacaggtggaagccccatcaaaaagcatgaagagaagctagacctaaagaag
actgtggtgaagaccctggaggaatacaccaatgacagctccacccctgctgaagatgaa
attgttatgatccaagtgccccgctccaagtgggaaaaagaggactatgaatctgaggat
gatgattctaagggaaccactgggactcgcattgtcagcatgtccagctctgctcctgtg
agtgagaacactgctccaaaatcaacaaacaaggagtctccccgtgctgacaatgccccc
tctgcctccaaagattctcaggcagatgtaaaacttgccaaggactccacaccaggtgat
aaggagaaagatattgacaaggagaaagacaaagagagagatcgagacagaggaaaagaa
agagaccgcagcactacagattgtgaggtaacggataaaaggaaacctagtgtaccaaat
caggaaagagaaagaggtagtgaccatggcagtgagcggagctcctcatcccattcctcc
agggacagactagctgacaggtctgaaccaaactctagaaagccagctggtagggataca
acgacgagcctcatcaacaggaaaccagaccacagagatgatgcaagagaccatctaagt
agtagatcgagagatgaaagaggtcctatcaggaggaatgcatcactatccccaccctca
agggtaaaggacttgcacacagactctgtgagaaaatgcctggaagtttctcaggagtct
caaagcccaattagggataagagaacatcatcccaaaacaccttagagcccaaaagaaca
ggtccagaggaccacaagtcattgtgtaaggagagccagagttctaggcattctgatttg
cgtcccacaaaggacagggagcacaggactcatacagctgcaaatctagagcctagggct
gatacagagaaaggtggcacacacggtgaccacatcaaaatcccagctgcgcgctccaca
cgactgtcctcggatttagcacgggaaactgatgaggccgcgtttgtcccagactacagc
gaaagtgagagtgagacctctgactttgagagcaaagtggagcagagagggcgagagagg
gacagcagtggcagccagagtccaagcccctctggaagccacggacatagtagcagccct
agctccccgggcagtcaggacagcaaaaagaagaaaaaggacaaaaaggaaaagaaagag
aggaagaaacacaagaagcacaaaaaacacaaaaagcataagaaacacacaagtaatgaa
tctgaagcagagctcaaaggacaaaaacacaaacataaaaaaaagaagtccaaaaagagc
aaggacaaagataaagatgacaaggagaaagatgagaatgggaaagaggaacatgggaca
aaagtatctgtttaa
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integrated database retrieval system
