Myxocyprinus asiaticus (Chinese sucker): 127451769
Help
Entry
127451769 CDS
T08782
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127451769
03015 mRNA surveillance pathway
127451769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127451769
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127451769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
ALGX
Motif
Other DBs
NCBI-GeneID:
127451769
NCBI-ProteinID:
XP_051572657
LinkDB
All DBs
Position
14:9897730..9930366
Genome browser
AA seq
751 aa
AA seq
DB search
MADRRRRRRRASQDSEEEDESASGSESGRASSASRKPRGRDPEPVELPAAREVVKRDDES
ECESEDGVGEAVLSDYDSADLEENGSHTEGGDDEEEGEHFSDEEASRPAAEQKPAADAPT
EEVEQEERDGKMKDVKTDEKGNLAGERQSGDGQESTEDPENKSASKGGQKLDDDEDRKNP
AYIPRKGLFFEHDVRGQAQEEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREELISFY
GYDIRNGSGPSEGRSYRTRKPRHAGSPSREPRCHRDGEKSIRSTWQGPPSGHRNTPPSVS
LKSGPPPAPSAAPKPTGRPSTQPPQRSFQGSRAPLAPHRTEGRGHPKPGLDGPPPRGVRL
QPVEGERVPRLRGRGSHVDRSPDMLVEDIRSEEEEEGEIPTATTTYTAHHYKAERERVSS
PRKQEPGPTLEGGSAARQVRESSPLQERPVEKKSYSLARRATRTRPSDLAKQASLDDSSP
TVQQAPTAVKSESWREQGDAGTQGGLTGLDQDLARLSLAGQNWSQNPPSYLQAEMRGIRS
SMHMGGGPPQYGNMEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHYYEPMSFQGPI
YTHGDSPAPLPPQGMLVQPEMHLTHPTHPGLHPHQSGGPMPNPALYAAPPVSLSTGQPPP
QQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQAQVYGGVTYYDTVQQQALPK
RSPPRRSSHPVTVRPPPPEDQSRKPSEEIHS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcgacggagacggcgcgcctctcaggacagcgaggaggaggacgag
tccgcctcgggctccgagagcgggagagcctcttcggccagcaggaagcctcgcggaaga
gatcccgagccggtggaattgccagcggcgcgcgaggtcgttaaaagggacgatgaatcg
gagtgtgaaagtgaagatggcgtaggtgaagcagtgctatcagactatgacagtgctgat
ctggaggagaatggatcgcacactgagggaggagatgatgaagaggagggtgagcatttc
agtgatgaagaggcctcacgtcctgcagcagaacagaaacccgccgcagatgccccaaca
gaagaggtagagcaggaagagagagatggaaagatgaaggatgttaaaacggacgagaag
ggcaatctggctggggagcgtcagagtggagacggacaggaaagcacagaagaccctgag
aacaaatctgccagtaaagggggccagaagttggatgatgatgaggacagaaagaatcca
gcctacatcccccgaaaaggccttttctttgagcatgacgtgagaggccaggctcaagaa
gaggagaggcctaaaggcagacacaggaagttgtggaaggatgagggccgctgggaacac
gacaagttccgtgaagaggagcaggcgccaaaatcacgtgaagaactgatctctttttac
ggttatgacatccgcaatggctcgggtccaagtgagggacgatcgtacaggacccgaaaa
ccaagacatgctggttcacccagtcgagagccaaggtgccaccgtgacggtgaaaagtct
attcgttccacatggcaaggcccgccttctggccaccgcaatactccaccgtctgtttcc
ctaaagtccggccctccccctgctccctctgcagcacctaaacccactggaagaccctca
actcagcctccccaacgcagtttccagggcagccgagcacctttggcccctcacaggaca
gagggtcgaggacacccaaagcccggcttggacggcccaccacctcggggtgttcgattg
cagcctgtggagggtgagagagttccgaggctaaggggccgcggctctcatgttgaccgc
agcccagacatgctggtggaagacatccgcagtgaggaagaggaagaaggtgagattcca
acagcaacaactacatacaccgctcaccactacaaggctgagagagagagggtttcatca
ccacggaaacaagagccaggcccaacgttggaaggaggtagtgcagccaggcaggtgcga
gaatcgtctccacttcaggagagacctgtggagaagaaatcgtactcgcttgcacggagg
gcaacacgaacccggccgtctgaccttgctaagcaggcatcattagatgactcttcgccc
actgtgcagcaagcccccacagcagtgaagagcgaatcgtggcgggagcagggtgatgca
ggcacgcaaggtggactgacggggcttgatcaggacctcgcccgcctcagcctagcgggg
cagaactggtcccagaacccgccctcttacctgcaggctgagatgaggggcatccgtagt
tccatgcacatgggaggaggccccccacagtatggaaatatggaggatatgggtgttggt
ggtggccgggctaagcgatattcgtcacagcgtcagaggccagttcctgagcctgcaccc
atgcacataggagtgatggagggccattattatgaacctatgtctttccagggaccaatc
tacacacacggggacagcccagcgcctctcccccctcaaggcatgctcgttcagcctgag
atgcacctgactcaccccacccacccaggcttgcatccgcaccaatcaggagggcccatg
cccaatccggctctttatgctgccccacccgtttctttgtcaactggtcaaccacctcca
cagcagctgctacccccacccttctatcccccaccaggtgtcatgacctttgggaacacc
aactacccgtaccccgctggagctacgctacctccaatgtaccccaacccccaggcacag
gcacaggtttatggtggtgtgacatactacgatacggtacagcagcaagctctgcccaaa
cgctctccgccccgacgttcctctcatccagttacagtcagacctccccctcctgaggac
cagagcagaaagcccagtgaggagattcattcctag
DBGET
integrated database retrieval system