Myxocyprinus asiaticus (Chinese sucker): 127453278
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Entry
127453278 CDS
T08782
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127453278
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
masi03310
]
127453278
Transcription factors [BR:
masi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127453278
Nuclear receptors [BR:
masi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127453278
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127453278
NCBI-ProteinID:
XP_051575477
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Position
15:33251029..33312342
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AA seq
506 aa
AA seq
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MENDEPESPDQNNVNTQTRGNPVPKKPHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGF
FRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSL
FAEVERHRQQQRFQGNSVQEPQPLPAYRPSKEPREQSSHLIPTLPPAYPYSVEPELPGCP
PEVHPYLECRRSEAQAPGLACRGSHRRGESNSLTAGRGFDSTRSTPEAILNMPGSEMGFR
PFDPESSFFGYSTSLHIEELCASIVRSHRETTQYRPEEVQSLRWKVFSREEIHAYQSKSV
DEMWQHCAVQLTDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNTEN
NTVFFDGKFAGTELFKSLACSDLIAAVFDFAHNLCALRLTEQQMAVFSALVLINADRPCL
EDRERVQRVRRDVELALSHILHRDNQESLLLKLYQRVPVLKSLCAQHIEKLRWFRQLYPL
TVHSLFPPLYKELFGFDTDIQTLATH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgacgaacccgaatcgccggaccagaacaatgtcaacactcagactagagga
aatcctgtgcccaagaaaccccatctaactcagatagaggtgatcccatgtaagatctgt
ggagataagtcatcaggtgttcattatggagttatcacttgtgagggttgcaaggggttc
ttccgcagaagtcagtcctccagtgtgcagtattcatgttccaggcagagtaactgtcct
attgaccgcgccagccgcaaccgctgccagagctgccgacttaaaaaatgtgttgctcag
ggcatgagccgcgacgcggtgaagtttggtcgcatgtccaagcgtcagagagactcgctg
tttgcagaagttgagagacaccggcagcagcagcgttttcagggcaactcagttcaagaa
ccccagcctctaccagcctaccggcccagcaaagagcccagagaacagtcatcacatctc
attcctactctgcctccagcctacccctattctgtggagcctgaactgccaggctgtcca
ccagaggtgcatccatacctggagtgtcgcagaagcgaggcccaggctcctggtctggcc
tgcaggggctcccacaggaggggtgagagcaacagcctgacagctggtagaggctttgac
tccacaaggtctacaccagaggccatcctaaacatgccaggtagtgaaatggggtttcga
ccttttgaccctgagagctcgttttttggctactcaacctctctgcacatagaggagctt
tgtgcgagtattgtgcgttcccacagagagacgactcagtatcgtccagaggaggtgcag
tctctcagatggaaggttttcagcagggaggagatccatgcttaccagagcaagtcggtg
gatgagatgtggcagcactgtgcagtgcagctgactgatgccgttcagtacgtggtggaa
tttgctaaacgtatcccaggattccgtcagctctgtcagaatgatcaaattgctctgctc
aagagtgggtccatggaagtggttctggtccggatgagtcggatgtttaacacggaaaac
aacacagtattcttcgatggcaaatttgcaggaacagaacttttcaaatctcttgcatgt
agtgatctaatagctgctgtatttgacttcgctcacaatctatgtgcgctgagactgact
gaacagcagatggcggtgtttagcgcacttgtcctcatcaacgcagatcggccgtgtctg
gaagacagagaaagagtgcagagagtaaggagagatgtggagcttgccctgagtcacatc
ctgcacagagacaatcaggagagtctactgcttaagttgtaccagagggtgccggtgttg
aagtctctgtgtgcacagcatattgagaaactgcggtggttccgtcagctgtacccactc
actgtgcattccctcttccctccgctgtacaaagagctgttcggctttgacacagatata
cagacactggctactcactga
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