Myxocyprinus asiaticus (Chinese sucker): 127452326
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Entry
127452326 CDS
T08782
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127452326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127452326
03009 Ribosome biogenesis [BR:
masi03009
]
127452326
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127452326
Spliceosome [BR:
masi03041
]
Complex A
U1 snRNP components
U1 related factors
127452326
Complex B
127452326
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Pre-60S particles
Helicases
127452326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127452326
NCBI-ProteinID:
XP_051573689
LinkDB
All DBs
Position
14:8137646..8143713
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AA seq
615 aa
AA seq
DB search
MPGYSDRDRGRDRGSYSSGPPRFGGSRNGPPPPKKFGNPGDRLRKKHWNVDELPKFEKNF
YQEHHEVSRRSTQDVEHYRRSKEITVKGRDCPKPIMKFHEANFPNYVMDVIDKQNWTDPT
PIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAVVHINHQPFLEHGDGPICLVLAPTRE
LAQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYV
QINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDY
PNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDR
GGRSRGGRGGFRDDRRDRHSGGRRDFNSYGQDSRNGDSYGQKKVFGNKTQNGSSGYNSSG
NGGNSYNSGYSNNGQSNFSGNQAGGYGSQSYQNQQFGANQGGVQNGMSHPPQFPFNPQQM
PQSMPFPMPPPAFPQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccaggatattcagacagagaccgcggtcgtgacagaggcagttacagcagtggtccc
ccacgttttggaggcagtcgaaatggacctcccccaccgaagaagtttgggaatccaggc
gatcggctgcggaaaaaacactggaacgtggacgaactgcccaagtttgagaaaaacttc
taccaagagcaccacgaggtttcacggaggtcaactcaagatgttgagcactacaggaga
agcaaagagattacggtgaagggtagagactgtcccaagcccattatgaagttccatgaa
gcaaacttcccaaactatgtgatggacgtgatcgataaacagaactggactgatccaacg
cccattcaggctcaggggtggccagtggcactgagtggcaaagatatggtcggcattgca
cagacaggatctggaaaaaccctctcgtatttgctccccgctgtcgttcatataaaccac
caaccattcctggaacatggagacggccccatttgtttggtgttggctcctacccgtgaa
ctggcacagcaggtccagcaggtggcagcagagtacggcaaagcatctcgtctcaagtcc
acctgtatctatggaggagctcccaaaggaccacagatccgggacctggaaaggggagtc
gagatctgcatcgccacccctggcagacttatcgattttctggaggttggaaagacaaat
ctgcgcaggtgcacataccttgtattagacgaggcggacaggatgctggacatggggttt
gaaccccagattcgaaaaattttggaccaaattagacctgaccgacagactctgatgtgg
agtgctacctggcctaaagaggttaggcagttagctgaggactttcttaaagagtatgta
cagatcaatgttggagctcttcagctcagcgccaaccacaatatcctgcagattgtggat
gtctgcaatgatggagaaaaagaggataaactgttacgcctgttggaggaaatcatgagc
gagaaggagaacaagaccataatctttgtagagactaagagaaggtgtgatgatctgacc
aggaggatgcgcagggatgggtggcctgcaatgggtatacatggagacaaaagccaacag
gagagggactgggtcctaaatgaatttaaatttggcaaagcccccattctcatcgccacc
gatgttgcttccagaggactagatgttgaagacgtcaaatttgtcattaactatgactac
cccaacaattccgaggactacattcaccgtattggccgtacggctcgaagtcagaaaact
ggaacggcatacactttctttacacccaacaacatgaaacaagcacacgacctggtctca
gtcctccgtgaggcgaatcaagccatcaaccccaaactcatccagatggctgaagacaga
ggaggtcgttcaaggggaggtcgcggtggttttagggatgaccgtcgggaccgccactct
ggtggcagacgggatttcaatagctatggtcaggacagccgcaatggagactcttatgga
caaaagaaggtatttggaaacaagactcaaaacggatcaagcggctacaatagcagtggt
aacggtggtaatagctataacagtggatacagcaataacggacagtctaacttcagtggc
aaccaggctggtggctatggaagccaaagttatcagaaccagcaatttggtgccaaccaa
gggggtgttcagaatggtatgagccaccccccacagttcccctttaacccccaacagatg
ccccagtctatgccctttcccatgccccctcctgccttcccacagtaa
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