Myxocyprinus asiaticus (Chinese sucker): 127452560
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Entry
127452560 CDS
T08782
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127452560
04121 Ubiquitin system [BR:
masi04121
]
127452560
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127452560
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127452560
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127452560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-B_box_Trim66
zf-RING_2
Invasin_D3
Ig_GEX2_N
RE_Eco47II
BBP1_C
DUF4094
Motif
Other DBs
NCBI-GeneID:
127452560
NCBI-ProteinID:
XP_051574057
LinkDB
All DBs
Position
15:complement(34649866..34693531)
Genome browser
AA seq
824 aa
AA seq
DB search
MSEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSSSSSTSSTRR
LHVLPCLHAFCRQCLEGHRNPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLLDVV
VSAEEQGKNGRSSSVVHHGGLLRPQHLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIEGLMESLHLANRTNNSNTPVNISQAFHNSFSMLNVFQERMDFCQQHDNA
VLRFFCDSCAVPICRECSVGRHAGHSFTYLQEALQDSRALTIQLLADTQQGRQAVQLSIE
KAQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKL
HQNLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNHLQELKSLHCILQPQEDDRIMFTPP
DQALLIAIKSMGLISSGAFATASKAHGEGLKRALQGKLASFTVVGYDHDGEPRLSGGDSV
SVVLMSPDGKLSSADVSDHQDGTYTVSYLPKNEGELLLSVLICNQHIEGSPFKVMVKSGR
SYGGIGLPVASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFG
TLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPW
DVAVNSEGKILVSDTRNHRVQLFGLDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVT
DFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPN
GNFLCKFGTHGNGFGQMDRPSGIAVTPDGTIVAVDFGNNRILMF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagttattttgtggtcctctgcacaaatggcgtctttccctgactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcctcttctcagacctccagctcatcatctacctcatccaccaggaga
ctgcacgtcctgccctgtctgcacgccttctgcaggcaatgcctggagggccacaggaac
cccggtgaccctctgaagctcagatgccccacttgtgaccaaaaagtctctctatccgaa
tcaggcgtggacgccctgccctcctccaactttctcttcagcaatctgctggatgtggtg
gtctctgcagaagaacagggcaagaacggtcggtcttcttcggtggtccaccatggtggt
ctgctgagacctcagcacctctcagatcctcagtgcagctcttgtgatgagggtaaccct
gctacctcccactgcctggactgccaggagtacctctgtgataactgcgtgcgggcccac
cagagggtccgactcaccaaagaccacttcatcgaggggctgatggagagcttgcacctg
gccaaccgcaccaataactccaacaccccggtgaacatctcccaagccttccataacagc
ttctccatgctcaatgttttccaggagaggatggacttctgccagcagcacgataatgcg
gtactgcgttttttctgcgacagctgtgccgtgccaatctgtagggagtgtagcgtgggc
agacatgcaggtcacagtttcacctatctgcaggaagcactgcaggactccagagctctg
accatccagctgctcgcagacacacagcagggcagacaggctgtacagctgagcattgag
aaagcccaggccattgccgagcaagtggagctgaaggcaaaggttgtgcagtcagaggtg
aaaaccattactctccgtcataagaaagctctcgaggagcgtgagtgcgagctgctctgg
aaggttgaaaagatccgccaagtgaaggcaaagtcactttacttgcaggttgagaaacta
caccagaatctcaccaagctggatagtaccatcgccacagtgacgcaggtactagaagaa
ggccgtagcatagatgtcctgctagcacgcgagcacatgttaaatcatctacaggagctt
aagtcccttcactgcatcctacagccccaagaagatgatcgcatcatgttcactcctcca
gaccaggcccttctgattgccatcaagtccatgggcctcatcagcagtggagcctttgcc
acagcttccaaagctcacggtgaaggcctcaagagggcactgcaaggaaagctagcttcc
tttactgtggtagggtatgatcatgatggtgaacctcggttgtctggtggggacagtgtg
tctgttgtgcttatgagtccagatggtaaactgtctagtgcagatgtttctgaccaccaa
gatgggacttatacagtcagctatcttcctaagaatgaaggtgagctattgctgtcagtg
ctcatatgcaatcagcacattgagggaagtcccttcaaggtgatggtcaagtctggtcgc
agttacggaggtattggcttgccagttgcttcgtttggaggagagggtgatggtgatggg
caactctgtcggccttggggcatttgcgtggataaggaaggctatgtggtggtcgcggac
agaagcaacaaccgtgtgcagatcttcaagccttgcggcacgttccaccacaagtttggc
actttgggatcacgaccgggtcagttcgatcggccggccggtgtcgcttgcgacagccag
aggagaatcattgtggcagataaggacaatcaccgcatacagatcttcacctttgatggc
cagtttcttctcaaatttggtgagaaaggaaccaaaaatgggcagttcaactacccgtgg
gatgtggctgtcaactccgaggggaagatcctggtttcggatacacgcaaccaccgcgtg
caactctttgggcttgacgggacattcctcaacaaatacggcttcgagggtgccctctgg
aaacattttgactctcctcgtggtgtggccttcaatcaggaaggccaccttgtggtgacc
gatttcaacaatcatcggctgctcgtcattaggcctgactgccagtcagcacgcttcctc
gggtctgagggaaccggaaacgggcagttcttgcgcccacaaggtgtagcagtggaccag
gaggatcgtatcattgtggctgactcccgcaaccatcgcattcaggtgtttgaacccaat
ggcaactttttatgcaagtttggaactcacggtaacggctttggtcagatggatcgaccc
tcgggtatagcggttacgcctgatggaacgattgttgctgtggactttggaaacaaccga
atcctcatgttctga
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integrated database retrieval system
